Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011663 Camellia sinensis var. sinensis HOM05D005458 ORTHO05D005672 2.5e-23 111.7 76 100.0
CSS0011220 Camellia sinensis var. sinensis HOM05D005458 ORTHO05D005672 5.8e-12 73.9 41 100.0
Ciclev10006390m.g Citrus clementina HOM05D005458 ORTHO05D005672 4.6e-09 64.3 44 88.6
Cc03_g07880 Coffea canephora HOM05D005458 ORTHO05D005672 3.0e-08 61.6 42 88.1
CiPaw.01G120800 Carya illinoinensis HOM05D005458 ORTHO05D005672 5.1e-08 60.8 64 62.5
Nn1g07886 Nelumbo nucifera HOM05D005458 ORTHO05D005672 1.1e-07 59.7 63 61.9
Potri.017G055501 Populus trichocarpa HOM05D005458 ORTHO05D005672 1.1e-07 59.7 63 61.9
TWI75G0430 Tripterygium wilfordii HOM05D005458 ORTHO05D005672 3.3e-07 58.2 63 60.3
GSVIVG01021052001 Vitis vinifera HOM05D005458 ORTHO05D005672 4.3e-07 57.8 44 77.3
Hma1.2p1_0187F.1_g082170 Hydrangea macrophylla HOM05D005458 ORTHO05D005672 5.6e-07 57.4 45 77.8
THA.LOC104804811 Tarenaya hassleriana HOM05D005458 ORTHO05D005672 5.6e-07 57.4 45 82.2
Zm00001eb287790 Zea mays HOM05D005458 ORTHO05D005672 7.3e-07 57.0 45 77.8
PSO017G2416 Papaver somniferum HOM05D005458 ORTHO05D005672 9.6e-07 56.6 62 58.1
PSO063G0044 Papaver somniferum HOM05D005458 ORTHO05D005672 9.6e-07 56.6 62 58.1
unitig_736.g22466 Utricularia gibba HOM05D005458 ORTHO05D005672 9.6e-07 56.6 47 68.1
CsaV3_2G011550 Cucumis sativus L. HOM05D005458 ORTHO05D005672 1.2e-06 56.2 63 60.3
Eucgr.H00051 Eucalyptus grandis HOM05D005458 ORTHO05D005672 1.2e-06 56.2 62 59.7
Hma1.2p1_1407F.1_g281420 Hydrangea macrophylla HOM05D000434 ORTHO05D005672 1.2e-06 56.2 39 82.1
Manes.15G054000 Manihot esculenta HOM05D005458 ORTHO05D005672 1.2e-06 56.2 62 59.7
Actinidia39967 Actinidia chinensis HOM05D005458 ORTHO05D005672 1.6e-06 55.8 41 82.9
Aqoxy2G03857 Aquilegia oxysepala HOM05D005458 ORTHO05D005672 1.6e-06 55.8 45 80.0
MD04G1009100 Malus domestica HOM05D005458 ORTHO05D005672 1.6e-06 55.8 42 78.6
Prupe.1G008500 Prunus persica HOM05D005458 ORTHO05D005672 2.1e-06 55.5 40 82.5
Sc19g0007160 Simmondsia chinensis HOM05D005458 ORTHO05D005672 2.8e-06 55.1 41 80.5
Glyma.08G351700 Glycine max HOM05D005458 ORTHO05D005672 3.6e-06 54.7 57 64.9
Glyma.18G164200 Glycine max HOM05D005458 ORTHO05D005672 3.6e-06 54.7 37 89.2
Prupe.8G201600 Prunus persica HOM05D005458 ORTHO05D005672 3.6e-06 54.7 37 81.1
CAN.G1635.9 Capsicum annuum HOM05D005458 ORTHO05D005672 4.7e-06 54.3 61 62.3
ECA248G3568 Erigeron canadensis HOM05D000609 ORTHO05D000462 4.7e-06 54.3 58 60.3
Haze_11612 Corylus avellana HOM05D005458 ORTHO05D005672 6.2e-06 53.9 70 75.7
Migut.N00389 Erythranthe guttata HOM05D005458 ORTHO05D005672 6.2e-06 53.9 41 80.5
Lsat_1_v5_gn_6_60280 Lactuca sativa HOM05D005458 ORTHO05D005672 6.2e-06 53.9 60 56.7
Manes.03G147401 Manihot esculenta HOM05D005458 ORTHO05D005672 6.2e-06 53.9 44 75.0
Rhsim02G0057300 Rhododendron simsii HOM05D005458 ORTHO05D005672 6.2e-06 53.9 51 60.8
Hund16751 Selenicereus undatus HOM05D005458 ORTHO05D005672 6.2e-06 53.9 42 78.6
Aa31LG8G10780 Aethionema arabicum HOM05D005458 ORTHO05D005672 8.1e-06 53.5 44 77.3
Ah.13g078150 Amaranthus hybridus HOM05D002428 ORTHO05D000462 8.1e-06 53.5 58 56.9
ClCG06G007830 Citrullus lanatus HOM05D005458 ORTHO05D005672 8.1e-06 53.5 51 62.7
Potri.014G056600 Populus trichocarpa HOM05D005458 ORTHO05D005672 8.1e-06 53.5 39 82.1


User provided reference genes

Program Settings