Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 3.0e-111 405.2 205 100.0
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.7e-66 256.5 198 72.2
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 2.6e-59 232.6 197 64.0
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 2.6e-59 232.6 197 64.0
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.5e-54 216.9 175 65.1
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.5e-54 216.9 175 65.1
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 9.7e-46 187.6 181 57.5
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 2.8e-45 186.0 199 53.3
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 4.8e-45 185.3 189 55.0
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 4.5e-43 178.7 190 53.2
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 4.2e-41 172.2 191 49.2
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 2.1e-40 169.9 191 48.7
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 1.4e-39 167.2 188 52.1
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 2.3e-39 166.4 191 49.7
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 5.2e-39 165.2 188 50.0
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 6.7e-39 164.9 197 46.7
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 4.4e-38 162.2 204 46.6
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 4.4e-38 162.2 188 49.5
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.3e-37 160.6 197 49.2
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 1.7e-37 160.2 197 50.8
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 3.7e-37 159.1 190 48.4
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 4.8e-37 158.7 189 48.7
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 5.3e-36 155.2 191 47.1
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 7.0e-36 154.8 188 45.7
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 9.1e-36 154.5 150 58.0
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 1.6e-35 153.7 193 47.2
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 1.6e-35 153.7 191 47.6
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 2.0e-35 153.3 195 47.2
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 2.0e-35 153.3 194 46.4
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 2.6e-35 152.9 191 46.6
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 2.6e-35 152.9 189 47.1
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 7.7e-35 151.4 203 45.8
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 1.3e-34 150.6 190 44.7
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.7e-34 150.2 191 50.3
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 1.7e-34 150.2 187 45.5
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 2.2e-34 149.8 188 45.2
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 2.2e-34 149.8 189 46.6
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 1.1e-33 147.5 188 44.7
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 1.1e-33 147.5 194 45.4
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 2.5e-33 146.4 181 51.4
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 5.5e-33 145.2 188 45.7
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 9.4e-33 144.4 190 46.3
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 1.2e-32 144.1 187 46.0
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.6e-32 143.7 181 48.6
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 2.7e-32 142.9 190 44.2
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.7e-32 142.9 181 49.2
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 2.7e-32 142.9 185 45.4
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 6.1e-32 141.7 188 44.7
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 1.4e-31 140.6 186 45.2
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.4e-31 140.6 181 48.6
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 1.8e-31 140.2 181 48.6
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.0e-31 139.0 181 47.5
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 1.2e-30 137.5 168 48.8
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.2e-30 137.5 196 43.4
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 1.2e-30 137.5 192 43.2
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 2.0e-30 136.7 173 46.8
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 1.7e-29 133.7 187 45.5
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 1.7e-29 133.7 195 43.6
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 1.7e-29 133.7 188 44.1
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 3.7e-29 132.5 189 45.0
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 7.0e-28 128.3 188 42.6
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 9.1e-28 127.9 165 45.5
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.6e-27 127.1 219 39.3
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 2.0e-27 126.7 191 43.5
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 2.7e-27 126.3 177 45.8
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 2.7e-27 126.3 188 42.0
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 5.9e-27 125.2 146 44.5
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 1.3e-26 124.0 197 40.1
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.8e-26 122.5 146 45.2
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 5.0e-26 122.1 191 40.8
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 1.9e-25 120.2 165 46.1
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.9e-25 120.2 201 38.8
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 2.7e-24 116.3 178 39.3
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 3.0e-23 112.8 203 37.9
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 5.2e-23 112.1 187 40.6
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 8.8e-23 111.3 187 39.6
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 2.0e-22 110.2 189 38.6
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 3.4e-22 109.4 203 37.9
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 3.4e-22 109.4 172 36.6
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 4.4e-22 109.0 112 50.0
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 5.7e-22 108.6 168 44.0
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 7.5e-22 108.2 190 36.8
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 9.8e-22 107.8 106 51.9
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 8.3e-21 104.8 188 36.2
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 1.4e-20 104.0 190 34.2
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 1.8e-20 103.6 171 36.3
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 1.2e-19 100.9 197 37.1
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 2.7e-19 99.8 212 34.4
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 3.5e-19 99.4 183 39.3
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 2.3e-18 96.7 223 33.2
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 3.8e-18 95.9 116 42.2
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 3.8e-18 95.9 116 42.2
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 8.6e-18 94.7 189 33.9
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 1.1e-17 94.4 187 38.0
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 1.5e-17 94.0 148 37.2
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 1.5e-17 94.0 148 37.2
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 1.5e-17 94.0 148 37.2
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 1.8e-15 87.0 187 33.7
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 2.2e-13 80.1 86 46.5
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 2.2e-13 80.1 171 35.7
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 9.2e-12 74.7 186 30.1
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.6e-11 73.9 102 48.0
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 2.0e-11 73.6 58 53.4
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 1.0e-07 61.2 70 41.4
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 3.0e-07 59.7 191 29.3
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 9.8e-06 54.7 182 26.9


User provided reference genes

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