Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011640 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 2.4e-143 512.3 281 100.0
Hma1.2p1_0399F.1_g143920 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 1.1e-87 327.4 291 67.0
Dinv33022 Davidia involucrata HOM05D001646 ORTHO05D001572 5.0e-85 318.5 294 67.7
CSS0039057 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 1.6e-78 297.0 268 70.1
TAR362G0972 Trochodendron aralioides HOM05D000179 ORTHO05D000107 4.7e-75 285.4 298 60.4
Manes.05G065500 Manihot esculenta HOM05D000179 ORTHO05D000107 8.0e-75 284.6 290 61.4
Duzib138G1955 Durio zibethinus HOM05D000179 ORTHO05D000107 3.0e-74 282.7 284 58.8
Thecc.01G294200 Theobroma cacao HOM05D000179 ORTHO05D000107 6.8e-74 281.6 286 58.4
Duzib133G0348 Durio zibethinus HOM05D000179 ORTHO05D000107 3.4e-73 279.3 284 58.8
Potri.002G208444 Populus trichocarpa HOM05D000179 ORTHO05D000107 6.3e-72 275.0 295 61.4
Gohir.D11G121400 Gossypium hirsutum HOM05D000179 ORTHO05D000107 9.1e-71 271.2 282 59.2
Gorai.007G130100 Gossypium raimondii HOM05D000179 ORTHO05D000107 1.7e-69 266.9 285 58.6
Actinidia21061 Actinidia chinensis HOM05D000179 ORTHO05D000107 8.6e-69 264.6 289 60.9
Gorai.004G088400 Gossypium raimondii HOM05D000179 ORTHO05D000107 1.5e-68 263.8 288 57.3
Gohir.D08G084000 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.5e-68 263.1 288 56.9
Lj1A35T64 Lonicera japonica HOM05D000179 ORTHO05D000107 7.2e-68 261.5 291 59.5
COL.COLO4_07997 Corchorus olitorius HOM05D000179 ORTHO05D000107 9.5e-68 261.2 287 57.1
Gohir.A11G116200 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.8e-67 259.6 288 57.3
Dinv19732 Davidia involucrata HOM05D000179 ORTHO05D000107 8.0e-67 258.1 289 60.9
Potri.014G132700 Populus trichocarpa HOM05D000179 ORTHO05D000107 1.5e-65 253.8 292 57.5
Gohir.A08G074900 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.0e-65 253.4 287 55.4
GSVIVG01010961001 Vitis vinifera HOM05D000179 ORTHO05D000107 9.2e-63 244.6 261 59.0
TAR365G0896 Trochodendron aralioides HOM05D000179 ORTHO05D000107 1.2e-62 244.2 294 55.1
TAR633G2053 Trochodendron aralioides HOM05D000179 ORTHO05D000107 2.9e-61 239.6 290 53.8
Oeu046706.1 Olea europaea HOM05D000179 ORTHO05D000107 8.6e-61 238.0 283 54.4
Aqoxy5G00698 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 1.9e-60 236.9 311 51.8
Actinidia32245 Actinidia chinensis HOM05D000179 ORTHO05D000107 1.2e-59 234.2 282 57.8
Nn3g21401 Nelumbo nucifera HOM05D000179 ORTHO05D000107 7.5e-57 224.9 301 52.5
QL12p030551 Quercus lobata HOM05D000179 ORTHO05D000107 7.5e-57 224.9 295 54.6
TWI59G0153 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 2.2e-56 223.4 325 53.8
DCAR_012403 Daucus carota HOM05D000179 ORTHO05D000107 1.4e-55 220.7 298 54.7
Atru.chr5.1229 Acer truncatum HOM05D000179 ORTHO05D000107 4.6e-54 215.7 295 54.6
