Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.0e-96 355.1 175 100.0
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.8e-78 295.4 202 77.2
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-69 266.9 166 83.1
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.0e-65 250.8 193 71.5
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-64 249.2 206 68.9
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-63 244.6 193 70.5
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-60 236.9 193 68.9
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.1e-53 211.8 198 59.1
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.4e-53 211.5 199 57.8
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.6e-52 209.9 203 56.7
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.7e-52 209.1 201 57.2
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-48 196.4 199 56.3
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-46 189.9 99 89.9
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.7e-33 145.2 154 53.2
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-31 140.6 184 48.4
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-30 137.1 174 47.7
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.2e-29 132.5 159 52.8
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.0e-29 131.3 145 59.3
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.5e-26 122.9 110 57.3
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 3.1e-16 89.4 153 43.8
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.2e-14 83.2 149 43.6
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 1.7e-11 73.6 128 38.3
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 1.5e-10 70.5 106 41.5
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.9e-10 70.1 89 39.3
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 5.6e-10 68.6 117 38.5
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 5.6e-10 68.6 117 38.5
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 1.2e-09 67.4 89 39.3
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 1.2e-09 67.4 117 37.6
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 1.6e-09 67.0 103 38.8
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 6.2e-09 65.1 89 38.2
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 6.2e-09 65.1 110 34.5
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 8.1e-09 64.7 103 37.9
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 1.4e-08 63.9 116 32.8
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 1.4e-08 63.9 101 34.7
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 1.8e-08 63.5 107 42.1
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.4e-08 63.2 104 38.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.4e-08 63.2 99 39.4
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 4.0e-08 62.4 104 30.8
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 8.9e-08 61.2 99 42.4
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.2e-07 60.8 121 36.4
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.8e-07 58.5 109 42.2
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.8e-07 58.5 109 41.3
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.7e-06 57.0 109 41.3
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 2.9e-06 56.2 96 37.5
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.8e-06 55.8 94 37.2


User provided reference genes

Program Settings