Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011786 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 1.4e-80 302.8 142 100.0
CSS0036907 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 9.6e-69 263.5 150 86.0
CSS0017557 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 6.2e-68 260.8 151 84.8
CSS0039064 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 2.0e-66 255.8 151 83.4
CSS0043225 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 2.6e-66 255.4 151 83.4
CSS0000279 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 4.5e-66 254.6 151 83.4
CSS0031054 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 3.8e-65 251.5 151 81.5
CSS0019218 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 3.5e-63 245.0 151 80.8
CSS0020351 Camellia sinensis var. sinensis HOM05D015332 ORTHO05D000037 1.8e-51 206.1 145 70.3
CSS0000244 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.9e-24 116.3 209 36.8
CSS0025276 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 9.8e-21 104.0 177 37.9
CSS0014704 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-14 84.0 199 30.2
CSS0015075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.0e-14 82.0 199 30.2
CSS0024057 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.0e-14 82.0 199 30.2
CSS0005680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.8e-14 81.3 199 30.2
Rhsim10G0164000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.4e-11 73.6 203 29.6
Rhsim08G0142700 Rhododendron simsii HOM05D000034 ORTHO05D000037 9.2e-11 70.9 169 33.1
TWI09G0723 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.6e-10 70.1 178 30.9
CSS0019129 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.5e-10 68.9 173 32.4
CSS0030267 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-09 67.4 75 48.0
Rhsim02G0038000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.0e-09 67.4 205 28.3
Rhsim09G0055100 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.7e-09 66.6 169 32.0
Rhsim09G0200000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.7e-09 66.6 205 29.3
Rhsim08G0093200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.9e-09 65.9 205 28.3
CSS0047854 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.0e-09 65.1 73 43.8
CSS0050094 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.0e-09 65.1 188 28.7
RhsimUnG0152200 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.6e-09 64.7 205 29.3
TWI36G0210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.6e-09 64.7 136 33.1
CSS0003904 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-09 64.3 73 43.8
Rhsim01G0123300 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.6e-09 64.3 104 38.5
TWI74G1293 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-08 63.9 73 46.6
Rhsim01G0089000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-08 63.5 206 29.6
Rhsim03G0048400 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-08 63.5 206 29.6
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.5e-08 63.5 197 26.4
arahy.Tifrunner.gnm1.ann1.WA83K8 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.9e-08 63.2 130 33.8
AUR62039525 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.9e-08 63.2 163 30.1
Rhsim04G0145300 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.5e-08 62.8 205 28.8
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.3e-08 62.4 73 42.5
TWI39G0489 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.3e-08 62.4 73 42.5
TWI34G0695 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.3e-08 62.0 110 36.4
Rhsim13G0157600 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.6e-08 61.6 205 27.3
arahy.Tifrunner.gnm1.ann1.6D5SIE Arachis hypogaea HOM05D000034 ORTHO05D000037 7.3e-08 61.2 56 50.0
CSS0013436 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.3e-08 61.2 73 42.5
CSS0020120 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.3e-08 61.2 73 45.2
TWI23G0349 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.3e-08 61.2 73 42.5
CSS0038692 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 9.5e-08 60.8 76 42.1
CANSAT01G2719 Cannabis sativa HOM05D000034 ORTHO05D000037 9.5e-08 60.8 142 31.7
Prupe.1G189200 Prunus persica HOM05D000034 ORTHO05D000037 9.5e-08 60.8 51 52.9
TWI12G0430 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.5e-08 60.8 73 43.8
EL10Ac7g16586 Beta vulgaris HOM05D000034 ORTHO05D000037 1.2e-07 60.5 184 27.7
CSS0002858 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.1e-07 59.7 188 28.7
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 2.1e-07 59.7 91 37.4