CiPaw.07G103800 Carya illinoinensis HOM05D000179 ORTHO05D000107 7.8e-54 214.9 259 59.1
Actinidia09161 Actinidia chinensis HOM05D000179 ORTHO05D000107 3.6e-51 206.1 282 52.8
TWI23G0643 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 3.1e-50 203.0 308 53.6
VMungo1383G3472 Vigna mungo HOM05D000179 ORTHO05D000107 2.0e-49 200.3 289 48.8
Glyma.19G208900 Glycine max HOM05D000179 ORTHO05D000107 9.8e-49 198.0 290 47.2
Cfa005984 Carpinus fangiana HOM05D000179 ORTHO05D000107 1.3e-48 197.6 258 57.4
Cpa.g.sc9.191 Carica papaya HOM05D000179 ORTHO05D000107 7.0e-47 191.8 347 49.0
Phvul.001G204700 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 1.6e-46 190.7 288 46.5
ECA248G0948 Erigeron canadensis HOM05D000179 ORTHO05D000107 6.0e-46 188.7 300 49.7
Oeu013023.1 Olea europaea HOM05D000179 ORTHO05D000107 1.3e-45 187.6 208 58.2
MD11G1302300 Malus domestica HOM05D000179 ORTHO05D000107 2.3e-45 186.8 317 49.5
DCAR_002807 Daucus carota HOM05D000179 ORTHO05D000107 1.5e-44 184.1 286 49.7
Lj1g0027872 Lotus japonicus HOM05D000179 ORTHO05D000107 3.3e-44 183.0 291 44.0
Phvul.007G165133 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 9.5e-44 181.4 290 48.3
Ciclev10023420m.g Citrus clementina HOM05D000179 ORTHO05D000107 2.1e-43 180.3 287 48.8
Cc01_g20530 Coffea canephora HOM05D000179 ORTHO05D000107 3.6e-43 179.5 285 48.1
Glyma.03G211700 Glycine max HOM05D000179 ORTHO05D000107 8.1e-43 178.3 290 45.2
Rhsim13G0014900 Rhododendron simsii HOM05D000179 ORTHO05D000107 1.2e-41 174.5 292 46.6
Oeu047465.1 Olea europaea HOM05D000179 ORTHO05D000107 1.5e-41 174.1 286 48.6
Haze_04859 Corylus avellana HOM05D000179 ORTHO05D000107 2.0e-41 173.7 261 50.2
Nitab4.5_0001697g0070 Nicotiana tabacum HOM05D000179 ORTHO05D000107 1.3e-40 171.0 286 47.6
Aqoxy2G03027 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 1.9e-39 167.2 293 44.4
Psat3g023360 Pisum sativum HOM05D000179 ORTHO05D000107 2.4e-39 166.8 292 44.5
Nn5g30062 Nelumbo nucifera HOM05D000179 ORTHO05D000107 1.2e-38 164.5 297 42.8
Prupe.8G255800 Prunus persica HOM05D000179 ORTHO05D000107 6.0e-38 162.2 316 44.9
CANSAT25G2031 Cannabis sativa HOM05D000179 ORTHO05D000107 1.9e-36 157.1 314 47.5
vmacro02486 Vaccinium macrocarpon HOM05D000179 ORTHO05D000107 3.3e-36 156.4 217 54.4
MD03G1283900 Malus domestica HOM05D000179 ORTHO05D000107 4.3e-36 156.0 318 43.1
PGR119G1220 Punica granatum HOM05D000179 ORTHO05D000107 5.6e-36 155.6 320 45.0
MSTRG.18177 Avicennia marina HOM05D000179 ORTHO05D000107 9.5e-36 154.8 285 44.2
CAN.G1562.5 Capsicum annuum HOM05D000179 ORTHO05D000107 1.2e-35 154.5 297 46.5
HanXRQChr11g0330071 Helianthus annuus HOM05D000179 ORTHO05D000107 2.1e-35 153.7 291 45.0
Glyma.02G153900 Glycine max HOM05D000179 ORTHO05D000107 4.7e-35 152.5 294 42.5
Gohir.D12G009800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 6.2e-35 152.1 286 44.4
