Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 3.4e-85 318.2 146 100.0
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 4.5e-53 211.5 174 62.1
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 4.5e-53 211.5 170 62.4
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 7.6e-53 210.7 162 64.2
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 3.8e-52 208.4 174 58.0
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 6.4e-52 207.6 174 58.6
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.4e-51 206.5 170 59.4
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.9e-51 206.1 170 61.2
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 2.1e-50 202.6 171 61.4
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.5e-50 201.8 174 58.6
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.5e-50 201.8 174 58.6
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 7.9e-50 200.7 168 59.5
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 7.9e-50 200.7 169 59.2
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-49 199.9 168 59.5
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 3.0e-49 198.7 169 60.4
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 3.9e-49 198.4 176 57.4
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 3.9e-49 198.4 174 58.6
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.1e-48 196.8 170 59.4
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 1.1e-48 196.8 174 56.3
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 2.5e-48 195.7 169 58.6
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 4.3e-48 194.9 171 57.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 4.3e-48 194.9 170 57.6
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 9.6e-48 193.7 170 57.6
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.3e-47 193.4 171 56.1
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.3e-47 193.4 170 58.2
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 1.3e-47 193.4 170 55.9
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.1e-47 192.6 169 56.8
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.1e-47 192.6 171 56.7
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 6.2e-47 191.0 174 58.0
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 8.2e-47 190.7 164 57.9
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.4e-46 189.9 170 56.5
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 1.8e-46 189.5 171 55.0
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.4e-46 189.1 169 56.8
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.0e-46 187.2 174 55.2
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.5e-45 186.4 174 54.6
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 1.5e-45 186.4 171 56.1
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 2.6e-45 185.7 170 55.3
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 3.4e-45 185.3 174 55.7
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 7.6e-45 184.1 170 53.5
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 7.6e-45 184.1 174 54.0
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.0e-44 183.7 174 54.6
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 1.3e-44 183.3 171 54.4
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 2.2e-44 182.6 169 56.8
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 6.5e-44 181.0 171 54.4
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.5e-44 181.0 171 54.4
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.9e-43 179.5 170 54.7
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 2.5e-43 179.1 171 53.8
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 4.2e-43 178.3 169 55.0
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 7.1e-43 177.6 175 53.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.2e-42 176.8 174 52.9
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.2e-42 176.8 174 52.9
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 1.6e-42 176.4 172 54.7
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 2.1e-42 176.0 169 54.4
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 2.7e-42 175.6 170 55.3
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 4.6e-42 174.9 170 53.5
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 1.3e-41 173.3 168 55.4
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 1.3e-41 173.3 171 52.0
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 1.8e-41 172.9 170 54.1
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 2.3e-41 172.6 168 54.2
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 3.9e-41 171.8 165 53.3
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 6.7e-41 171.0 171 53.8
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 1.5e-40 169.9 165 53.9
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 1.5e-40 169.9 168 53.6
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.9e-40 169.5 168 53.6
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 2.5e-40 169.1 165 53.3
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 3.3e-40 168.7 170 51.2
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 3.3e-40 168.7 169 54.4
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 3.3e-40 168.7 170 50.6
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 4.3e-40 168.3 170 50.6
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.6e-39 166.4 175 49.1
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 6.3e-39 164.5 167 50.3
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.4e-38 163.3 175 49.1
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.4e-38 163.3 167 52.7
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 3.1e-38 162.2 174 48.3
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 4.1e-38 161.8 170 49.4
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.0e-37 159.5 167 49.1
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.4e-37 158.7 167 49.1
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 7.7e-37 157.5 171 48.5
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 1.3e-36 156.8 170 52.4
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.7e-36 156.4 172 49.4
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 2.2e-36 156.0 164 48.8
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 5.0e-36 154.8 165 50.9
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 8.5e-36 154.1 170 50.0
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 1.9e-35 152.9 165 49.1
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 3.2e-35 152.1 165 47.9
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 9.4e-35 150.6 114 63.2
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 1.2e-34 150.2 163 47.2
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 1.6e-34 149.8 168 45.8
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.6e-34 148.7 114 62.3
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 3.6e-34 148.7 176 48.9
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 4.6e-34 148.3 165 46.7
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 7.9e-34 147.5 168 45.2
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 3.9e-33 145.2 145 51.7
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 6.7e-33 144.4 138 55.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 6.7e-33 144.4 174 48.3
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.1e-32 143.7 165 47.3
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.9e-32 142.9 147 50.3
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 7.4e-32 141.0 166 44.0
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 7.4e-32 141.0 170 47.1
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 9.7e-32 140.6 166 43.4
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.7e-31 139.8 179 46.9
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 2.0e-29 132.9 151 47.7
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 7.7e-29 131.0 121 53.7
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 3.8e-28 128.6 92 67.4
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.9e-27 126.3 171 43.3
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.6e-26 123.2 164 43.9
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 2.7e-26 122.5 144 43.8
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 4.7e-26 121.7 169 39.6
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.0e-25 120.6 151 47.0
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.0e-25 120.6 90 66.7
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 2.3e-25 119.4 144 43.1
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 2.2e-23 112.8 171 38.0
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 1.7e-20 103.2 148 43.2
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 1.9e-19 99.8 130 43.8
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 7.2e-19 97.8 154 39.6
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 8.0e-18 94.4 110 48.2
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 1.1e-11 73.9 138 34.8
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 1.2e-08 63.9 41 68.3


User provided reference genes

Program Settings