Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011907 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.8e-145 519.2 258 100.0
CSS0047049 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.2e-125 453.4 258 89.9
CSS0049081 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 2.1e-90 336.3 251 74.1
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 2.6e-48 196.4 201 59.2
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 2.6e-48 196.4 201 59.2
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 2.6e-48 196.4 201 59.2
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 4.5e-48 195.7 201 58.7
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-40 169.9 172 57.6
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-37 161.0 280 38.6
CSS0046298 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 2.4e-33 146.7 101 76.2
CSS0043144 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.0e-28 131.3 239 38.5
CSS0047175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-27 125.6 298 33.2
vmacro05503 Vaccinium macrocarpon HOM05D002996 ORTHO05D004756 5.7e-27 125.6 107 61.7
CSS0020284 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-26 123.2 288 33.3
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 1.1e-22 111.3 95 56.8
CSS0034688 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.4e-22 108.2 105 52.4
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-21 107.8 108 52.8
CSS0002158 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.6e-21 107.5 91 57.1
CSS0049897 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.1e-21 107.1 89 58.4
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 3.6e-21 106.3 100 56.0
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-21 106.3 108 51.9
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.0e-20 104.8 92 55.4
CSS0050464 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.0e-20 103.2 100 53.0
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 3.0e-20 103.2 92 55.4
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 4.0e-20 102.8 92 54.3
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 4.0e-20 102.8 108 50.9
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 5.2e-20 102.4 92 56.5
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-20 102.1 108 50.9
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-20 101.7 92 55.4
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-20 101.7 108 50.0
COL.COLO4_28935 Corchorus olitorius HOM05D007230 ORTHO05D004756 1.1e-19 101.3 90 54.4
SHI05604 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-19 101.3 106 50.0
CSS0037656 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-19 100.9 89 55.1
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-19 100.1 92 54.3
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-19 99.4 92 54.3
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 4.4e-19 99.4 92 54.3
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 5.7e-19 99.0 92 53.3
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 7.5e-19 98.6 92 54.3
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-19 98.6 92 53.3
SHI45992 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-19 98.6 97 53.6
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 1.3e-18 97.8 92 53.3
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 2.2e-18 97.1 92 53.3
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 2.2e-18 97.1 92 54.3
Aqoxy5G03695 Aquilegia oxysepala HOM05D000002 ORTHO05D004756 1.1e-17 94.7 98 52.0
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-17 94.7 81 58.0
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 1.1e-17 94.7 91 51.6
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 4.1e-17 92.8 91 56.0
Ca_20123_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 7.0e-17 92.0 104 45.2
SHI11549 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-16 91.3 81 56.8
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-16 90.5 89 53.9
CSS0047076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 5.9e-16 89.0 231 32.0
CSS0040816 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-16 88.6 84 50.0
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 7.7e-16 88.6 86 50.0
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 7.7e-16 88.6 102 49.0
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-16 88.6 79 55.7
SHI31302 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-15 88.2 89 52.8
PSO017G2245 Papaver somniferum HOM05D000002 ORTHO05D000001 2.9e-15 86.7 84 48.8
SHI09801 Sapria himalayana HOM05D007230 ORTHO05D004756 5.0e-15 85.9 89 51.7
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 6.5e-15 85.5 73 58.9
SHI45862 Sapria himalayana HOM05D007230 ORTHO05D004756 6.5e-15 85.5 73 58.9
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.1e-14 84.7 107 40.2
SHI03218 Sapria himalayana HOM05D007230 ORTHO05D004756 1.5e-14 84.3 73 58.9
PSO675G6160 Papaver somniferum HOM05D000002 ORTHO05D004756 1.9e-14 84.0 203 32.5
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.5e-14 83.6 107 39.3
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.5e-14 83.6 107 39.3
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.5e-14 83.6 107 39.3
Ca_07474_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 3.2e-14 83.2 87 47.1
SHI11692 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-14 83.2 73 57.5
SHI20212 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-14 83.2 73 58.9
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-14 83.2 73 57.5
SHI36442 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-14 83.2 89 51.7
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-14 83.2 73 57.5
PSO063G0989 Papaver somniferum HOM05D007230 ORTHO05D004756 7.2e-14 82.0 84 45.2
Potri.013G133550 Populus trichocarpa HOM05D010459 ORTHO05D004756 9.4e-14 81.6 96 49.0
SHI11999 Sapria himalayana HOM05D000002 ORTHO05D000001 9.4e-14 81.6 89 49.4
SHI35844 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-13 80.5 73 56.2
