Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.7e-67 259.2 135 100.0
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 5.7e-63 244.2 132 96.2
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 9.2e-61 236.9 132 94.7
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.5e-58 229.6 134 91.8
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 5.8e-31 137.9 139 61.9
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 1.7e-30 136.3 136 61.0
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 5.4e-29 131.3 136 60.3
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 3.9e-27 125.2 139 58.3
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 1.5e-26 123.2 139 52.5
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 4.3e-26 121.7 137 56.2
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 7.3e-26 120.9 137 55.5
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 1.3e-25 120.2 138 50.0
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 3.6e-25 118.6 136 58.8
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 8.1e-25 117.5 135 57.0
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 3.1e-24 115.5 139 56.1
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 6.9e-24 114.4 135 57.8
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 9.0e-24 114.0 135 56.3
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 1.2e-23 113.6 141 56.7
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 1.2e-23 113.6 141 56.7
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 1.2e-23 113.6 138 56.5
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 2.0e-23 112.8 141 56.7
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 2.0e-23 112.8 134 57.5
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 3.4e-23 112.1 136 54.4
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 7.6e-23 110.9 136 55.1
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 9.9e-23 110.5 132 54.5
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 3.8e-22 108.6 139 51.1
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 3.8e-22 108.6 141 53.9
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 3.8e-22 108.6 141 53.2
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 8.4e-22 107.5 141 52.5
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 1.1e-21 107.1 141 51.8
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 4.2e-21 105.1 134 51.5
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 5.4e-21 104.8 130 52.3
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 5.4e-21 104.8 144 52.1
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 1.2e-20 103.6 136 52.9
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 1.6e-20 103.2 144 50.7
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.6e-20 103.2 139 51.8
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.1e-20 102.8 79 67.1
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 2.1e-20 102.8 141 51.1
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 2.1e-20 102.8 143 51.7
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 3.5e-20 102.1 139 52.5
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 4.6e-20 101.7 108 54.6
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 4.6e-20 101.7 137 50.4
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 6.0e-20 101.3 131 51.9
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 6.0e-20 101.3 136 49.3
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 7.9e-20 100.9 136 51.5
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 7.9e-20 100.9 139 51.8
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 1.3e-19 100.1 138 51.4
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 1.3e-19 100.1 145 51.7
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 1.3e-19 100.1 80 61.2
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.8e-19 99.8 133 51.9
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 1.8e-19 99.8 139 48.9
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 1.8e-19 99.8 116 54.3
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 2.3e-19 99.4 148 47.3
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 3.9e-19 98.6 152 49.3
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 6.7e-19 97.8 135 51.9
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 6.7e-19 97.8 135 51.9
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 6.7e-19 97.8 113 53.1
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 8.7e-19 97.4 151 46.4
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 1.9e-18 96.3 140 49.3
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 2.5e-18 95.9 95 54.7
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 2.5e-18 95.9 139 48.2
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 3.3e-18 95.5 132 45.5
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 3.3e-18 95.5 130 47.7
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 4.3e-18 95.1 86 57.0
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 7.4e-18 94.4 136 48.5
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 7.4e-18 94.4 137 48.2
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 7.4e-18 94.4 145 48.3
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 9.6e-18 94.0 106 51.9
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 9.6e-18 94.0 142 48.6
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 9.6e-18 94.0 138 50.0
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 1.3e-17 93.6 116 50.9
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 1.3e-17 93.6 140 50.0
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 1.6e-17 93.2 122 50.0
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 2.1e-17 92.8 62 71.0
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 2.8e-17 92.4 154 48.1
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 6.2e-17 91.3 97 51.5
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 1.4e-16 90.1 131 47.3
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 1.4e-16 90.1 138 45.7
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 1.4e-16 90.1 69 65.2
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 1.8e-16 89.7 140 46.4
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 5.3e-16 88.2 121 48.8
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 6.9e-16 87.8 127 48.0
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 9.0e-16 87.4 146 44.5
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 9.0e-16 87.4 146 44.5
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 9.0e-16 87.4 146 44.5
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 2.0e-15 86.3 138 45.7
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 2.6e-15 85.9 151 40.4
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 3.4e-15 85.5 62 64.5
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 3.4e-15 85.5 148 44.6
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 4.5e-15 85.1 146 44.5
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 4.5e-15 85.1 146 44.5
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 4.5e-15 85.1 165 41.2
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 9.9e-15 84.0 134 45.5
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 1.7e-14 83.2 128 46.9
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 1.7e-14 83.2 134 44.8
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 2.9e-14 82.4 134 45.5
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 3.8e-14 82.0 140 45.7
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 6.4e-14 81.3 120 43.3
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 6.4e-14 81.3 133 46.6
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 1.2e-12 77.0 125 41.6
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 4.6e-12 75.1 48 72.9
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 1.0e-11 73.9 48 72.9
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 1.8e-11 73.2 46 73.9
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 3.0e-11 72.4 37 86.5
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 3.0e-11 72.4 48 68.8
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 6.7e-11 71.2 71 52.1
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 5.6e-10 68.2 52 59.6
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.3e-09 67.0 141 44.0
Lsat_1_v5_gn_5_96001 Lactuca sativa HOM05D005548 ORTHO05D029961 3.1e-08 62.4 97 44.3
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 6.9e-08 61.2 79 45.6
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 9.0e-08 60.8 64 54.7
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.0e-07 59.7 42 59.5
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 4.5e-07 58.5 116 35.3
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 5.8e-07 58.2 120 35.0


User provided reference genes

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