Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011674 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.7e-45 183.7 84 100.0
CSS0002781 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.2e-27 123.2 83 69.9
CSS0017812 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.2e-27 123.2 83 68.7
Rhsim11G0149500 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.6e-23 111.3 84 58.3
CSS0034647 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.0e-21 105.5 85 61.2
CSS0025077 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.8e-21 104.0 85 61.2
Rhsim01G0139300 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.2e-20 102.1 84 56.0
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.9e-20 101.7 84 56.0
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.7e-20 101.3 84 56.0
Rhsim08G0178900 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.9e-20 100.9 76 61.8
Rhsim04G0047200 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.4e-20 100.5 84 57.1
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.1e-19 99.8 84 50.0
RhsimUnG0247100 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.1e-19 97.8 84 58.3
Rhsim12G0079800 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.4e-19 97.4 84 52.4
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 1.5e-16 89.4 81 51.9
Rhsim03G0083500 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.8e-15 85.1 82 45.1
Rhsim01G0274800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-14 82.8 81 48.1
Rhsim01G0092300 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.4e-14 82.0 81 48.1
Rhsim11G0021500 Rhododendron simsii HOM05D002187 ORTHO05D002243 2.4e-14 82.0 78 50.0
RhsimUnG0224600 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.1e-14 81.6 81 50.6
Rhsim04G0242400 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.2e-14 80.9 82 42.7
Rhsim01G0048000 Rhododendron simsii HOM05D000003 ORTHO05D000006 8.9e-14 80.1 81 48.1
Rhsim01G0140300 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.9e-14 80.1 81 49.4
Rhsim09G0070000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.2e-13 79.7 83 43.4
Rhsim03G0080700 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.0e-13 79.0 82 42.7
Rhsim08G0169600 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.6e-13 78.6 82 45.1
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 4.4e-13 77.8 78 43.6
Rhsim09G0068100 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.4e-13 77.8 81 45.7
Rhsim02G0152800 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.8e-13 77.4 82 42.7
Rhsim02G0217100 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.8e-13 77.4 76 46.1
Rhsim02G0177800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.3e-12 76.3 81 45.7
Rhsim02G0238600 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.3e-12 76.3 76 46.1
Rhsim02G0107700 Rhododendron simsii HOM05D000048 ORTHO05D000006 1.7e-12 75.9 76 44.7
Rhsim05G0162800 Rhododendron simsii HOM05D001637 ORTHO05D000006 1.7e-12 75.9 81 45.7
Rhsim10G0112100 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.7e-12 75.9 81 46.9
Rhsim03G0167500 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-12 75.5 81 46.9
Rhsim03G0108700 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.9e-12 74.3 81 48.1
Rhsim09G0064700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.9e-12 74.3 85 40.0
Rhsim09G0065000 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.9e-12 74.3 85 40.0
Rhsim08G0131400 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.4e-12 73.9 58 55.2
Rhsim03G0009500 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-11 72.8 81 45.7
Rhsim07G0114000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.9e-11 72.4 76 40.8
RhsimUnG0155100 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.9e-11 72.4 74 39.2
Rhsim01G0175200 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.1e-11 70.5 76 43.4
TAR536G0010 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.2e-10 69.7 84 41.7
Rhsim02G0229500 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.1e-10 68.9 76 39.5
Rhsim06G0096800 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.1e-10 68.9 76 43.4
vmacro07385 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 2.1e-10 68.9 74 39.2
Rhsim01G0110800 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.6e-10 67.8 76 39.5
Rhsim12G0088700 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.0e-10 67.4 78 43.6
Rhsim05G0135000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.7e-09 65.9 78 38.5
Rhsim02G0134700 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.3e-09 65.5 67 49.3
PSO040G0023 Papaver somniferum HOM05D000003 ORTHO05D000006 3.0e-09 65.1 82 35.4
Rhsim02G0151600 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.9e-09 64.7 76 43.4
Actinidia31222 Actinidia chinensis HOM05D000003 ORTHO05D000006 6.6e-09 63.9 49 59.2
Rhsim09G0083100 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.5e-08 62.8 76 42.1
vmacro05354 Vaccinium macrocarpon HOM05D002580 ORTHO05D002811 1.5e-08 62.8 70 37.1
RhsimUnG0081000 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.3e-08 61.6 75 40.0
Rhsim08G0187900 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.3e-08 60.5 76 42.1
FvH4_6g23032 Fragaria vesca HOM05D000003 ORTHO05D017879 1.2e-07 59.7 83 37.3
PSO675G0655 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-07 59.7 81 35.8
Rhsim11G0048600 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.6e-07 59.3 58 48.3
Rhsim05G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.8e-07 58.5 53 45.3
Rhsim05G0192100 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.6e-07 58.2 56 46.4
Rhsim11G0006400 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.6e-07 58.2 81 38.3
Ah.10g031070 Amaranthus hybridus HOM05D000003 ORTHO05D000006 4.7e-07 57.8 81 35.8
PSO782G0225 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-06 56.6 81 34.6
Rhsim08G0119400 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.1e-06 56.6 53 41.5
Aa31LG1G5100 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-06 56.2 64 43.8
FvH4_1g17821 Fragaria vesca HOM05D000003 ORTHO05D046457 1.4e-06 56.2 70 38.6
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-06 55.8 83 37.3
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-06 55.1 83 34.9
Rhsim09G0090900 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.1e-06 55.1 46 52.2
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-06 54.7 83 37.3
COL.COLO4_08414 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.0e-06 54.7 51 43.1
PSO447G0142 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-06 54.7 55 43.6
CANSAT11G0839 Cannabis sativa HOM05D000003 ORTHO05D000006 5.2e-06 54.3 68 35.3
FvH4_6g23371 Fragaria vesca HOM05D000003 ORTHO05D000006 5.2e-06 54.3 75 36.0
PSO455G0056 Papaver somniferum HOM05D000003 ORTHO05D000006 5.2e-06 54.3 72 36.1
BcaB08g34387 Brassica carinata HOM05D000003 ORTHO05D000006 6.9e-06 53.9 83 37.3
PSO210G0481 Papaver somniferum HOM05D000003 ORTHO05D000006 6.9e-06 53.9 72 34.7
Aa31sc92G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.0e-06 53.5 79 34.2
BolC6t38788H Brassica oleracea HOM05D000385 ORTHO05D027499 9.0e-06 53.5 68 36.8
Carub.0002s0960 Capsella rubella HOM05D000003 ORTHO05D000006 9.0e-06 53.5 83 36.1


User provided reference genes

Program Settings