Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 5.6e-118 427.6 208 100.0
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 8.2e-77 290.8 209 70.3
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 8.8e-71 270.8 183 69.9
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 9.8e-70 267.3 208 66.3
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 2.8e-69 265.8 179 70.9
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 6.3e-69 264.6 209 63.6
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 8.3e-69 264.2 213 62.4
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 1.1e-68 263.8 208 63.5
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 1.4e-68 263.5 171 72.5
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 1.4e-68 263.5 211 61.6
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.8e-68 263.1 179 69.8
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 3.1e-68 262.3 203 65.5
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 5.4e-68 261.5 208 61.5
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 7.0e-68 261.2 212 63.2
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 9.1e-68 260.8 200 65.5
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 1.2e-67 260.4 210 59.5
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 2.7e-67 259.2 209 61.7
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 2.7e-67 259.2 217 60.4
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 2.7e-67 259.2 212 63.2
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 3.5e-67 258.8 207 62.8
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 5.9e-67 258.1 172 70.3
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 7.7e-67 257.7 177 70.6
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.0e-66 257.3 207 62.3
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 1.3e-66 256.9 211 64.0
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 1.7e-66 256.5 186 67.7
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 2.9e-66 255.8 202 63.9
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 2.9e-66 255.8 199 62.8
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 3.8e-66 255.4 187 67.9
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 8.6e-66 254.2 202 62.9
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 8.6e-66 254.2 204 63.7
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 8.6e-66 254.2 208 63.0
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 1.1e-65 253.8 212 62.7
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 1.5e-65 253.4 208 62.5
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.5e-65 253.4 203 63.5
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.9e-65 253.1 173 72.3
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.9e-65 253.1 210 62.9
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.5e-65 252.7 171 72.5
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 2.5e-65 252.7 208 62.0
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 4.2e-65 251.9 202 64.4
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 1.6e-64 250.0 176 69.3
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 1.6e-64 250.0 209 61.2
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 2.8e-64 249.2 211 62.1
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 8.0e-64 247.7 210 63.8
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.0e-63 247.3 222 56.3
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 1.8e-63 246.5 200 62.5
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 5.2e-63 245.0 171 67.8
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 6.8e-63 244.6 185 61.1
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 8.9e-63 244.2 200 60.5
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.2e-62 243.8 176 67.6
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.5e-62 243.4 176 66.5
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 2.6e-62 242.7 208 60.1
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 3.4e-62 242.3 232 56.9
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 4.4e-62 241.9 213 60.1
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 4.4e-62 241.9 211 59.7
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 4.4e-62 241.9 169 66.3
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.7e-61 240.0 171 67.3
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 1.7e-61 240.0 198 63.1
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.7e-61 240.0 200 61.5
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 3.7e-61 238.8 170 65.3
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 4.9e-61 238.4 175 65.7
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.1e-60 237.3 180 66.1
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 1.1e-60 237.3 204 56.4
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 1.4e-60 236.9 178 63.5
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 1.8e-60 236.5 171 64.9
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 1.8e-60 236.5 176 64.2
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.8e-60 236.5 217 57.1
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 3.1e-60 235.7 181 64.6
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 3.1e-60 235.7 176 64.8
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 4.1e-60 235.3 171 64.3
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 7.0e-60 234.6 208 58.7
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 7.0e-60 234.6 199 59.8
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.2e-59 233.8 171 64.3
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.6e-59 233.4 209 58.9
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.6e-59 233.4 231 53.2
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 2.7e-59 232.6 175 62.3
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 2.7e-59 232.6 183 63.9
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 3.5e-59 232.3 172 66.9
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 3.5e-59 232.3 172 66.9
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.5e-59 232.3 176 62.5
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 3.5e-59 232.3 217 56.7
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 7.8e-59 231.1 172 65.7
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.3e-58 230.3 210 56.2
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.3e-58 230.3 210 56.7
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 1.7e-58 229.9 212 55.2
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 2.9e-58 229.2 175 63.4
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.8e-58 228.8 176 68.2
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 8.6e-58 227.6 170 65.3
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.1e-57 227.3 186 62.4
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 1.5e-57 226.9 225 55.1
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 1.5e-57 226.9 170 65.3
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.5e-57 226.9 204 59.8
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 4.7e-56 221.9 215 56.3
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.4e-55 220.3 177 59.3
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.3e-55 219.5 214 56.1
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 3.1e-55 219.2 200 56.5
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 1.2e-54 217.2 166 62.0
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 3.4e-54 215.7 146 69.9
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 3.4e-54 215.7 222 50.9
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 4.9e-53 211.8 206 54.4
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 2.7e-51 206.1 194 53.1
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 1.0e-50 204.1 171 58.5
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 6.2e-48 194.9 180 56.7
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.1e-41 174.1 124 71.0
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 1.3e-37 160.6 160 52.5
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 1.7e-37 160.2 252 42.1
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 1.7e-37 160.2 227 39.6
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 3.2e-36 156.0 192 44.8
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 4.6e-35 152.1 196 44.4
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 6.0e-35 151.8 171 45.0
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 5.1e-34 148.7 172 43.6
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 5.1e-26 122.1 69 79.7
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 5.3e-23 112.1 89 61.8
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 9.0e-23 111.3 203 34.0
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 3.4e-22 109.4 212 31.6
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 4.4e-22 109.0 202 33.2
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 9.3e-20 101.3 194 28.9
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 4.3e-17 92.4 102 51.0
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 3.6e-16 89.4 102 48.0
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.5e-14 84.0 105 41.9
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 7.6e-14 81.6 130 36.9
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 2.4e-12 76.6 174 29.9


User provided reference genes

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