Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011677 Camellia sinensis var. sinensis HOM05D007260 ORTHO05D009149 4.9e-60 234.2 112 100.0
vmacro21973 Vaccinium macrocarpon HOM05D007260 ORTHO05D009149 1.4e-38 162.9 106 75.5
TAR633G2662 Trochodendron aralioides HOM05D007260 ORTHO05D009149 3.4e-37 158.3 106 67.9
Lj1C1126T6 Lonicera japonica HOM05D007260 ORTHO05D009149 4.5e-37 157.9 112 67.0
Cfa016789 Carpinus fangiana HOM05D007260 ORTHO05D009149 2.9e-36 155.2 106 69.8
GSVIVG01033239001 Vitis vinifera HOM05D007260 ORTHO05D009149 6.5e-36 154.1 106 67.0
CsaV3_6G012930 Cucumis sativus L. HOM05D007260 ORTHO05D009149 1.1e-35 153.3 110 59.1
QL07p003043 Quercus lobata HOM05D007260 ORTHO05D009149 5.5e-35 151.0 106 67.9
DCAR_020507 Daucus carota HOM05D007260 ORTHO05D009149 7.2e-35 150.6 106 65.1
CiPaw.10G035100 Carya illinoinensis HOM05D007260 ORTHO05D009149 9.4e-35 150.2 106 67.9
Sed0015422 Sechium edule HOM05D007260 ORTHO05D009149 9.4e-35 150.2 111 59.5
PSO063G4612 Papaver somniferum HOM05D007260 ORTHO05D009149 2.7e-34 148.7 105 64.8
TWI74G0992 Tripterygium wilfordii HOM05D007260 ORTHO05D009149 4.7e-34 147.9 106 65.1
Nn2g15147 Nelumbo nucifera HOM05D007260 ORTHO05D009149 6.1e-34 147.5 106 65.1
PSO782G2785 Papaver somniferum HOM05D007260 ORTHO05D009149 7.9e-34 147.1 102 64.7
Duzib106G0310 Durio zibethinus HOM05D007260 ORTHO05D009149 1.0e-33 146.7 106 66.0
ClCG04G003650 Citrullus lanatus HOM05D007260 ORTHO05D009149 1.8e-33 146.0 106 58.5
COL.COLO4_22299 Corchorus olitorius HOM05D007260 ORTHO05D009149 1.8e-33 146.0 106 67.9
Potri.006G046350 Populus trichocarpa HOM05D007260 ORTHO05D009149 3.9e-33 144.8 106 64.2
SalBow6G0663 Salvia bowleyana HOM05D007260 ORTHO05D009149 6.7e-33 144.1 105 64.8
SalBow6G2074 Salvia bowleyana HOM05D007260 ORTHO05D009149 6.7e-33 144.1 105 64.8
MELO3C013619.2 Cucumis melo HOM05D007260 ORTHO05D009149 1.1e-32 143.3 106 59.4
MSTRG.19844 Avicennia marina HOM05D007260 ORTHO05D009149 2.6e-32 142.1 106 63.2
Thecc.05G151300 Theobroma cacao HOM05D007260 ORTHO05D009149 4.4e-32 141.4 106 65.1
Gohir.A02G107109 Gossypium hirsutum HOM05D007260 ORTHO05D009149 1.3e-31 139.8 106 64.2
Oeu023130.1 Olea europaea HOM05D007260 ORTHO05D009149 1.7e-31 139.4 105 63.8
Sabra06G0031900 Salix brachista HOM05D007260 ORTHO05D009149 2.2e-31 139.0 106 62.3
Gorai.003G087400 Gossypium raimondii HOM05D007260 ORTHO05D009149 4.8e-31 137.9 105 63.8
Ciclev10005732m.g Citrus clementina HOM05D007260 ORTHO05D009149 6.3e-31 137.5 106 62.3
Migut.J01731 Erythranthe guttata HOM05D007260 ORTHO05D009149 6.3e-31 137.5 106 61.3
Eucgr.K01719 Eucalyptus grandis HOM05D007260 ORTHO05D009149 6.3e-31 137.5 106 60.4
Gohir.D03G072400 Gossypium hirsutum HOM05D007260 ORTHO05D009149 6.3e-31 137.5 105 63.8
MBI13_g10219_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 1.1e-30 136.7 105 61.9
CANSAT80G1528 Cannabis sativa HOM05D007260 ORTHO05D009149 5.3e-30 134.4 105 58.1
Cc06_g17880 Coffea canephora HOM05D007260 ORTHO05D009149 6.9e-30 134.0 102 60.8
MD14G1076800 Malus domestica HOM05D007260 ORTHO05D009149 9.1e-30 133.7 106 62.3
CANSAT80G0389 Cannabis sativa HOM05D007260 ORTHO05D009149 1.2e-29 133.3 105 58.1
Cpa.g.sc182.9 Carica papaya HOM05D007260 ORTHO05D009149 2.0e-29 132.5 105 58.1