Lsat_1_v5_gn_5_189320 Lactuca sativa HOM05D000179 ORTHO05D000107 1.1e-34 151.4 295 45.1
RcHm_v2.0_Chr6g0293211 Rosa chinensis HOM05D000179 ORTHO05D000107 1.1e-34 151.4 304 44.1
TPR.G9290 Trifolium pratense HOM05D000179 ORTHO05D000107 1.1e-34 151.4 289 41.2
Gohir.A12G009800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.8e-34 150.6 286 43.4
Ca_09135_v3 Cicer arietinum L. HOM05D000179 ORTHO05D000107 2.4e-34 150.2 288 42.4
Gorai.008G009800 Gossypium raimondii HOM05D000179 ORTHO05D000107 3.1e-34 149.8 286 44.1
arahy.Tifrunner.gnm1.ann1.AY8SNM Arachis hypogaea HOM05D000179 ORTHO05D000107 4.0e-34 149.4 301 44.9
arahy.Tifrunner.gnm1.ann1.EPUL7W Arachis hypogaea HOM05D000179 ORTHO05D000107 5.2e-34 149.1 301 44.9
PSO210G6278 Papaver somniferum HOM05D000179 ORTHO05D000107 3.4e-33 146.4 341 41.1
MSTRG.21611 Avicennia marina HOM05D000179 ORTHO05D000107 1.1e-31 141.4 283 43.1
Thecc.05G310800 Theobroma cacao HOM05D000179 ORTHO05D000107 2.4e-31 140.2 293 43.7
Nitab4.5_0001447g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 1.6e-30 137.5 286 43.7
Duzib177G0852 Durio zibethinus HOM05D000179 ORTHO05D000107 1.1e-28 131.3 288 41.3
CSS0050321 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 1.9e-28 130.6 286 43.4
Solyc09g074780.3 Solanum lycopersicum HOM05D000179 ORTHO05D000107 1.9e-28 130.6 291 43.0
Sopen09g029630 Solanum pennellii HOM05D000179 ORTHO05D000107 1.9e-28 130.6 290 41.4
Dinv40306 Davidia involucrata HOM05D001646 ORTHO05D001572 2.5e-28 130.2 294 43.2
FAN24G0694 Fragaria x ananassa HOM05D000179 ORTHO05D000107 2.5e-28 130.2 308 40.6
PGSC0003DMG400011365 Solanum tuberosum HOM05D000179 ORTHO05D000107 4.3e-28 129.4 289 42.2
Duzib106G0864 Durio zibethinus HOM05D000179 ORTHO05D000107 7.3e-28 128.6 288 41.3
FAN20G0439 Fragaria x ananassa HOM05D000179 ORTHO05D000107 9.6e-28 128.3 308 40.6
Potri.005G027200 Populus trichocarpa HOM05D000179 ORTHO05D000107 9.6e-28 128.3 240 41.2
Lj5g0020678 Lotus japonicus HOM05D000179 ORTHO05D000107 1.2e-27 127.9 268 39.6
Sabra13G0021600 Salix brachista HOM05D000179 ORTHO05D000107 1.2e-27 127.9 284 38.7
FvH4_c6g00070 Fragaria vesca HOM05D000179 ORTHO05D000107 2.1e-27 127.1 308 40.3
ECA247G4084 Erigeron canadensis HOM05D000179 ORTHO05D000107 3.6e-27 126.3 285 41.1
Potri.013G019200 Populus trichocarpa HOM05D000179 ORTHO05D000107 4.7e-27 125.9 287 38.7
FAN15G0210 Fragaria x ananassa HOM05D000179 ORTHO05D000107 6.2e-27 125.6 307 40.1
FAN27G2968 Fragaria x ananassa HOM05D000179 ORTHO05D000107 1.4e-26 124.4 303 40.3
Hma1.2p1_0209F.1_g088820 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 5.2e-26 122.5 118 62.7
CiPaw.08G098700 Carya illinoinensis HOM05D000179 ORTHO05D000107 4.4e-25 119.4 162 54.3
Eucgr.H01190 Eucalyptus grandis HOM05D000179 ORTHO05D000107 1.3e-24 117.9 323 42.7
