Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.6e-194 682.6 343 100.0
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.1e-153 547.0 348 81.9
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 3.6e-146 521.9 341 78.0
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 4.7e-146 521.5 344 77.9
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 9.6e-131 470.7 318 77.4
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.4e-129 466.1 345 69.6
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 1.7e-127 459.9 340 71.8
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 3.8e-127 458.8 328 73.8
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 4.9e-127 458.4 345 69.6
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 7.9e-125 451.1 345 69.3
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 1.2e-120 437.2 392 61.0
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 7.6e-120 434.5 344 66.3
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 9.9e-120 434.1 351 65.2
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 3.8e-119 432.2 374 64.4
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 3.5e-117 425.6 351 66.1
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 3.0e-116 422.5 353 66.6
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 1.9e-115 419.9 357 62.5
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 3.3e-115 419.1 346 65.6
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 1.4e-113 413.7 348 62.6
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 4.0e-113 412.1 344 64.8
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 5.3e-113 411.8 346 63.9
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 1.5e-112 410.2 375 61.6
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 3.4e-112 409.1 345 64.9
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 6.5e-111 404.8 358 62.0
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 2.5e-110 402.9 451 52.3
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 4.2e-110 402.1 350 62.3
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 7.1e-110 401.4 323 66.9
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 2.1e-109 399.8 346 63.9
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 2.7e-109 399.4 391 56.8
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 1.0e-108 397.5 461 52.3
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 1.0e-108 397.5 344 61.6
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 2.3e-108 396.4 330 63.0
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 6.7e-108 394.8 483 49.5
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 1.1e-107 394.0 393 54.7
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 1.9e-107 393.3 346 63.0
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 9.7e-107 391.0 317 67.5
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 4.8e-106 388.7 458 50.4
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.4e-105 387.1 451 52.1
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 2.4e-105 386.3 347 60.8
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 3.1e-105 386.0 358 61.7
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 4.1e-105 385.6 473 50.5
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 5.3e-105 385.2 277 73.6
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 5.3e-105 385.2 433 51.3
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.0e-104 383.3 327 64.8
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 2.6e-104 382.9 411 53.5
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 7.7e-104 381.3 440 50.7
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 1.3e-103 380.6 484 49.0
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 1.3e-103 380.6 432 51.9
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 6.5e-103 378.3 302 64.2
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 8.5e-103 377.9 443 49.2
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.4e-102 377.1 452 48.7
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.5e-102 376.3 452 48.7
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 2.5e-102 376.3 381 56.7
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 3.6e-101 372.5 359 58.8
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 1.4e-100 370.5 499 46.9
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.8e-100 370.2 400 52.2
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 6.7e-100 368.2 432 51.9
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 1.5e-99 367.1 442 49.5
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 3.3e-99 365.9 475 46.3
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 5.7e-99 365.2 499 46.7
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 9.7e-99 364.4 522 44.1
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 1.3e-98 364.0 436 50.7
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 1.3e-98 364.0 516 45.9
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.8e-98 362.8 479 47.2
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 8.2e-98 361.3 496 45.6
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.1e-97 360.9 488 46.7
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 2.4e-97 359.8 487 46.6
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.4e-97 359.8 497 45.9
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 5.3e-97 358.6 357 58.0
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.0e-96 356.7 487 46.4
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 3.4e-96 355.9 414 50.0
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 1.0e-95 354.4 278 64.0
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 8.5e-95 351.3 329 59.9
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 5.5e-94 348.6 427 50.4
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.6e-93 347.1 471 46.7
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 6.1e-93 345.1 343 56.6
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.9e-92 342.4 472 45.8
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 7.4e-91 338.2 478 44.1
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 9.7e-91 337.8 415 50.6
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 8.2e-90 334.7 488 44.5
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 1.4e-89 334.0 456 46.5
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 1.8e-89 333.6 508 42.1
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 3.1e-89 332.8 495 44.4
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 5.3e-89 332.0 424 48.6
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 1.3e-87 327.4 377 50.9
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 1.3e-87 327.4 377 50.9
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 1.7e-87 327.0 311 55.0
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 1.4e-84 317.4 408 48.8
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 1.5e-83 313.9 408 48.5
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 3.3e-83 312.8 409 47.9
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 1.1e-81 307.8 437 44.6
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 1.1e-81 307.8 409 46.9
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 9.1e-81 304.7 451 41.9
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 3.5e-80 302.8 408 45.8
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 1.0e-79 301.2 352 53.4
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 5.0e-79 298.9 429 45.2
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 1.1e-78 297.7 430 45.6
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 2.1e-77 293.5 298 52.0
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 2.7e-77 293.1 440 43.6
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 1.8e-76 290.4 428 44.4
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 8.8e-76 288.1 409 46.0
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 4.8e-74 282.3 455 41.3
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 7.0e-73 278.5 401 45.9
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 2.7e-72 276.6 576 34.2
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 1.3e-71 274.2 456 41.7
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 1.3e-71 274.2 454 41.4
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 2.5e-70 270.0 486 37.4
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 5.5e-70 268.9 495 37.0
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 5.5e-70 268.9 495 37.0
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 2.1e-69 266.9 581 33.7
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 6.1e-69 265.4 310 51.0
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 6.1e-69 265.4 373 45.8
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 1.8e-68 263.8 374 44.4
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.0e-68 263.1 480 39.2
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.3e-66 257.7 308 53.2
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 1.7e-66 257.3 443 40.0
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 3.7e-66 256.1 378 44.4
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 7.2e-62 241.9 359 44.6
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 5.2e-60 235.7 314 46.8
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 1.8e-57 227.3 357 41.7
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 2.0e-56 223.8 142 77.5
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.8e-53 213.4 149 73.8
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.1e-49 201.4 141 71.6
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 4.1e-49 199.5 217 53.0
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.4e-43 179.9 448 34.6
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 6.8e-36 155.6 113 70.8
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 1.5e-35 154.5 206 50.5
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 1.2e-29 134.8 348 30.5
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 9.9e-27 125.2 75 82.7
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 1.7e-23 114.4 79 73.4
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 3.1e-20 103.6 327 30.6
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 2.3e-15 87.4 161 37.9
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 4.3e-14 83.2 153 36.6


User provided reference genes

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