Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.2e-58 229.6 111 100.0
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 4.3e-48 194.5 111 84.7
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 9.6e-48 193.4 111 82.9
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 6.9e-46 187.2 112 77.7
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 6.9e-46 187.2 112 77.7
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 7.6e-45 183.7 112 77.7
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.9e-43 179.1 111 75.7
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.4e-43 178.7 112 75.9
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.6e-42 176.0 108 74.1
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.6e-42 176.0 101 79.2
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 4.6e-42 174.5 111 73.9
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 6.0e-42 174.1 110 71.8
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 6.0e-42 174.1 110 72.7
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 7.8e-42 173.7 112 71.4
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 7.8e-42 173.7 96 82.3
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 1.0e-41 173.3 112 71.4
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.0e-41 173.3 110 72.7
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 1.3e-41 172.9 111 76.6
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.3e-41 172.9 116 72.4
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.3e-41 172.9 112 67.0
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 2.3e-41 172.2 104 75.0
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 3.0e-41 171.8 113 70.8
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 3.9e-41 171.4 101 78.2
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 3.9e-41 171.4 101 74.3
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 6.6e-41 170.6 101 73.3
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 8.7e-41 170.2 103 74.8
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 8.7e-41 170.2 104 75.0
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 1.5e-40 169.5 112 65.2
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 1.5e-40 169.5 110 70.0
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.5e-40 169.5 110 70.0
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.5e-40 169.5 108 70.4
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.9e-40 169.1 111 69.4
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.9e-40 169.1 117 68.4
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 3.3e-40 168.3 120 63.3
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 4.3e-40 167.9 105 72.4
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.6e-40 167.5 110 69.1
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 5.6e-40 167.5 113 69.9
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 7.3e-40 167.2 108 71.3
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 7.3e-40 167.2 106 72.6
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 2.8e-39 165.2 106 68.9
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 3.6e-39 164.9 111 69.4
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 6.2e-39 164.1 101 69.3
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 6.2e-39 164.1 108 69.4
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.1e-38 163.3 111 70.3
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.4e-38 162.9 110 67.3
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.4e-38 162.9 98 74.5
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.4e-38 162.9 98 74.5
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.4e-38 162.9 98 74.5
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 1.8e-38 162.5 113 67.3
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 2.4e-38 162.2 110 66.4
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 6.9e-38 160.6 108 66.7
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 1.2e-37 159.8 101 71.3
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 1.2e-37 159.8 110 67.3
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.5e-37 159.5 101 71.3
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 2.6e-37 158.7 101 67.3
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 2.6e-37 158.7 105 70.5
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 3.4e-37 158.3 101 71.3
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 4.5e-37 157.9 101 70.3
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 4.5e-37 157.9 101 70.3
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 4.5e-37 157.9 111 66.7
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 5.8e-37 157.5 103 68.9
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 5.8e-37 157.5 110 62.7
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 7.6e-37 157.1 113 66.4
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 7.6e-37 157.1 110 66.4
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 1.3e-36 156.4 106 67.9
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.7e-36 156.0 109 66.1
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 2.2e-36 155.6 101 69.3
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 4.9e-36 154.5 108 63.0
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 6.4e-36 154.1 101 68.3
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 8.4e-36 153.7 106 67.0
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 1.1e-35 153.3 118 61.9
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.4e-35 152.9 106 66.0
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 1.9e-35 152.5 106 65.1
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 2.4e-35 152.1 111 64.0
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 3.2e-35 151.8 94 73.4
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 3.2e-35 151.8 113 65.5
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 5.4e-35 151.0 110 60.9
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 7.1e-35 150.6 145 53.8
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.2e-34 149.8 91 73.6
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 1.6e-34 149.4 87 81.6
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 2.1e-34 149.1 103 66.0
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 4.6e-34 147.9 109 62.4
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 7.9e-34 147.1 110 60.9
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 1.0e-33 146.7 104 62.5
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.3e-33 145.6 104 64.4
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 3.0e-33 145.2 101 62.4
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.9e-33 144.8 100 62.0
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 3.9e-33 144.8 105 59.0
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 6.7e-33 144.1 102 63.7
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.1e-32 143.3 97 67.0
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.9e-32 142.5 104 63.5
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 7.4e-32 140.6 102 62.7
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 9.6e-32 140.2 102 62.7
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 1.3e-31 139.8 86 76.7
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 2.1e-31 139.0 104 59.6
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 2.1e-31 139.0 107 62.6
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 6.2e-31 137.5 102 61.8
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 6.2e-31 137.5 102 61.8
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 2.4e-30 135.6 102 61.8
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 1.5e-29 132.9 87 73.6
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 7.1e-27 124.0 80 70.0
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 4.6e-26 121.3 68 76.5
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.3e-25 119.8 82 68.3
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.9e-24 115.9 68 76.5
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 2.5e-24 115.5 72 75.0
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 5.6e-24 114.4 74 71.6
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 2.8e-23 112.1 79 68.4
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 3.7e-23 111.7 99 52.5
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 1.5e-21 106.3 113 45.1
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.3e-20 103.2 125 42.4
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 3.2e-19 98.6 85 55.3
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 6.0e-18 94.4 89 47.2
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.8e-17 92.8 101 53.5
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 8.7e-17 90.5 98 43.9
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.5e-16 89.7 61 70.5
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.4e-14 83.2 59 57.6
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 1.4e-11 73.2 155 28.4
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 5.5e-11 71.2 44 70.5


User provided reference genes

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