Sabra05G0032500 Salix brachista HOM05D000179 ORTHO05D000107 1.1e-23 114.8 287 38.0
CiPaw.08G163100 Carya illinoinensis HOM05D000179 ORTHO05D000107 1.2e-22 111.3 276 40.2
GSVIVG01031112001 Vitis vinifera HOM05D000179 ORTHO05D000107 1.6e-22 110.9 283 36.7
Manes.08G119600 Manihot esculenta HOM05D000179 ORTHO05D000107 4.6e-22 109.4 282 37.2
Peaxi162Scf00067g01614 Petunia axillaris HOM05D000179 ORTHO05D000107 6.6e-21 105.5 260 39.6
COL.COLO4_10490 Corchorus olitorius HOM05D000179 ORTHO05D000107 1.1e-20 104.8 277 40.4
CiPaw.07G019800 Carya illinoinensis HOM05D000179 ORTHO05D000107 1.5e-20 104.4 281 39.9
QL03p012801 Quercus lobata HOM05D000179 ORTHO05D000107 3.3e-20 103.2 275 38.9
Gohir.D11G276500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.6e-19 100.9 295 39.0
Gorai.007G298600 Gossypium raimondii HOM05D000179 ORTHO05D000107 2.1e-19 100.5 293 38.6
Manes.09G169000 Manihot esculenta HOM05D000179 ORTHO05D000107 1.4e-18 97.8 269 34.9
Migut.D00185 Erythranthe guttata HOM05D000179 ORTHO05D000107 4.5e-17 92.8 288 36.8
HanXRQChr10g0283921 Helianthus annuus HOM05D000179 ORTHO05D222937 1.9e-15 87.4 235 38.7
ATR0706G277 Amborella trichopoda HOM05D000179 ORTHO05D000107 2.7e-14 83.6 243 37.0
Cfa006610 Carpinus fangiana HOM05D000179 ORTHO05D000107 2.7e-14 83.6 284 38.7
PGR083G0435 Punica granatum HOM05D000179 ORTHO05D000107 6.7e-13 79.0 246 36.2
Haze_04165 Corylus avellana HOM05D000179 ORTHO05D000107 7.4e-12 75.5 284 34.5
Ciclev10000982m.g Citrus clementina HOM05D000179 ORTHO05D000107 3.7e-11 73.2 216 36.1
Phvul.006G090800 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 6.2e-11 72.4 255 34.9
Cc02_g31070 Coffea canephora HOM05D000179 ORTHO05D000107 1.1e-10 71.6 232 32.8
Nitab4.5_0002344g0140 Nicotiana tabacum HOM05D000179 ORTHO05D000107 1.8e-10 70.9 262 33.2
Nitab4.5_0008283g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 3.1e-10 70.1 241 34.4
SGA_v2.0_scaffold1G00387 Striga asiatica HOM05D000179 ORTHO05D000107 9.0e-10 68.6 261 33.3
MD12G1216800 Malus domestica HOM05D000179 ORTHO05D000107 1.7e-08 64.3 228 33.8
Cpa.g.sc48.75 Carica papaya HOM05D000179 ORTHO05D000107 2.2e-08 63.9 320 35.0
VMungo0540G0697 Vigna mungo HOM05D000179 ORTHO05D000107 2.2e-08 63.9 263 31.2
arahy.Tifrunner.gnm1.ann1.76HL2D Arachis hypogaea HOM05D000179 ORTHO05D000107 4.9e-08 62.8 249 32.5
Gohir.A11G266200 Gossypium hirsutum HOM05D000179 ORTHO05D000107 4.9e-08 62.8 291 31.3
MD04G1203000 Malus domestica HOM05D000179 ORTHO05D000107 4.2e-07 59.7 228 33.8
Glyma.20G235100 Glycine max HOM05D000179 ORTHO05D000107 7.1e-07 58.9 218 35.3
CDE08G1400 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 2.7e-06 57.0 285 32.3
Ca_10119_v3 Cicer arietinum L. HOM05D000179 ORTHO05D000107 3.5e-06 56.6 229 36.2


User provided reference genes

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