Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011845 Camellia sinensis var. sinensis HOM05D005464 ORTHO05D006803 9.7e-77 290.0 143 100.0
CSS0036664 Camellia sinensis var. sinensis HOM05D005464 ORTHO05D006803 6.3e-76 287.3 143 98.6
vmacro16896 Vaccinium macrocarpon HOM05D005464 ORTHO05D006803 5.5e-56 221.1 130 83.1
Actinidia15983 Actinidia chinensis HOM05D005464 ORTHO05D006803 7.2e-56 220.7 129 79.8
Rhsim12G0191100 Rhododendron simsii HOM05D005464 ORTHO05D006803 3.3e-53 211.8 127 82.7
TAR383G0924 Trochodendron aralioides HOM05D005464 ORTHO05D006803 2.7e-50 202.2 140 74.3
Lsat_1_v5_gn_4_89921 Lactuca sativa HOM05D005464 ORTHO05D006803 3.5e-50 201.8 141 72.3
PGR031G2541 Punica granatum HOM05D005464 ORTHO05D006803 3.5e-50 201.8 131 76.3
Cfa001959 Carpinus fangiana HOM05D005464 ORTHO05D006803 7.7e-50 200.7 137 75.9
CANSAT56G0380 Cannabis sativa HOM05D005464 ORTHO05D006803 2.2e-49 199.1 146 69.2
RcHm_v2.0_Chr2g0135251 Rosa chinensis HOM05D005464 ORTHO05D006803 2.2e-49 199.1 149 69.1
Haze_16562 Corylus avellana HOM05D005464 ORTHO05D006803 1.5e-48 196.4 142 71.1
MSTRG.22747 Avicennia marina HOM05D005464 ORTHO05D006803 2.5e-48 195.7 132 77.3
FAN09G2673 Fragaria x ananassa HOM05D005464 ORTHO05D006803 2.5e-48 195.7 150 67.3
FAN14G5059 Fragaria x ananassa HOM05D005464 ORTHO05D006803 2.5e-48 195.7 150 67.3
Manes.11G057000 Manihot esculenta HOM05D005464 ORTHO05D006803 2.5e-48 195.7 141 70.2
Atru.chr1.2934 Acer truncatum HOM05D005464 ORTHO05D006803 3.2e-48 195.3 135 71.1
ECA232G3027 Erigeron canadensis HOM05D005464 ORTHO05D006803 5.5e-48 194.5 136 74.3
Migut.I00762 Erythranthe guttata HOM05D005464 ORTHO05D006803 5.5e-48 194.5 130 76.2
TWI12G0099 Tripterygium wilfordii HOM05D005464 ORTHO05D006803 5.5e-48 194.5 143 67.1
FvH4_6g29660 Fragaria vesca HOM05D005464 ORTHO05D006803 9.4e-48 193.7 149 66.4
Eucgr.J03066 Eucalyptus grandis HOM05D005464 ORTHO05D006803 1.2e-47 193.4 130 75.4
Lj3g0027830 Lotus japonicus HOM05D005464 ORTHO05D006803 1.2e-47 193.4 136 70.6
Prupe.3G087600 Prunus persica HOM05D005464 ORTHO05D006803 1.6e-47 193.0 133 72.9
Sc06g0005900 Simmondsia chinensis HOM05D005464 ORTHO05D006803 6.1e-47 191.0 135 71.1
PGSC0003DMG400028509 Solanum tuberosum HOM05D005464 ORTHO05D006803 6.1e-47 191.0 136 70.6
Solyc06g068160.3 Solanum lycopersicum HOM05D005464 ORTHO05D006803 8.0e-47 190.7 131 72.5
DCAR_021346 Daucus carota HOM05D005464 ORTHO05D006803 1.0e-46 190.3 133 72.2
Medtr2g103910 Medicago truncatula HOM05D005464 ORTHO05D006803 1.0e-46 190.3 143 68.5
CiPaw.02G157400 Carya illinoinensis HOM05D005464 ORTHO05D006803 2.3e-46 189.1 141 70.9
