Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 0.0e+00 1780.0 898 100.0
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 0.0e+00 1777.7 898 99.9
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 7.5e-268 927.5 974 55.9
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 1.0e-203 714.5 775 54.3
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 2.4e-173 613.6 935 44.2
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 9.1e-173 611.7 941 43.8
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 5.2e-160 569.3 960 40.2
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 6.8e-160 568.9 975 41.1
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 2.3e-152 543.9 964 41.4
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.6e-140 504.6 911 40.6
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 1.0e-131 475.3 953 38.6
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 7.3e-130 469.2 532 55.3
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 3.6e-129 466.8 930 38.2
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 1.8e-128 464.5 940 38.3
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 7.1e-125 452.6 957 35.7
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 2.4e-120 437.6 1062 33.5
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 2.4e-120 437.6 962 36.7
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 2.0e-119 434.5 360 61.1
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 5.4e-117 426.4 972 35.9
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.0e-115 420.6 652 41.9
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 2.6e-111 407.5 955 35.9
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 2.8e-105 387.5 982 33.2
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 8.1e-105 386.0 966 35.2
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 4.5e-103 380.2 974 33.4
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 2.2e-102 377.9 882 37.0
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 6.7e-99 366.3 989 32.7
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 3.7e-97 360.5 952 32.5
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 6.2e-97 359.8 964 33.5
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 9.0e-96 355.9 920 32.4
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 1.4e-93 348.6 913 33.2
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 7.1e-93 346.3 934 32.3
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.1e-92 344.7 989 32.6
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 1.0e-91 342.4 936 32.7
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 1.0e-91 342.4 1107 30.3
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 1.0e-91 342.4 910 32.7
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 1.1e-90 339.0 913 32.9
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 6.3e-89 333.2 925 32.1
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 1.4e-88 332.0 801 33.3
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 1.2e-87 328.9 943 32.2
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 2.0e-87 328.2 986 31.4
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 5.9e-87 326.6 965 31.9
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 2.5e-85 321.2 980 30.7
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 2.3e-83 314.7 931 30.4
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 6.7e-83 313.2 946 30.1
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 1.5e-82 312.0 930 29.4
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 4.8e-81 307.0 681 35.5
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 1.1e-80 305.8 928 32.1
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 1.8e-80 305.1 900 29.2
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 4.1e-80 303.9 1251 27.5
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 1.3e-78 298.9 917 28.7
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 6.5e-78 296.6 1031 28.2
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 2.5e-77 294.7 903 31.5
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 4.2e-77 293.9 1026 27.4
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 5.5e-77 293.5 710 34.1
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 2.1e-76 291.6 900 31.6
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 3.6e-76 290.8 900 30.9
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 6.7e-75 286.6 942 27.9
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 8.8e-75 286.2 902 29.9
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 9.7e-74 282.7 928 30.6
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 2.2e-73 281.6 917 29.7
Actinidia27213 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.8e-72 278.5 313 53.4
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 2.4e-72 278.1 930 29.5
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 4.5e-71 273.9 917 28.4
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 6.5e-70 270.0 975 28.7
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 2.7e-68 264.6 918 29.1
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 1.4e-67 262.3 939 26.9
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 6.7e-67 260.0 938 27.9
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 4.4e-66 257.3 183 64.5
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 5.7e-66 256.9 950 28.0
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 2.8e-65 254.6 901 28.4
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 4.1e-64 250.8 916 28.2
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 1.2e-63 249.2 916 28.5
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 2.6e-63 248.1 1072 27.6
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 3.5e-63 247.7 956 27.2
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 7.7e-63 246.5 914 28.2
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 5.5e-61 240.4 964 26.3
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 7.2e-61 240.0 943 27.1
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 9.4e-61 239.6 924 27.9
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 8.0e-60 236.5 168 65.5
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 3.0e-59 234.6 1003 28.3
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 3.0e-59 234.6 1001 25.6
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 4.0e-59 234.2 1003 28.3
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.5e-58 232.3 360 38.6
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 2.6e-58 231.5 978 26.5
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 9.7e-58 229.6 922 28.1
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 4.1e-56 224.2 713 28.6
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 1.2e-55 222.6 928 26.8
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 1.0e-54 219.5 995 27.0
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 1.7e-54 218.8 992 27.6
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 1.7e-54 218.8 992 27.6
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 1.1e-53 216.1 261 44.4
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 4.0e-51 207.6 208 47.1
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 5.2e-51 207.2 1161 26.7
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 8.8e-51 206.5 949 26.9
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 9.8e-50 203.0 936 25.6
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 2.4e-48 198.4 917 26.5
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 7.7e-47 193.4 221 43.9
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 8.6e-46 189.9 988 26.3
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 2.5e-45 188.3 203 45.8
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 4.2e-45 187.6 462 29.7
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 4.0e-43 181.0 183 44.8
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 8.3e-41 173.3 735 26.1
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 8.6e-38 163.3 713 25.1
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.5e-37 162.5 537 31.5
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 2.1e-36 158.7 183 40.4
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 5.8e-34 150.6 257 42.0
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 8.3e-25 120.2 95 68.4
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 6.6e-22 110.5 97 66.0
Actinidia16149 Actinidia chinensis HOM05D057958 ORTHO05D005687 1.1e-21 109.8 134 50.0
Actinidia26534 Actinidia chinensis HOM05D057958 ORTHO05D005687 1.1e-21 109.8 134 50.0
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 9.9e-18 96.7 356 30.9
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 6.4e-17 94.0 124 39.5
TAR629G0168 Trochodendron aralioides HOM05D004942 ORTHO05D005687 2.4e-16 92.0 214 39.3
Oeu028721.1 Olea europaea HOM05D004942 ORTHO05D005687 2.3e-14 85.5 114 50.0
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 9.9e-10 70.1 159 38.4
Oeu028720.1 Olea europaea HOM05D004942 ORTHO05D005687 1.3e-09 69.7 247 28.3
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 3.5e-07 61.6 171 25.7
Aqoxy2G01048 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 2.3e-06 58.9 184 31.0


User provided reference genes

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