Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.5e-32 142.1 68 100.0
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.8e-31 137.5 66 97.0
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.6e-29 131.0 69 92.8
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 5.5e-14 80.5 38 92.1
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 5.5e-14 80.5 48 72.9
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 5.5e-14 80.5 37 97.3
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 7.2e-14 80.1 38 92.1
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 1.2e-13 79.3 38 89.5
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.2e-13 79.3 38 89.5
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.2e-13 79.3 37 94.6
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 1.6e-13 79.0 38 89.5
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 1.6e-13 79.0 38 89.5
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.6e-13 79.0 38 89.5
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.6e-13 79.0 38 89.5
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.6e-13 79.0 38 89.5
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 1.6e-13 79.0 38 89.5
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 1.6e-13 79.0 38 89.5
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 2.1e-13 78.6 38 89.5
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.1e-13 78.6 37 91.9
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.1e-13 78.6 37 91.9
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 2.1e-13 78.6 38 89.5
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 2.1e-13 78.6 38 89.5
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 2.1e-13 78.6 37 94.6
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 2.1e-13 78.6 38 89.5
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.7e-13 78.2 37 91.9
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 2.7e-13 78.2 38 89.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 2.7e-13 78.2 38 89.5
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 2.7e-13 78.2 38 89.5
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 2.7e-13 78.2 38 89.5
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 2.7e-13 78.2 38 89.5
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 2.7e-13 78.2 38 89.5
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 2.7e-13 78.2 38 89.5
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 3.6e-13 77.8 38 89.5
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 3.6e-13 77.8 38 89.5
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 3.6e-13 77.8 38 89.5
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 3.6e-13 77.8 38 89.5
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 3.6e-13 77.8 38 89.5
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.6e-13 77.8 38 89.5
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 3.6e-13 77.8 38 89.5
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 4.7e-13 77.4 38 86.8
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 4.7e-13 77.4 38 86.8
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 4.7e-13 77.4 38 86.8
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.7e-13 77.4 38 86.8
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 4.7e-13 77.4 38 86.8
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 6.1e-13 77.0 38 86.8
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 6.1e-13 77.0 37 91.9
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 6.1e-13 77.0 37 91.9
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 6.1e-13 77.0 37 91.9
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 6.1e-13 77.0 37 91.9
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 8.0e-13 76.6 39 87.2
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 8.0e-13 76.6 39 87.2
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 8.0e-13 76.6 38 86.8
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 8.0e-13 76.6 38 86.8
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 1.0e-12 76.3 38 86.8
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 1.0e-12 76.3 38 86.8
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.0e-12 76.3 38 86.8
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 1.4e-12 75.9 38 86.8
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.4e-12 75.9 38 86.8
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 1.8e-12 75.5 38 84.2
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 1.8e-12 75.5 38 84.2
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.8e-12 75.5 39 84.6
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.8e-12 75.5 39 84.6
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 1.8e-12 75.5 38 84.2
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.8e-12 75.5 38 84.2
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 1.8e-12 75.5 38 86.8
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.8e-12 75.5 38 86.8
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.8e-12 75.5 37 89.2
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 2.3e-12 75.1 37 89.2
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 2.3e-12 75.1 38 86.8
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 2.3e-12 75.1 38 86.8
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 2.3e-12 75.1 37 89.2
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 3.0e-12 74.7 38 84.2
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 3.0e-12 74.7 38 84.2
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 3.0e-12 74.7 38 84.2
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.0e-12 74.7 38 84.2
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.0e-12 74.7 38 84.2
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 4.0e-12 74.3 35 94.3
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 4.0e-12 74.3 38 84.2
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 5.2e-12 73.9 38 84.2
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 5.2e-12 73.9 38 81.6
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 5.2e-12 73.9 34 94.1
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 6.8e-12 73.6 38 81.6
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 6.8e-12 73.6 38 81.6
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 6.8e-12 73.6 36 88.9
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.5e-11 72.4 38 81.6
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 5.7e-11 70.5 32 93.8
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 5.7e-11 70.5 32 93.8
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 9.8e-11 69.7 34 88.2
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 1.3e-10 69.3 37 83.8
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 7.0e-09 63.5 41 68.3


User provided reference genes

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