Sopen06g025430 Solanum pennellii HOM05D005464 ORTHO05D006803 2.3e-46 189.1 131 71.8
Hund06557 Selenicereus undatus HOM05D005464 ORTHO05D006803 3.0e-46 188.7 128 73.4
SGA_v2.0_scaffold5G02698 Striga asiatica HOM05D005464 ORTHO05D006803 3.0e-46 188.7 132 72.0
MD17G1212300 Malus domestica HOM05D005464 ORTHO05D006803 5.2e-46 188.0 142 67.6
Ca_01055_v3 Cicer arietinum L. HOM05D005464 ORTHO05D006803 6.8e-46 187.6 133 70.7
HanXRQChr16g0500301 Helianthus annuus HOM05D005464 ORTHO05D006803 6.8e-46 187.6 142 69.7
Nitab4.5_0006769g0010 Nicotiana tabacum HOM05D005464 ORTHO05D006803 6.8e-46 187.6 137 70.1
FAN05G5161 Fragaria x ananassa HOM05D005464 ORTHO05D006803 8.8e-46 187.2 149 65.8
Nn8g39510 Nelumbo nucifera HOM05D005464 ORTHO05D006803 8.8e-46 187.2 124 73.4
Ciclev10026304m.g Citrus clementina HOM05D005464 ORTHO05D006803 1.2e-45 186.8 134 71.6
Cpa.g.sc10.270 Carica papaya HOM05D005464 ORTHO05D006803 1.5e-45 186.4 133 72.2
TPR.G37199 Trifolium pratense HOM05D005464 ORTHO05D006803 1.5e-45 186.4 147 66.7
VMungo1080G0510 Vigna mungo HOM05D005464 ORTHO05D006803 2.6e-45 185.7 130 70.8
Glyma.15G007300 Glycine max HOM05D005464 ORTHO05D006803 5.7e-45 184.5 130 70.8
CAN.G1503.8 Capsicum annuum HOM05D005464 ORTHO05D006803 7.5e-45 184.1 127 71.7
Psat5g302720 Pisum sativum HOM05D005464 ORTHO05D006803 7.5e-45 184.1 141 66.7
Glyma.13G365800 Glycine max HOM05D005464 ORTHO05D006803 1.3e-44 183.3 134 70.1
Nitab4.5_0000373g0080 Nicotiana tabacum HOM05D005464 ORTHO05D006803 1.3e-44 183.3 129 71.3
Sed0012798 Sechium edule HOM05D005464 ORTHO05D006803 1.3e-44 183.3 129 71.3
GSVIVG01017342001 Vitis vinifera HOM05D005464 ORTHO05D006803 1.7e-44 183.0 129 72.1
Phvul.005G178300 Phaseolus vulgaris HOM05D005464 ORTHO05D006803 2.2e-44 182.6 133 70.7
ClCG07G012450 Citrullus lanatus HOM05D005464 ORTHO05D006803 2.8e-44 182.2 133 71.4
THA.LOC104812511 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 2.8e-44 182.2 140 67.1
Aqoxy7G02293 Aquilegia oxysepala HOM05D005464 ORTHO05D006803 4.8e-44 181.4 142 66.9
EL10Ac9g21898 Beta vulgaris HOM05D005464 ORTHO05D006803 8.3e-44 180.6 122 73.0
Lalb_Chr14g0373811 Lupinus albus HOM05D005464 ORTHO05D006803 1.1e-43 180.3 147 63.3
CsaV3_4G001710 Cucumis sativus L. HOM05D005464 ORTHO05D006803 2.4e-43 179.1 128 72.7
MELO3C017863.2 Cucumis melo HOM05D005464 ORTHO05D006803 3.1e-43 178.7 128 72.7
Dinv30606 Davidia involucrata HOM05D005464 ORTHO05D006803 4.1e-43 178.3 131 75.6
PSO017G6540 Papaver somniferum HOM05D005464 ORTHO05D006803 5.4e-43 177.9 149 63.1
COL.COLO4_11947 Corchorus olitorius HOM05D005464 ORTHO05D006803 7.0e-43 177.6 128 70.3
AUR62016335 Chenopodium quinoa HOM05D005464 ORTHO05D006803 9.1e-43 177.2 127 69.3
