Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 9.9e-104 380.2 200 100.0
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 9.9e-104 380.2 200 100.0
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 1.3e-74 283.5 185 79.5
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 4.1e-73 278.5 187 75.9
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 2.0e-72 276.2 181 78.5
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 5.9e-72 274.6 182 76.4
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 1.7e-71 273.1 187 73.8
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 1.7e-71 273.1 175 79.4
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 2.9e-71 272.3 187 73.8
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 5.0e-71 271.6 185 76.8
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 6.5e-71 271.2 178 75.8
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 8.5e-71 270.8 187 73.8
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.1e-70 270.4 187 73.8
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.9e-70 269.6 187 73.8
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 3.2e-70 268.9 182 75.8
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 3.2e-70 268.9 186 72.6
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 4.2e-70 268.5 182 75.3
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 7.2e-70 267.7 182 75.3
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 7.2e-70 267.7 181 74.6
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 2.1e-69 266.2 192 71.9
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 2.7e-69 265.8 186 76.3
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 6.1e-69 264.6 180 75.0
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 2.3e-68 262.7 180 76.1
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 5.2e-68 261.5 192 72.9
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 3.3e-67 258.8 160 82.5
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 2.2e-66 256.1 184 71.7
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 2.8e-66 255.8 176 72.7
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 2.8e-66 255.8 168 73.8
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 4.8e-66 255.0 181 72.4
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 1.8e-65 253.1 180 69.4
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 1.8e-65 253.1 181 70.7
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.6e-64 250.0 180 71.1
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 1.3e-63 246.9 175 71.4
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 1.7e-63 246.5 180 68.9
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 2.9e-63 245.7 192 66.1
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 2.9e-63 245.7 186 68.3
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 1.5e-62 243.4 180 68.3
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 5.5e-62 241.5 180 66.7
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 7.2e-62 241.1 180 66.1
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 2.3e-60 236.1 180 67.2
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 4.0e-60 235.3 178 68.0
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 1.5e-59 233.4 180 66.1
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 2.6e-59 232.6 166 71.1
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 7.5e-59 231.1 182 64.3
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 9.7e-59 230.7 170 71.2
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 1.7e-58 229.9 174 67.2
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 2.2e-58 229.6 182 64.3
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 8.2e-58 227.6 182 63.7
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.1e-57 227.3 182 63.2
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 1.1e-57 227.3 181 66.3
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 3.1e-57 225.7 181 63.5
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 5.3e-57 224.9 177 63.3
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 9.1e-57 224.2 181 61.3
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 9.1e-57 224.2 181 61.3
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 1.6e-56 223.4 179 63.1
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 1.6e-56 223.4 175 64.6
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 2.0e-56 223.0 159 71.7
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.7e-56 222.6 154 71.4
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 3.5e-56 222.2 181 61.9
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 3.5e-56 222.2 172 63.4
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 3.5e-56 222.2 176 65.3
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 5.9e-56 221.5 181 60.2
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 7.7e-56 221.1 179 62.6
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 2.9e-55 219.2 172 62.8
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 3.8e-55 218.8 155 72.3
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 5.0e-55 218.4 176 63.1
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 6.5e-55 218.0 175 62.3
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 8.5e-55 217.6 175 65.7
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 1.5e-54 216.9 184 61.4
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 1.9e-54 216.5 175 61.1
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 1.9e-54 216.5 171 65.5
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 2.7e-53 212.6 172 62.2
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 3.6e-53 212.2 171 60.8
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 3.6e-53 212.2 177 61.6
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 4.7e-53 211.8 188 58.0
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 1.0e-52 210.7 169 62.1
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 3.0e-52 209.1 159 64.2
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 4.0e-52 208.8 174 59.2
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 4.0e-52 208.8 174 60.3
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 1.2e-51 207.2 170 63.5
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 1.5e-51 206.8 179 57.0
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 1.5e-51 206.8 182 56.6
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 2.6e-51 206.1 141 70.9
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 4.4e-51 205.3 155 67.7
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.7e-50 203.4 174 58.0
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 2.0e-48 196.4 171 58.5
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 1.5e-46 190.3 191 56.5
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 2.5e-46 189.5 191 55.5
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 1.4e-44 183.7 133 69.2
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 8.9e-44 181.0 139 66.2
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.1e-41 174.1 140 63.6
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 3.5e-40 169.1 132 62.9
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 5.9e-40 168.3 191 49.2
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 1.0e-39 167.5 175 52.0
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 2.3e-39 166.4 130 63.1
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 1.9e-38 163.3 122 64.8
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 4.3e-38 162.2 180 46.7
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 4.3e-38 162.2 130 61.5
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 2.8e-37 159.5 129 63.6
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 1.0e-36 157.5 196 44.9
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 3.0e-36 156.0 98 77.6
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 2.9e-34 149.4 103 74.8
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 2.3e-31 139.8 155 47.7
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 8.3e-26 121.3 152 48.0
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 1.1e-25 120.9 128 52.3
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 7.3e-22 108.2 175 37.7
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 4.7e-21 105.5 184 39.7
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 8.1e-21 104.8 107 52.3
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 1.4e-20 104.0 156 39.7
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 7.5e-19 98.2 170 35.3
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 7.1e-17 91.7 132 42.4
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 9.2e-17 91.3 156 34.6
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 9.5e-14 81.3 164 34.8
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 1.6e-13 80.5 59 66.1
Zm00001eb177740 Zea mays HOM05D002799 ORTHO05D008889 1.9e-06 57.0 41 56.1


User provided reference genes

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