Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011793 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.3e-70 269.6 138 100.0
CSS0023618 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.1e-61 240.0 147 86.4
CSS0045601 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 7.9e-60 233.8 163 77.9
Rhsim13G0088500 Rhododendron simsii HOM05D005589 ORTHO05D006948 2.1e-52 209.1 163 68.7
TWI31G1338 Tripterygium wilfordii HOM05D005589 ORTHO05D006948 3.0e-51 205.3 163 65.6
vmacro03127 Vaccinium macrocarpon HOM05D005589 ORTHO05D006948 3.0e-51 205.3 164 67.7
Cc01_g12110 Coffea canephora HOM05D005589 ORTHO05D006948 8.8e-51 203.8 162 66.0
Hma1.2p1_0846F.1_g227810 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 1.5e-50 203.0 163 66.3
Dinv26284 Davidia involucrata HOM05D005589 ORTHO05D006948 2.0e-50 202.6 163 68.1
Actinidia37259 Actinidia chinensis HOM05D005589 ORTHO05D006948 4.4e-50 201.4 163 66.9
MD03G1103200 Malus domestica HOM05D005589 ORTHO05D006948 5.7e-50 201.1 163 65.0
Ciclev10027829m.g Citrus clementina HOM05D005589 ORTHO05D006948 7.4e-50 200.7 163 64.4
ECA247G1976 Erigeron canadensis HOM05D005589 ORTHO05D006948 9.7e-50 200.3 163 62.0
GSVIVG01025056001 Vitis vinifera HOM05D005589 ORTHO05D006948 9.7e-50 200.3 163 64.4
Lj1A176T55 Lonicera japonica HOM05D005589 ORTHO05D006948 2.2e-49 199.1 163 65.0
CANSAT54G1803 Cannabis sativa HOM05D005589 ORTHO05D006948 2.8e-49 198.7 163 63.2
MD11G1116800 Malus domestica HOM05D005589 ORTHO05D006948 3.7e-49 198.4 163 63.8
Manes.04G029200 Manihot esculenta HOM05D005589 ORTHO05D006948 4.8e-49 198.0 163 63.2
Atru.chr3.3796 Acer truncatum HOM05D005589 ORTHO05D006948 1.8e-48 196.1 163 62.6
HanXRQChr08g0228221 Helianthus annuus HOM05D005589 ORTHO05D006948 2.4e-48 195.7 163 61.3
Prupe.6G087200 Prunus persica HOM05D005589 ORTHO05D006948 2.4e-48 195.7 163 63.8
Actinidia07078 Actinidia chinensis HOM05D005589 ORTHO05D006948 3.1e-48 195.3 151 70.2
Cfa011427 Carpinus fangiana HOM05D005589 ORTHO05D006948 4.1e-48 194.9 163 61.3
Haze_24005 Corylus avellana HOM05D005589 ORTHO05D006948 4.1e-48 194.9 163 62.0
Oeu040274.2 Olea europaea HOM05D005589 ORTHO05D006948 4.1e-48 194.9 163 64.4
Lsat_1_v5_gn_9_21601 Lactuca sativa HOM05D005589 ORTHO05D006948 5.3e-48 194.5 163 60.7
DCAR_015589 Daucus carota HOM05D005589 ORTHO05D006948 7.0e-48 194.1 163 62.6
Ah.08g215000 Amaranthus hybridus HOM05D005589 ORTHO05D006948 1.2e-47 193.4 163 62.6
Migut.D02148 Erythranthe guttata HOM05D005589 ORTHO05D006948 2.0e-47 192.6 163 65.0
Potri.001G234300 Populus trichocarpa HOM05D005589 ORTHO05D006948 5.9e-47 191.0 163 62.0
EL10Ac7g15939 Beta vulgaris HOM05D005589 ORTHO05D006948 1.0e-46 190.3 163 62.0
CiPaw.13G101800 Carya illinoinensis HOM05D005589 ORTHO05D006948 1.0e-46 190.3 163 60.1
Duzib168G1570 Durio zibethinus HOM05D005589 ORTHO05D006948 1.0e-46 190.3 163 60.1
Sabra16G0140600 Salix brachista HOM05D005589 ORTHO05D006948 1.0e-46 190.3 163 61.3
Gohir.A05G098800 Gossypium hirsutum HOM05D005589 ORTHO05D006948 1.7e-46 189.5 163 60.1
Gohir.D05G098801 Gossypium hirsutum HOM05D005589 ORTHO05D006948 1.7e-46 189.5 163 60.1
AUR62009648 Chenopodium quinoa HOM05D005589 ORTHO05D006948 2.2e-46 189.1 163 60.7
AUR62001854 Chenopodium quinoa HOM05D005589 ORTHO05D006948 2.9e-46 188.7 163 60.7
Gorai.009G102500 Gossypium raimondii HOM05D005589 ORTHO05D006948 5.0e-46 188.0 163 59.5