Hma1.2p1_1655F.1_g295950 Hydrangea macrophylla HOM05D007230 ORTHO05D004756 2.7e-13 80.1 116 38.8
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.7e-13 80.1 95 42.1
SHI30744 Sapria himalayana HOM05D000002 ORTHO05D004756 2.7e-13 80.1 78 53.8
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 3.6e-13 79.7 106 43.4
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 4.7e-13 79.3 157 32.5
vmacro04005 Vaccinium macrocarpon HOM05D006655 ORTHO05D007986 8.0e-13 78.6 118 41.5
Ca_27664_v3 Cicer arietinum L. HOM05D000002 ORTHO05D004756 1.4e-12 77.8 81 48.1
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-12 77.8 99 35.4
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-12 77.4 99 35.4
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-12 77.4 99 35.4
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-12 77.4 99 35.4
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.0e-12 76.6 89 42.7
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 4.0e-12 76.3 100 44.0
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.8e-12 75.5 82 45.1
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 8.8e-12 75.1 99 34.3
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 8.8e-12 75.1 97 40.2
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-11 74.7 99 34.3
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 1.5e-11 74.3 99 34.3
PSO170G3518 Papaver somniferum HOM05D007230 ORTHO05D004756 2.0e-11 73.9 88 45.5
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-11 71.6 66 54.5
CSS0029026 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-10 70.9 82 51.2
Manes.14G134321 Manihot esculenta HOM05D007230 ORTHO05D004756 2.2e-10 70.5 82 41.5
Rhsim11G0089400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.2e-10 70.5 82 43.9
TPR.G13973 Trifolium pratense HOM05D007230 ORTHO05D004756 2.2e-10 70.5 63 54.0
TPR.G39545 Trifolium pratense HOM05D007230 ORTHO05D004756 2.8e-10 70.1 75 48.0
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-10 69.7 89 34.8
TWI12G0087 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 4.8e-10 69.3 95 34.7
TWI12G0354 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 4.8e-10 69.3 95 34.7
TWI12G0323 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 6.3e-10 68.9 95 34.7
TWI14G0706 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 6.3e-10 68.9 95 34.7
TWI38G1548 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 6.3e-10 68.9 95 34.7
TWI73G1000 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 6.3e-10 68.9 95 34.7
TWI75G1724 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 6.3e-10 68.9 95 34.7
CSS0048984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.3e-10 68.6 144 37.5
Ca_02897_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.3e-10 68.6 64 54.7
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 1.4e-09 67.8 52 65.4
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.4e-09 67.8 97 38.1
TWI77G0375 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 1.4e-09 67.8 95 34.7
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.8e-09 67.4 97 37.1
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-09 67.0 63 54.0
CSS0018470 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 4.1e-09 66.2 81 46.9
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-09 65.9 52 63.5
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-09 65.9 52 63.5
TWI73G0658 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 5.4e-09 65.9 113 32.7
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 7.0e-09 65.5 78 46.2
TWI59G1424 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 9.1e-09 65.1 91 34.1
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 2.0e-08 63.9 101 30.7
TWI59G1050 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 2.0e-08 63.9 91 33.0
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-08 63.5 100 33.0
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-08 63.5 133 30.1
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-08 63.5 100 33.0
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-08 63.5 100 33.0
CSS0050399 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 5.9e-08 62.4 69 47.8
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 5.9e-08 62.4 54 57.4
QL09p018296 Quercus lobata HOM05D000002 ORTHO05D000001 7.7e-08 62.0 100 32.0
Hma1.2p1_0827F.1_g225000 Hydrangea macrophylla HOM05D007230 ORTHO05D004756 1.3e-07 61.2 63 47.6
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 1.3e-07 61.2 73 46.6
Psat1g216160 Pisum sativum HOM05D010459 ORTHO05D004756 2.2e-07 60.5 63 47.6
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-07 60.5 100 32.0
vmacro14292 Vaccinium macrocarpon HOM05D000402 ORTHO05D000263 5.0e-07 59.3 77 48.1
CSS0022001 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-07 58.9 41 68.3
Atru.chr3.2571 Acer truncatum HOM05D000002 ORTHO05D004756 1.1e-06 58.2 111 36.9
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 1.1e-06 58.2 49 57.1
CSS0013612 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 57.4 41 65.9
CSS0033338 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 57.4 41 65.9
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 2.5e-06 57.0 119 32.8
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 3.2e-06 56.6 82 34.1
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 4.2e-06 56.2 83 37.3
Sopen05g015630 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.8 126 27.8
COL.COLO4_09335 Corchorus olitorius HOM05D007230 ORTHO05D004756 7.2e-06 55.5 76 36.8
PSO675G4469 Papaver somniferum HOM05D000002 ORTHO05D000001 7.2e-06 55.5 82 39.0
PGR083G0605 Punica granatum HOM05D000002 ORTHO05D000047 7.2e-06 55.5 94 35.1
CSS0016191 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-06 55.1 41 63.4
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 9.4e-06 55.1 83 36.1
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 9.4e-06 55.1 83 36.1
Sopen06g033740 Solanum pennellii HOM05D000002 ORTHO05D000001 9.4e-06 55.1 126 24.6


User provided reference genes

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