Eucgr.K02009 Eucalyptus grandis HOM05D007260 ORTHO05D009149 1.7e-28 129.4 106 58.5
Glyma.03G134300 Glycine max HOM05D007260 ORTHO05D009149 1.7e-28 129.4 102 59.8
Aqoxy1G00296 Aquilegia oxysepala HOM05D007260 ORTHO05D009149 2.2e-28 129.0 110 53.6
Lsat_1_v5_gn_5_160501 Lactuca sativa HOM05D007260 ORTHO05D009149 3.8e-28 128.3 106 56.6
RcHm_v2.0_Chr3g0483391 Rosa chinensis HOM05D007260 ORTHO05D009149 3.8e-28 128.3 106 62.3
Atru.chr1.1150 Acer truncatum HOM05D007260 ORTHO05D009149 8.5e-28 127.1 105 57.1
ECA248G0818 Erigeron canadensis HOM05D007260 ORTHO05D009149 8.5e-28 127.1 106 55.7
Glyma.19G136500 Glycine max HOM05D007260 ORTHO05D009149 8.5e-28 127.1 102 58.8
Lj1g0013385 Lotus japonicus HOM05D007260 ORTHO05D009149 8.5e-28 127.1 110 57.3
Rhsim03G0028400 Rhododendron simsii HOM05D007260 ORTHO05D009149 8.5e-28 127.1 107 59.8
HanXRQChr13g0396001 Helianthus annuus HOM05D007260 ORTHO05D009149 2.5e-27 125.6 106 57.5
Lalb_Chr01g0017381 Lupinus albus HOM05D007260 ORTHO05D009149 2.5e-27 125.6 106 58.5
Ca_08430_v3 Cicer arietinum L. HOM05D007260 ORTHO05D009149 9.4e-27 123.6 106 55.7
Prupe.7G054700 Prunus persica HOM05D007260 ORTHO05D009149 9.4e-27 123.6 106 59.4
arahy.Tifrunner.gnm1.ann1.QMP5TS Arachis hypogaea HOM05D007260 ORTHO05D009149 1.6e-26 122.9 104 57.7
arahy.Tifrunner.gnm1.ann1.HX298U Arachis hypogaea HOM05D007260 ORTHO05D009149 3.6e-26 121.7 104 58.7
Nitab4.5_0000826g0300 Nicotiana tabacum HOM05D007260 ORTHO05D009149 6.1e-26 120.9 108 59.3
Nitab4.5_0006870g0020 Nicotiana tabacum HOM05D007260 ORTHO05D009149 1.0e-25 120.2 108 59.3
Phvul.008G158118 Phaseolus vulgaris HOM05D007260 ORTHO05D009149 1.0e-25 120.2 102 57.8
TPR.G18237 Trifolium pratense HOM05D007260 ORTHO05D009149 1.4e-25 119.8 98 59.2
VMungo1309G2091 Vigna mungo HOM05D007260 ORTHO05D009149 1.8e-25 119.4 102 58.8
MBI13_g36811_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 3.0e-25 118.6 106 55.7
Medtr7g091050 Medicago truncatula HOM05D007260 ORTHO05D009149 1.1e-24 116.7 106 54.7
SGA_v2.0_scaffold105G30380 Striga asiatica HOM05D007260 ORTHO05D009149 1.5e-24 116.3 105 53.3
AUR62024501 Chenopodium quinoa HOM05D007260 ORTHO05D009149 2.6e-24 115.5 106 50.0
PGSC0003DMG401012695 Solanum tuberosum HOM05D007260 ORTHO05D009149 2.6e-24 115.5 115 55.7
Psat3g074400 Pisum sativum HOM05D007260 ORTHO05D009149 4.4e-24 114.8 98 58.2
A04p31710 Brassica napus HOM05D007260 ORTHO05D009149 7.4e-24 114.0 105 54.3
BraA04t18628Z Brassica rapa HOM05D007260 ORTHO05D009149 7.4e-24 114.0 105 54.3
AT2G41600 Arabidopsis thaliana HOM05D007260 ORTHO05D009149 9.7e-24 113.6 108 49.1
BcaB06g29191 Brassica carinata HOM05D007260 ORTHO05D009149 1.7e-23 112.8 105 54.3
FvH4_6g24410 Fragaria vesca HOM05D007260 ORTHO05D009149 1.7e-23 112.8 108 53.7
AUR62026087 Chenopodium quinoa HOM05D007260 ORTHO05D009149 2.2e-23 112.5 106 49.1
Sp4g23850 Schrenkiella parvula HOM05D007260 ORTHO05D009149 3.7e-23 111.7 106 52.8
Carub.0004s2386 Capsella rubella HOM05D007260 ORTHO05D009149 6.3e-23 110.9 108 50.9
Sc25g0005370 Simmondsia chinensis HOM05D007260 ORTHO05D009149 8.2e-23 110.5 112 50.0
Aa31LG1G23620 Aethionema arabicum HOM05D007260 ORTHO05D009149 1.1e-22 110.2 101 56.4