FvH4_3g34630 Fragaria vesca HOM05D005589 ORTHO05D006948 8.5e-46 187.2 163 60.1
FAN11G1618 Fragaria x ananassa HOM05D005589 ORTHO05D006948 8.5e-46 187.2 163 60.1
FAN16G1588 Fragaria x ananassa HOM05D005589 ORTHO05D006948 8.5e-46 187.2 163 60.1
TAR623G1588 Trochodendron aralioides HOM05D005589 ORTHO05D006948 8.5e-46 187.2 162 62.3
RcHm_v2.0_Chr5g0062341 Rosa chinensis HOM05D005589 ORTHO05D006948 1.1e-45 186.8 163 60.7
Peaxi162Scf00411g00711 Petunia axillaris HOM05D005589 ORTHO05D006948 1.9e-45 186.0 163 61.3
Ca_19212_v3 Cicer arietinum L. HOM05D005589 ORTHO05D006948 2.5e-45 185.7 163 60.7
FAN25G3171 Fragaria x ananassa HOM05D005589 ORTHO05D006948 4.2e-45 184.9 163 59.5
Thecc.09G329900 Theobroma cacao HOM05D005589 ORTHO05D006948 4.2e-45 184.9 163 57.7
CAN.G755.19 Capsicum annuum HOM05D005589 ORTHO05D006948 5.5e-45 184.5 163 60.7
Lj3g0027543 Lotus japonicus HOM05D005589 ORTHO05D006948 5.5e-45 184.5 163 60.1
Solyc11g072950.3 Solanum lycopersicum HOM05D005589 ORTHO05D006948 7.2e-45 184.1 163 60.1
Sopen11g030610 Solanum pennellii HOM05D005589 ORTHO05D006948 7.2e-45 184.1 163 60.1
MBI05_g07866_MAGBIO Magnolia biondii HOM05D005589 ORTHO05D006948 9.4e-45 183.7 163 60.1
Nitab4.5_0002684g0170 Nicotiana tabacum HOM05D005589 ORTHO05D006948 1.2e-44 183.3 163 60.1
Nitab4.5_0007030g0040 Nicotiana tabacum HOM05D005589 ORTHO05D006948 1.2e-44 183.3 163 60.1
Phvul.011G069300 Phaseolus vulgaris HOM05D005589 ORTHO05D006948 1.2e-44 183.3 163 58.9
Lalb_Chr19g0137591 Lupinus albus HOM05D005589 ORTHO05D006948 1.6e-44 183.0 163 58.9
FAN21G0436 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.1e-44 182.6 163 58.9
PGSC0003DMG400015549 Solanum tuberosum HOM05D005589 ORTHO05D006948 2.1e-44 182.6 163 59.5
Aqoxy2G01955 Aquilegia oxysepala HOM05D005589 ORTHO05D006948 3.6e-44 181.8 163 58.9
Psat7g220760 Pisum sativum HOM05D005589 ORTHO05D006948 3.6e-44 181.8 163 59.5
Hund05020 Selenicereus undatus HOM05D005589 ORTHO05D006948 3.6e-44 181.8 163 59.5
VMungo1127G2244 Vigna mungo HOM05D005589 ORTHO05D006948 6.1e-44 181.0 163 58.9
SGA_v2.0_scaffold394G50722 Striga asiatica HOM05D005589 ORTHO05D006948 1.4e-43 179.9 163 61.3
MSTRG.21170 Avicennia marina HOM05D005589 ORTHO05D006948 2.3e-43 179.1 163 61.3
Glyma.11G145645 Glycine max HOM05D005589 ORTHO05D006948 3.0e-43 178.7 163 57.7
arahy.Tifrunner.gnm1.ann1.3ELA68 Arachis hypogaea HOM05D005589 ORTHO05D006948 6.8e-43 177.6 163 58.3
Carub.0005s1206 Capsella rubella HOM05D005589 ORTHO05D006948 1.2e-42 176.8 163 55.8
PGR119G2409 Punica granatum HOM05D005589 ORTHO05D006948 1.2e-42 176.8 163 57.1
Sc21g0005390 Simmondsia chinensis HOM05D005589 ORTHO05D006948 1.2e-42 176.8 162 56.2
Glyma.12G074800 Glycine max HOM05D005589 ORTHO05D006948 1.5e-42 176.4 163 55.8
ClCG03G001750 Citrullus lanatus HOM05D005589 ORTHO05D006948 3.4e-42 175.3 163 55.8
CsaV3_1G033840 Cucumis sativus L. HOM05D005589 ORTHO05D006948 3.4e-42 175.3 163 55.2
Eucgr.J02099 Eucalyptus grandis HOM05D005589 ORTHO05D006948 4.4e-42 174.9 163 57.1
MELO3C020678.2 Cucumis melo HOM05D005589 ORTHO05D006948 7.5e-42 174.1 163 54.6
PSO339G3114 Papaver somniferum HOM05D005589 ORTHO05D006948 7.5e-42 174.1 163 58.9
AT3G46220 Arabidopsis thaliana HOM05D005589 ORTHO05D006948 3.7e-41 171.8 162 54.9
PSO384G0870 Papaver somniferum HOM05D005589 ORTHO05D006948 3.7e-41 171.8 163 58.3
AL5G25010 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 4.8e-41 171.4 163 54.0