CSS0005131 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.8e-07 59.3 188 28.7
CSS0034168 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.8e-07 59.3 188 28.2
Rhsim02G0240900 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.8e-07 59.3 201 27.4
TWI38G1809 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.8e-07 59.3 65 44.6
arahy.Tifrunner.gnm1.ann1.JE1DTX Arachis hypogaea HOM05D000034 ORTHO05D000037 3.6e-07 58.9 130 32.3
TWI38G2340 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.7e-07 58.5 99 36.4
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 6.1e-07 58.2 192 27.1
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 6.1e-07 58.2 170 28.8
CSS0011045 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.1e-07 58.2 188 28.2
arahy.Tifrunner.gnm1.ann1.U05UVI Arachis hypogaea HOM05D000034 ORTHO05D000037 1.0e-06 57.4 172 26.7
CSS0038415 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-06 57.4 157 32.5
TWI23G0160 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.4 73 42.5
TWI34G1702 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.4 73 42.5
TWI38G0294 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.4 73 42.5
TWI53G0605 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.4 73 42.5
QL08p042355 Quercus lobata HOM05D000034 ORTHO05D000037 1.8e-06 56.6 140 30.0
RcHm_v2.0_Chr6g0292381 Rosa chinensis HOM05D000034 ORTHO05D000037 1.8e-06 56.6 202 27.2
arahy.Tifrunner.gnm1.ann1.D4V5SR Arachis hypogaea HOM05D000034 ORTHO05D000037 2.3e-06 56.2 136 30.9
CSS0015258 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.3e-06 56.2 188 27.7
AUR62009858 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-06 56.2 171 28.1
Gorai.005G210300 Gossypium raimondii HOM05D000034 ORTHO05D000037 2.3e-06 56.2 75 40.0
Gorai.010G169600 Gossypium raimondii HOM05D000034 ORTHO05D000037 2.3e-06 56.2 75 38.7
EL10Ac7g18212 Beta vulgaris HOM05D000034 ORTHO05D000037 3.0e-06 55.8 191 25.1
CSS0001482 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.0e-06 55.8 157 31.8
CSS0037004 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.0e-06 55.8 101 34.7
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 3.0e-06 55.8 156 26.3
arahy.Tifrunner.gnm1.ann1.0FUF30 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.0e-06 55.5 194 25.8
arahy.Tifrunner.gnm1.ann1.JL1WEN Arachis hypogaea HOM05D000034 ORTHO05D000037 4.0e-06 55.5 142 29.6
arahy.Tifrunner.gnm1.ann1.TEB0R7 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.0e-06 55.5 142 29.6
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 4.0e-06 55.5 142 29.6
CSS0027502 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.0e-06 55.5 153 32.7
CSS0036622 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.0e-06 55.5 153 32.7
Rhsim05G0142000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.0e-06 55.5 103 35.0
TWI14G0994 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.0e-06 55.5 127 30.7
Atru.chr11.924 Acer truncatum HOM05D000034 ORTHO05D000285 5.2e-06 55.1 116 31.0
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 5.2e-06 55.1 142 29.6
CSS0000225 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.2e-06 55.1 153 32.7
CANSAT80G1843 Cannabis sativa HOM05D000034 ORTHO05D000037 5.2e-06 55.1 118 33.9
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 6.8e-06 54.7 142 28.9
arahy.Tifrunner.gnm1.ann1.VI2TS7 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.8e-06 54.7 73 39.7
EL10Ac4g08281 Beta vulgaris HOM05D000034 ORTHO05D000037 6.8e-06 54.7 49 53.1
Hma1.2p1_0148F.1_g066085 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.8e-06 54.7 138 31.9
Psat5g170880 Pisum sativum HOM05D000034 ORTHO05D000037 6.8e-06 54.7 139 28.1
TWI23G0109 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.8e-06 54.7 193 27.5
arahy.Tifrunner.gnm1.ann1.H3BLYN Arachis hypogaea HOM05D000034 ORTHO05D000037 8.9e-06 54.3 194 25.8
arahy.Tifrunner.gnm1.ann1.VJTY5B Arachis hypogaea HOM05D000034 ORTHO05D000037 8.9e-06 54.3 194 25.8
CSS0014685 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.9e-06 54.3 73 38.4
HanXRQChr07g0199291 Helianthus annuus HOM05D000034 ORTHO05D000037 8.9e-06 54.3 191 25.1
TWI14G0766 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.9e-06 54.3 73 39.7
TWI38G0764 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.9e-06 54.3 73 41.1
TWI75G1289 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.9e-06 54.3 73 39.7
TWI79G1410 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.9e-06 54.3 105 34.3


User provided reference genes

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