EL10Ac3g07131 Beta vulgaris HOM05D007260 ORTHO05D009149 1.1e-22 110.2 106 46.2
CAN.G676.12 Capsicum annuum HOM05D007260 ORTHO05D009149 1.4e-22 109.8 114 55.3
Manes.09G018400 Manihot esculenta HOM05D007260 ORTHO05D009149 1.4e-22 109.8 107 50.5
Sopen04g008360 Solanum pennellii HOM05D007260 ORTHO05D009149 2.4e-22 109.0 112 52.7
C04p69130 Brassica napus HOM05D007260 ORTHO05D009149 3.1e-22 108.6 105 51.4
Ah.13g076600 Amaranthus hybridus HOM05D007260 ORTHO05D009149 4.1e-22 108.2 101 49.5
BcaC02g07303 Brassica carinata HOM05D007260 ORTHO05D009149 9.1e-22 107.1 105 52.4
BolC4t28410H Brassica oleracea HOM05D007260 ORTHO05D009149 9.1e-22 107.1 105 52.4
Thhalv10017244m.g Eutrema salsugineum HOM05D007260 ORTHO05D009149 9.1e-22 107.1 105 50.5
THA.LOC104802057 Tarenaya hassleriana HOM05D007260 ORTHO05D009149 1.6e-21 106.3 107 50.5
AL4G39670 Arabidopsis lyrata HOM05D007260 ORTHO05D009149 3.5e-21 105.1 108 45.4
CARHR136700 Cardamine hirsuta HOM05D007260 ORTHO05D009149 4.5e-21 104.8 108 49.1
FAN02G1162 Fragaria x ananassa HOM05D007260 ORTHO05D009149 5.0e-20 101.3 113 48.7
MBI13_g37004_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 6.5e-20 100.9 133 45.9
CDE04G0457 Ceratophyllum demersum HOM05D007260 ORTHO05D009149 8.5e-20 100.5 99 48.5
Hund19138 Selenicereus undatus HOM05D007260 ORTHO05D009149 3.2e-19 98.6 107 45.8
Actinidia39206 Actinidia chinensis HOM05D007260 ORTHO05D009149 3.6e-18 95.1 54 79.6
Hma1.2p1_0110F.1_g052790 Hydrangea macrophylla HOM05D007260 ORTHO05D009149 2.6e-16 89.0 55 72.7
unitig_8.g3500 Utricularia gibba HOM05D000800 ORTHO05D000658 9.7e-16 87.0 86 50.0
Zm00001eb405200 Zea mays HOM05D007260 ORTHO05D009149 9.7e-16 87.0 111 41.4
Os11g0140100 Oryza sativa ssp. japonica HOM05D007260 ORTHO05D009149 4.1e-14 81.6 108 41.7
Lj1P1128T41 Lonicera japonica HOM05D007260 ORTHO05D009149 3.5e-13 78.6 54 63.0
Haze_19810 Corylus avellana HOM05D007260 ORTHO05D009149 7.7e-13 77.4 54 66.7
Haze_19813 Corylus avellana HOM05D007260 ORTHO05D009149 7.7e-13 77.4 54 66.7
ATR0188G026 Amborella trichopoda HOM05D007260 ORTHO05D009149 5.0e-12 74.7 54 57.4
Solyc04g016250.3 Solanum lycopersicum HOM05D007260 ORTHO05D009149 7.2e-11 70.9 74 52.7
Peaxi162Scf00130g00720 Petunia axillaris HOM05D007260 ORTHO05D009149 7.5e-08 60.8 54 59.3
SMO197G0050 Selaginella moellendorffii HOM05D001009 ORTHO05D000829 7.5e-08 60.8 106 31.1
Pp3c12_23320 Physcomitrium patens HOM05D001009 ORTHO05D000829 8.3e-07 57.4 105 31.4
EL10Ac9g22225 Beta vulgaris HOM05D001009 ORTHO05D000829 1.4e-06 56.6 105 26.7
MSTRG.11173 Avicennia marina HOM05D001009 ORTHO05D000829 2.4e-06 55.8 95 30.5
Sed0016308 Sechium edule HOM05D001009 ORTHO05D000829 3.1e-06 55.5 100 34.0
Os01g0143300 Oryza sativa ssp. japonica HOM05D001009 ORTHO05D000829 4.1e-06 55.1 106 32.1
Lalb_Chr17g0346401 Lupinus albus HOM05D001009 ORTHO05D000829 5.4e-06 54.7 105 30.5
Mapoly0001s0479 Marchantia polymorpha HOM05D001009 ORTHO05D000829 9.1e-06 53.9 79 30.4
Os06g0326500 Oryza sativa ssp. japonica HOM05D001009 ORTHO05D000829 9.1e-06 53.9 105 30.5
TWI74G1509 Tripterygium wilfordii HOM05D001009 ORTHO05D000829 9.1e-06 53.9 61 37.7


User provided reference genes

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