Sed0009383 Sechium edule HOM05D005589 ORTHO05D006948 4.8e-41 171.4 163 55.2
Sp5g15410 Schrenkiella parvula HOM05D005589 ORTHO05D006948 8.3e-41 170.6 163 54.6
THA.LOC104799457 Tarenaya hassleriana HOM05D005589 ORTHO05D006948 8.3e-41 170.6 163 53.4
Thhalv10002404m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 1.1e-40 170.2 163 54.0
A06p20980 Brassica napus HOM05D005589 ORTHO05D006948 2.4e-40 169.1 163 54.0
CARHR154660 Cardamine hirsuta HOM05D005589 ORTHO05D006948 3.1e-40 168.7 163 54.0
C03p70540 Brassica napus HOM05D005589 ORTHO05D006948 7.0e-40 167.5 163 54.0
Aa31LG4G15320 Aethionema arabicum HOM05D005589 ORTHO05D006948 1.2e-39 166.8 163 51.5
COL.COLO4_18425 Corchorus olitorius HOM05D005589 ORTHO05D006948 1.6e-39 166.4 144 61.8
arahy.Tifrunner.gnm1.ann1.0DF5JX Arachis hypogaea HOM05D005589 ORTHO05D006948 3.5e-39 165.2 166 56.0
TPR.G2986 Trifolium pratense HOM05D005589 ORTHO05D006948 5.9e-39 164.5 168 54.8
AL1G56500 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 5.5e-37 157.9 162 52.5
BraA06t25186Z Brassica rapa HOM05D005589 ORTHO05D006948 5.5e-37 157.9 177 49.2
Medtr4g062090 Medicago truncatula HOM05D005589 ORTHO05D006948 1.6e-36 156.4 161 54.7
BolC3t19334H Brassica oleracea HOM05D005589 ORTHO05D006948 2.7e-36 155.6 177 49.2
unitig_37.g12679 Utricularia gibba HOM05D005589 ORTHO05D006948 3.6e-36 155.2 146 60.3
ATR0759G074 Amborella trichopoda HOM05D005589 ORTHO05D006948 6.8e-35 151.0 161 51.6
Os05g0117600 Oryza sativa ssp. japonica HOM05D005589 ORTHO05D006948 1.2e-34 150.2 163 47.9
Zm00001eb266020 Zea mays HOM05D005589 ORTHO05D006948 8.3e-33 144.1 163 46.6
BcaC01g01924 Brassica carinata HOM05D005589 ORTHO05D006948 3.0e-27 125.6 90 67.8
SalBow3G3271 Salvia bowleyana HOM05D005589 ORTHO05D006948 2.2e-25 119.4 113 55.8
HPP92_025619 Vanilla planifolia HOM05D005589 ORTHO05D006948 9.2e-24 114.0 210 35.7
SEGI_37108 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 5.6e-21 104.8 111 48.6
AagrBONN_evm.TU.Sc2ySwM_228.2492 Anthoceros agrestis HOM05D005589 ORTHO05D006948 7.3e-21 104.4 159 37.1
SMO196G0111 Selaginella moellendorffii HOM05D005589 ORTHO05D006948 9.5e-21 104.0 162 37.0
Pp3c8_20630 Physcomitrium patens HOM05D005589 ORTHO05D006948 1.2e-18 97.1 158 36.7
Thhalv10002414m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 9.8e-18 94.0 117 46.2
Mapoly0007s0143 Marchantia polymorpha HOM05D005589 ORTHO05D006948 1.9e-16 89.7 92 47.8
CBR_g777 Chara braunii HOM05D005589 ORTHO05D006948 1.9e-13 79.7 162 29.0
arahy.Tifrunner.gnm1.ann1.HF8MSC Arachis hypogaea HOM05D005589 ORTHO05D006948 2.1e-12 76.3 131 38.2
CBR_g29437 Chara braunii HOM05D005589 ORTHO05D006948 2.3e-11 72.8 155 26.5
Gohir.D08G115100 Gossypium hirsutum HOM05D005589 ORTHO05D047064 2.3e-11 72.8 41 80.5
Gorai.004G124000 Gossypium raimondii HOM05D005589 ORTHO05D047064 2.3e-11 72.8 41 80.5
arahy.Tifrunner.gnm1.ann1.KKDX05 Arachis hypogaea HOM05D001394 ORTHO05D001237 1.2e-10 70.5 86 43.0
arahy.Tifrunner.gnm1.ann1.NIGF9J Arachis hypogaea HOM05D001394 ORTHO05D001237 3.4e-10 68.9 39 76.9
CDE02G1253 Ceratophyllum demersum HOM05D005589 ORTHO05D006948 4.4e-10 68.6 39 71.8
Cpa.g.sc252.12 Carica papaya HOM05D005589 ORTHO05D006948 7.5e-10 67.8 50 72.0
SalBow3G0177 Salvia bowleyana HOM05D005589 ORTHO05D006948 6.0e-07 58.2 50 66.0


User provided reference genes

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