Gohir.A05G123300 Gossypium hirsutum HOM05D005464 ORTHO05D006803 2.7e-42 175.6 130 68.5
Thecc.06G025100 Theobroma cacao HOM05D000467 ORTHO05D000379 3.5e-42 175.3 126 69.0
MBI14_g16402_MAGBIO Magnolia biondii HOM05D005464 ORTHO05D006803 4.5e-42 174.9 138 66.7
Sp1g13650 Schrenkiella parvula HOM05D005464 ORTHO05D006803 4.5e-42 174.9 132 65.9
unitig_0.g1114 Utricularia gibba HOM05D005464 ORTHO05D006803 4.5e-42 174.9 143 65.0
Gorai.009G128200 Gossypium raimondii HOM05D005464 ORTHO05D006803 1.7e-41 172.9 130 67.7
AL1G27420 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 2.9e-41 172.2 141 61.0
Lalb_Chr22g0350841 Lupinus albus HOM05D005464 ORTHO05D006803 1.9e-40 169.5 139 61.9
AT1G15330 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 3.3e-40 168.7 129 65.9
Carub.0001s1508 Capsella rubella HOM05D005464 ORTHO05D006803 4.2e-40 168.3 129 65.9
Zm00001eb232620 Zea mays HOM05D005464 ORTHO05D006803 5.5e-40 167.9 125 68.8
PSO170G0224 Papaver somniferum HOM05D005464 ORTHO05D006803 7.2e-40 167.5 151 59.6
BcaC05g25470 Brassica carinata HOM05D005464 ORTHO05D006803 1.6e-39 166.4 139 62.6
Eucgr.F03878 Eucalyptus grandis HOM05D005464 ORTHO05D006803 2.8e-39 165.6 144 61.1
A06p11340 Brassica napus HOM05D005464 ORTHO05D006803 6.1e-39 164.5 136 62.5
BraA06t24313Z Brassica rapa HOM05D005464 ORTHO05D006803 6.1e-39 164.5 136 62.5
Os02g0158900 Oryza sativa ssp. japonica HOM05D005464 ORTHO05D006803 6.1e-39 164.5 134 64.9
PGR102G0885 Punica granatum HOM05D005464 ORTHO05D006803 6.1e-39 164.5 128 64.1
BolC5t30083H Brassica oleracea HOM05D005464 ORTHO05D006803 1.4e-38 163.3 146 59.6
CARHR015860 Cardamine hirsuta HOM05D005464 ORTHO05D006803 1.4e-38 163.3 129 63.6
THA.LOC104812509 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 1.4e-38 163.3 127 67.7
Thhalv10008048m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 1.8e-38 162.9 129 62.0
Peaxi162Scf00207g00638 Petunia axillaris HOM05D005464 ORTHO05D006803 3.0e-38 162.2 117 70.1
Aa31LG7G100 Aethionema arabicum HOM05D005464 ORTHO05D006803 5.2e-38 161.4 143 58.7
AT1G80090 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 6.8e-38 161.0 126 65.9
C05p13460 Brassica napus HOM05D005464 ORTHO05D006803 6.8e-38 161.0 146 58.9
HPP92_016981 Vanilla planifolia HOM05D005464 ORTHO05D006803 4.4e-37 158.3 130 63.8
Gohir.D05G124200 Gossypium hirsutum HOM05D005464 ORTHO05D006803 9.8e-37 157.1 130 63.8
AUR62011516 Chenopodium quinoa HOM05D005464 ORTHO05D006803 2.2e-36 156.0 99 73.7
ATR0800G035 Amborella trichopoda HOM05D005464 ORTHO05D006803 1.8e-35 152.9 121 64.5
SHI11227 Sapria himalayana HOM05D005464 ORTHO05D006803 1.8e-35 152.9 121 64.5
