Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012027 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D014145 6.7e-79 297.4 157 100.0
QL09p000200 Quercus lobata HOM05D010675 ORTHO05D014145 2.3e-18 96.3 70 68.6
QL03p000458 Quercus lobata HOM05D010675 ORTHO05D014145 1.9e-17 93.2 69 68.1
QL10p016783 Quercus lobata HOM05D010675 ORTHO05D014145 1.9e-17 93.2 69 68.1
QL05p061710 Quercus lobata HOM05D010675 ORTHO05D014145 1.6e-16 90.1 69 66.7
ClCG02G005310 Citrullus lanatus HOM05D004755 ORTHO05D006137 1.1e-12 77.4 122 39.3
Sabra04G0100200 Salix brachista HOM05D004755 ORTHO05D006137 8.6e-10 67.8 60 56.7
Oeu010556.1 Olea europaea HOM05D004755 ORTHO05D006137 5.6e-09 65.1 35 82.9
CSS0024470 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 7.3e-09 64.7 58 69.0
CSS0003833 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 1.6e-08 63.5 30 96.7
CSS0019785 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 1.6e-08 63.5 30 96.7
Haze_02419 Corylus avellana HOM05D004755 ORTHO05D006137 1.6e-08 63.5 50 66.0
CSS0000457 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 2.8e-08 62.8 57 66.7
CSS0007838 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 2.8e-08 62.8 57 68.4
Nitab4.5_0004287g0030 Nicotiana tabacum HOM05D004755 ORTHO05D006137 2.8e-08 62.8 75 50.7
Dinv23556 Davidia involucrata HOM05D004755 ORTHO05D006137 3.6e-08 62.4 32 87.5
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 4.7e-08 62.0 68 60.3
Nitab4.5_0004280g0140 Nicotiana tabacum HOM05D004755 ORTHO05D006137 6.1e-08 61.6 75 49.3
Rhsim11G0173300 Rhododendron simsii HOM05D004755 ORTHO05D006137 8.0e-08 61.2 30 93.3
CAN.G572.59 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-07 60.8 75 49.3
Sc18g0004710 Simmondsia chinensis HOM05D004755 ORTHO05D006137 1.0e-07 60.8 35 80.0
CSS0024000 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 1.4e-07 60.5 57 68.4
SalBow6G1464 Salvia bowleyana HOM05D004755 ORTHO05D006137 1.4e-07 60.5 35 80.0
Sabra09G0085600 Salix brachista HOM05D004755 ORTHO05D006137 1.8e-07 60.1 32 81.2
Actinidia00497 Actinidia chinensis HOM05D004755 ORTHO05D006137 3.0e-07 59.3 31 83.9
CSS0002516 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 3.0e-07 59.3 57 66.7
CSS0037793 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 3.0e-07 59.3 58 67.2
vmacro02143 Vaccinium macrocarpon HOM05D004755 ORTHO05D006137 4.0e-07 58.9 30 90.0
CSS0018520 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 5.2e-07 58.5 58 62.1
Gohir.A04G117600 Gossypium hirsutum HOM05D004755 ORTHO05D006137 5.2e-07 58.5 27 92.6
Gohir.D04G159300 Gossypium hirsutum HOM05D004755 ORTHO05D006137 5.2e-07 58.5 27 92.6
Gorai.012G146700 Gossypium raimondii HOM05D004755 ORTHO05D006137 5.2e-07 58.5 27 92.6
Hma1.2p1_0066F.1_g036750 Hydrangea macrophylla HOM05D004755 ORTHO05D006137 6.8e-07 58.2 30 83.3
CSS0034897 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 8.9e-07 57.8 58 62.1
Potri.009G112184 Populus trichocarpa HOM05D004755 ORTHO05D006137 8.9e-07 57.8 31 80.6
Potri.T125104 Populus trichocarpa HOM05D004755 ORTHO05D006137 8.9e-07 57.8 31 80.6
unitig_746.g26712 Utricularia gibba HOM05D004755 ORTHO05D006137 1.2e-06 57.4 34 73.5
CSS0010447 Camellia sinensis var. sinensis HOM05D000740 ORTHO05D014145 1.5e-06 57.0 70 55.7
QL11p042321 Quercus lobata HOM05D004755 ORTHO05D006137 1.5e-06 57.0 69 46.4
Cc02_g17900 Coffea canephora HOM05D004755 ORTHO05D006137 2.0e-06 56.6 31 80.6
Manes.17G099000 Manihot esculenta HOM05D004755 ORTHO05D006137 2.0e-06 56.6 30 83.3
Hund06220 Selenicereus undatus HOM05D004755 ORTHO05D006137 2.0e-06 56.6 75 41.3
SEGI_07035 Sequoiadendron giganteum HOM05D004755 ORTHO05D014145 2.0e-06 56.6 48 50.0
Thecc.02G121800 Theobroma cacao HOM05D004755 ORTHO05D006137 2.0e-06 56.6 27 88.9
EL10Ac9g21762 Beta vulgaris HOM05D004755 ORTHO05D006137 4.4e-06 55.5 35 65.7
TWI75G0180 Tripterygium wilfordii HOM05D004755 ORTHO05D006137 4.4e-06 55.5 27 88.9
AL3G32250 Arabidopsis lyrata HOM05D004755 ORTHO05D006137 9.8e-06 54.3 32 71.9
BcaC01g03670 Brassica carinata HOM05D004755 ORTHO05D006137 9.8e-06 54.3 94 36.2
CiPaw.05G060900 Carya illinoinensis HOM05D004755 ORTHO05D006137 9.8e-06 54.3 27 88.9
Potri.004G150700 Populus trichocarpa HOM05D004755 ORTHO05D006137 9.8e-06 54.3 31 71.0
SHI05426 Sapria himalayana HOM05D004755 ORTHO05D006137 9.8e-06 54.3 37 59.5
VMungo1127G1904 Vigna mungo HOM05D004755 ORTHO05D006137 9.8e-06 54.3 27 81.5


User provided reference genes

Program Settings