Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011782 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 2.3e-265 918.3 451 100.0
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.9e-219 765.8 451 81.4
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 4.4e-200 701.4 451 74.7
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 1.3e-199 699.9 449 74.2
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 1.8e-198 696.0 449 74.6
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 3.1e-198 695.3 449 74.2
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 3.1e-198 695.3 449 74.6
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 3.1e-198 695.3 449 74.4
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 3.1e-198 695.3 449 74.4
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 4.5e-197 691.4 451 72.3
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 7.8e-197 690.6 449 72.8
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 1.3e-196 689.9 449 73.9
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 1.7e-196 689.5 449 73.7
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.9e-196 688.7 451 74.3
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 3.8e-196 688.3 449 73.3
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 5.0e-196 688.0 451 73.2
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 4.3e-195 684.9 449 72.6
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 6.1e-194 681.0 452 72.1
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 6.1e-194 681.0 450 73.1
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 8.0e-194 680.6 449 72.2
Duzib168G1434 Durio zibethinus HOM05D002816 ORTHO05D005633 1.5e-192 676.4 449 72.2
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 9.8e-192 673.7 452 71.2
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 1.1e-190 670.2 449 71.9
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 1.1e-190 670.2 449 71.9
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 4.1e-190 668.3 449 72.8
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 9.2e-190 667.2 450 70.7
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 2.0e-189 666.0 451 71.8
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 2.0e-189 666.0 453 71.3
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 2.7e-189 665.6 451 71.0
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 2.7e-189 665.6 449 71.5
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 4.6e-189 664.8 449 71.0
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 6.0e-189 664.5 449 71.0
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 2.3e-188 662.5 449 71.0
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 2.3e-188 662.5 449 70.4
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 2.3e-188 662.5 451 70.5
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 3.0e-188 662.1 449 70.8
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 6.6e-188 661.0 450 70.7
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 3.3e-187 658.7 451 70.5
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 7.3e-187 657.5 450 71.3
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 3.6e-186 655.2 450 69.8
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 3.6e-186 655.2 451 70.3
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 1.1e-185 653.7 451 69.8
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 1.4e-185 653.3 449 70.8
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 2.3e-185 652.5 449 69.7
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 4.0e-185 651.7 449 70.6
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 4.0e-185 651.7 449 70.6
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 5.2e-185 651.4 431 71.7
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 1.5e-184 649.8 449 70.2
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 2.6e-184 649.0 449 69.5
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 2.9e-183 645.6 451 68.5
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 3.7e-183 645.2 449 69.7
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 3.7e-183 645.2 453 68.2
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 3.7e-183 645.2 449 70.2
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 1.4e-182 643.3 449 69.5
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 7.0e-182 641.0 448 69.6
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 1.0e-180 637.1 449 68.8
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 3.0e-180 635.6 449 66.8
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 1.1e-179 633.6 449 68.2
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 1.5e-179 633.3 439 70.6
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 5.6e-179 631.3 449 66.4
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 9.5e-179 630.6 449 70.4
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 3.6e-178 628.6 449 66.8
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 3.1e-177 625.5 449 69.0
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 3.1e-177 625.5 452 71.5
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 8.9e-177 624.0 449 68.8
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 2.2e-175 619.4 449 67.7
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 2.9e-175 619.0 431 69.1
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 4.9e-175 618.2 454 66.1
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 7.1e-174 614.4 451 65.2
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 9.2e-174 614.0 455 66.2
MBI04_g27135_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 1.2e-173 613.6 423 70.9
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 2.1e-173 612.8 431 67.7
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 4.6e-173 611.7 456 66.4
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 4.6e-173 611.7 450 64.0
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 7.8e-173 610.9 449 67.3
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 7.8e-173 610.9 450 64.7
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 1.3e-172 610.1 453 64.5
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 2.5e-171 605.9 451 64.3
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 5.6e-171 604.7 434 65.2
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 7.3e-171 604.4 451 64.3
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 2.8e-170 602.4 458 64.8
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 5.8e-168 594.7 451 63.9
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 9.9e-168 594.0 452 63.1
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 9.9e-168 594.0 455 63.1
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 1.3e-167 593.6 457 62.8
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 4.9e-167 591.7 457 62.6
Lju1319A3T40 Lonicera japonica HOM05D002816 ORTHO05D005633 3.3e-163 578.9 424 66.7
Actinidia39381 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.2e-160 570.5 449 65.3
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 1.7e-151 540.0 450 58.2
SEGI_08878 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 3.9e-124 449.1 467 51.2
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 3.9e-124 449.1 467 51.2
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 5.1e-124 448.7 297 71.0
SEGI_13421 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.7e-117 425.6 468 50.0
Lj1A364T31 Lonicera japonica HOM05D002816 ORTHO05D005633 1.0e-116 424.5 282 70.6
Actinidia06323 Actinidia chinensis HOM05D002816 ORTHO05D005633 7.4e-107 391.7 344 57.0
Psat7g121000 Pisum sativum HOM05D002816 ORTHO05D005633 1.3e-106 391.0 366 54.4
PSO339G1112 Papaver somniferum HOM05D002816 ORTHO05D005633 7.7e-96 355.1 241 68.0
AagrBONN_evm.TU.Sc2ySwM_344.2597 Anthoceros agrestis HOM05D002816 ORTHO05D005633 2.6e-91 340.1 506 40.7
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 2.5e-86 323.6 481 40.3
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 3.3e-86 323.2 481 40.3
Glyma.12G054833 Glycine max HOM05D002816 ORTHO05D005633 1.8e-81 307.4 231 63.6
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 1.4e-76 291.2 226 63.3
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 5.2e-76 289.3 226 61.9
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 6.8e-76 288.9 236 59.7
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 3.7e-74 283.1 236 58.9
MBI04_g14276_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 8.3e-74 282.0 180 76.1
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 4.1e-73 279.6 251 58.2
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 1.3e-71 274.6 234 56.8
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 1.7e-71 274.2 232 60.8
MBI04_g14277_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 2.5e-70 270.4 179 69.8
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 1.2e-69 268.1 223 62.3
Mapoly0023s0010 Marchantia polymorpha HOM05D002816 ORTHO05D005633 3.1e-60 236.9 494 31.8
Psat7g120960 Pisum sativum HOM05D002816 ORTHO05D005633 7.8e-56 222.2 152 67.1
Ca_20583_v3 Cicer arietinum L. HOM05D002816 ORTHO05D005633 1.9e-54 217.6 163 65.0
Lj1C364T9 Lonicera japonica HOM05D002816 ORTHO05D005633 4.6e-48 196.4 127 78.0
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 2.3e-47 194.1 234 44.4
AagrBONN_evm.TU.Sc2ySwM_344.2583 Anthoceros agrestis HOM05D002816 ORTHO05D005633 2.1e-45 187.6 171 51.5
SEGI_37312 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 2.9e-34 150.6 188 42.0
Psat7g109160 Pisum sativum HOM05D002816 ORTHO05D005633 2.1e-24 117.9 78 74.4
Psat7g109040 Pisum sativum HOM05D002816 ORTHO05D005633 2.0e-19 101.3 87 59.8
Psat6g019120 Pisum sativum HOM05D002816 ORTHO05D005633 4.2e-17 93.6 81 50.6
CAN.G179.1 Capsicum annuum HOM05D002816 ORTHO05D005633 4.8e-13 80.1 62 67.7


User provided reference genes

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