AL2G41450 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 4.5e-34 148.3 134 59.7
arahy.Tifrunner.gnm1.ann1.JVJR89 Arachis hypogaea HOM05D005464 ORTHO05D006803 7.8e-34 147.5 122 65.6
arahy.Tifrunner.gnm1.ann1.Y6ZEHB Arachis hypogaea HOM05D005464 ORTHO05D006803 7.8e-34 147.5 122 65.6
Thhalv10019455m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 1.3e-33 146.7 126 62.7
BcaC08g47570 Brassica carinata HOM05D005464 ORTHO05D006803 5.0e-33 144.8 146 58.2
C06p54250 Brassica napus HOM05D005464 ORTHO05D006803 5.0e-33 144.8 146 58.2
BolC6t40438H Brassica oleracea HOM05D005464 ORTHO05D006803 5.0e-33 144.8 146 58.2
BcaB02g08721 Brassica carinata HOM05D005464 ORTHO05D006803 6.6e-33 144.4 139 56.8
A07p45420 Brassica napus HOM05D005464 ORTHO05D006803 8.6e-33 144.1 146 56.2
BraA07t32046Z Brassica rapa HOM05D005464 ORTHO05D006803 8.6e-33 144.1 146 56.2
AagrBONN_evm.TU.Sc2ySwM_344.2189 Anthoceros agrestis HOM05D005464 ORTHO05D006803 2.1e-31 139.4 129 51.9
SMO201G0050 Selaginella moellendorffii HOM05D005464 ORTHO05D006803 6.1e-31 137.9 125 55.2
Mapoly0007s0086 Marchantia polymorpha HOM05D005464 ORTHO05D006803 2.3e-30 136.0 113 55.8
Psat1g035880 Pisum sativum HOM05D005464 ORTHO05D006803 4.0e-30 135.2 102 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1642 Anthoceros agrestis HOM05D005464 ORTHO05D006803 4.4e-29 131.7 116 50.0
CARHR074410 Cardamine hirsuta HOM05D005464 ORTHO05D006803 4.9e-28 128.3 92 67.4
Sp5g35710 Schrenkiella parvula HOM05D005464 ORTHO05D006803 4.9e-28 128.3 92 67.4
Pp3c3_23830 Physcomitrium patens HOM05D005464 ORTHO05D006803 1.4e-27 126.7 112 54.5
QL05p029759 Quercus lobata HOM05D005464 ORTHO05D006803 4.7e-23 111.7 131 52.7
QL05p030118 Quercus lobata HOM05D005464 ORTHO05D006803 4.7e-23 111.7 131 52.7
Hma1.2p1_1144F.1_g261310 Hydrangea macrophylla HOM05D005464 ORTHO05D006803 9.8e-21 104.0 85 64.7
Duzib160G0683 Durio zibethinus HOM05D005464 ORTHO05D006803 2.4e-19 99.4 77 63.6
Carub.0002s2743 Capsella rubella HOM05D005464 ORTHO05D006803 7.8e-18 94.4 70 65.7
PGR102G1999 Punica granatum HOM05D005464 ORTHO05D006803 7.3e-16 87.8 70 61.4
CBR_g24374 Chara braunii HOM05D005464 ORTHO05D006803 1.6e-15 86.7 125 35.2
Aa31LG4G370 Aethionema arabicum HOM05D005464 ORTHO05D006803 3.1e-14 82.4 68 54.4
Psat6g211360 Pisum sativum HOM05D005464 ORTHO05D006803 8.6e-09 64.3 95 45.3
Hma1.2p1_0090F.1_g046010 Hydrangea macrophylla HOM05D005464 ORTHO05D048341 4.0e-06 55.5 29 79.3
Hma1.2p1_0090F.1_g046015 Hydrangea macrophylla HOM05D005464 ORTHO05D048341 4.0e-06 55.5 29 79.3


User provided reference genes

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