Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 4.7e-163 577.8 292 100.0
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 2.2e-128 462.6 288 84.0
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 4.2e-127 458.4 291 81.8
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 2.8e-123 445.7 279 80.6
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 4.8e-123 444.9 290 78.3
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 2.4e-122 442.6 280 80.7
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 5.3e-122 441.4 288 78.5
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 1.3e-120 436.8 287 78.0
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 4.2e-119 431.8 273 80.6
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 6.1e-118 427.9 278 76.6
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 3.3e-116 422.2 291 74.9
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 3.3e-116 422.2 273 76.6
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 1.7e-115 419.9 273 78.8
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 4.8e-115 418.3 292 72.3
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 6.3e-115 417.9 290 72.4
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 3.1e-114 415.6 276 77.9
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 6.9e-114 414.5 292 71.2
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 9.1e-114 414.1 289 73.4
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 1.2e-113 413.7 278 74.8
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 4.5e-113 411.8 281 74.7
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 5.9e-113 411.4 280 76.1
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 2.9e-112 409.1 258 78.7
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 3.8e-112 408.7 276 73.6
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 5.0e-112 408.3 272 75.4
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 2.5e-111 406.0 327 65.4
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 4.2e-111 405.2 276 73.2
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 5.5e-111 404.8 271 73.8
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 5.5e-111 404.8 272 72.8
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 1.2e-110 403.7 275 73.1
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 1.4e-109 400.2 279 74.2
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 3.9e-109 398.7 301 67.4
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 5.2e-109 398.3 238 87.0
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.1e-108 397.1 272 75.0
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.5e-108 396.7 280 71.1
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 1.7e-107 393.3 287 69.7
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 2.8e-107 392.5 287 69.7
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 3.7e-107 392.1 257 75.9
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 4.8e-107 391.7 251 76.5
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 4.8e-107 391.7 287 68.6
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 3.1e-106 389.0 291 67.7
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 3.1e-106 389.0 262 74.0
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 3.1e-106 389.0 284 68.0
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 3.1e-106 389.0 284 68.0
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 7.0e-106 387.9 291 67.7
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 7.0e-106 387.9 315 63.8
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 1.6e-105 386.7 277 71.8
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 5.9e-105 384.8 273 71.8
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 1.0e-104 384.0 280 68.2
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 1.3e-104 383.6 271 70.8
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 1.7e-104 383.3 260 74.6
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 2.2e-104 382.9 280 70.0
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.2e-104 382.9 279 68.1
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.8e-104 382.1 278 68.7
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 1.5e-103 380.2 278 69.8
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 4.2e-103 378.6 257 72.0
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 1.2e-102 377.1 285 69.5
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 3.6e-102 375.6 228 80.3
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 4.7e-102 375.2 281 66.9
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 4.7e-102 375.2 231 78.4
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 6.1e-102 374.8 234 77.4
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 8.0e-102 374.4 288 67.0
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 8.0e-102 374.4 290 65.9
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 1.0e-101 374.0 267 70.8
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 1.8e-101 373.2 265 69.4
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 4.0e-101 372.1 265 72.1
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 1.1e-100 370.5 288 66.3
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 1.5e-100 370.2 301 64.8
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 2.6e-100 369.4 291 65.6
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 3.3e-100 369.0 272 67.3
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 5.7e-100 368.2 285 66.0
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 7.5e-100 367.9 290 65.5
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 7.5e-100 367.9 287 66.9
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 8.2e-99 364.4 291 65.3
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 1.6e-97 360.1 230 77.0
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 2.2e-96 356.3 275 66.9
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 1.6e-94 350.1 228 74.6
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 3.6e-94 349.0 228 74.1
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 4.7e-94 348.6 252 68.3
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 8.0e-94 347.8 202 85.1
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.0e-93 347.4 228 72.8
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 6.8e-93 344.7 279 63.4
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 6.3e-91 338.2 272 61.8
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 2.2e-88 329.7 216 77.3
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 9.5e-87 324.3 214 72.0
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 2.1e-86 323.2 272 59.6
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 8.0e-86 321.2 231 70.6
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 4.4e-84 315.5 262 67.2
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 5.4e-82 308.5 204 76.5
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 9.5e-79 297.7 203 71.4
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 8.0e-78 294.7 203 71.9
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 1.4e-74 283.9 190 72.1
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.2e-73 280.8 180 73.9
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 1.6e-70 270.4 271 52.4
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 8.0e-70 268.1 217 66.8
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.3e-69 266.5 191 71.7
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 1.5e-68 263.8 272 52.6
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 2.9e-67 259.6 275 49.5
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 2.4e-66 256.5 246 52.4
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 9.5e-63 244.6 165 72.7
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 5.8e-60 235.3 244 50.4
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 2.4e-58 229.9 282 48.2
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 3.9e-56 222.6 291 50.5
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 1.6e-54 217.2 257 45.9
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 7.6e-52 208.4 134 76.9
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.7e-35 154.1 116 67.2
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 1.8e-32 144.1 177 44.6
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 3.8e-27 126.3 97 62.9
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 9.3e-26 121.7 97 63.9
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 5.1e-24 115.9 339 29.2
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 6.7e-24 115.5 299 31.4
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 2.6e-20 103.6 103 59.2
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 4.5e-20 102.8 102 59.8
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 7.6e-12 75.5 48 75.0
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 1.0e-11 75.1 82 56.1
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 1.4e-10 71.2 45 75.6
Haze_10306 Corylus avellana HOM05D000031 ORTHO05D001033 1.8e-08 64.3 50 72.0
Atru.chr5.1458 Acer truncatum HOM05D003798 ORTHO05D004652 3.9e-08 63.2 46 60.9
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 8.7e-08 62.0 56 50.0
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 1.5e-07 61.2 56 48.2
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 1.5e-07 61.2 56 48.2
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 3.3e-07 60.1 48 54.2


User provided reference genes

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