Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011701 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.3e-44 181.8 87 100.0
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 2.4e-09 65.5 32 84.4
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 2.4e-09 65.5 33 78.8
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 3.4e-08 61.6 32 78.1
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 5.8e-08 60.8 33 78.8
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 5.8e-08 60.8 33 78.8
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 9.9e-08 60.1 34 73.5
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 1.3e-07 59.7 33 75.8
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 1.7e-07 59.3 32 75.0
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.7e-07 59.3 33 75.8
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.7e-07 59.3 32 75.0
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.7e-07 59.3 33 75.8
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 2.2e-07 58.9 32 75.0
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 2.2e-07 58.9 32 71.9
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 2.9e-07 58.5 33 69.7
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 2.9e-07 58.5 37 67.6
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 2.9e-07 58.5 32 75.0
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 3.8e-07 58.2 47 59.6
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 3.8e-07 58.2 32 75.0
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 4.9e-07 57.8 33 72.7
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 4.9e-07 57.8 33 72.7
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 4.9e-07 57.8 32 71.9
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 4.9e-07 57.8 33 72.7
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 4.9e-07 57.8 32 71.9
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 4.9e-07 57.8 32 71.9
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.1e-06 56.6 33 69.7
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 1.1e-06 56.6 33 72.7
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.1e-06 56.6 33 72.7
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.1e-06 56.6 32 71.9
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.9e-06 55.8 33 72.7
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 1.9e-06 55.8 33 69.7
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 2.4e-06 55.5 33 69.7
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 3.2e-06 55.1 42 59.5
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 4.2e-06 54.7 33 66.7
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 4.2e-06 54.7 31 67.7
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 4.2e-06 54.7 32 68.8
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 4.2e-06 54.7 33 69.7
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 5.4e-06 54.3 32 68.8
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 5.4e-06 54.3 33 69.7
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 7.1e-06 53.9 33 69.7
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 7.1e-06 53.9 32 68.8
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 7.1e-06 53.9 33 69.7
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 9.3e-06 53.5 32 71.9
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 9.3e-06 53.5 33 63.6
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 9.3e-06 53.5 33 66.7
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 9.3e-06 53.5 32 68.8


User provided reference genes

Program Settings