Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.4e-88 328.9 186 100.0
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 6.3e-36 154.8 219 50.2
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 1.6e-26 123.6 241 41.5
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 3.5e-26 122.5 205 40.0
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 5.9e-26 121.7 219 43.8
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 5.0e-25 118.6 254 36.6
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 8.6e-25 117.9 228 42.5
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 8.6e-25 117.9 240 41.7
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.1e-24 117.5 219 39.7
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 6.1e-23 111.7 205 38.0
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.0e-22 109.0 201 38.3
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 6.8e-22 108.2 249 39.0
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 2.0e-21 106.7 213 44.6
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.0e-21 106.7 200 39.0
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 2.2e-20 103.2 235 43.0
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 2.2e-20 103.2 233 42.5
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 3.7e-20 102.4 200 36.5
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 6.3e-20 101.7 202 38.1
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 6.3e-20 101.7 229 40.2
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 8.3e-20 101.3 208 45.2
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.8e-19 100.1 197 40.1
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.4e-19 99.8 169 52.7
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 3.1e-19 99.4 222 38.7
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 3.1e-19 99.4 151 47.7
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 9.2e-19 97.8 234 36.3
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 5.9e-18 95.1 222 34.2
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 5.9e-18 95.1 192 38.5
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 7.8e-18 94.7 221 34.8
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 2.9e-17 92.8 196 36.7
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 6.6e-17 91.7 203 37.9
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 4.3e-16 89.0 245 38.4
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 5.6e-16 88.6 216 35.6
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 7.3e-16 88.2 231 36.8
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 9.5e-16 87.8 231 32.9
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 9.5e-16 87.8 203 36.9
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 1.2e-15 87.4 202 36.1
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.2e-15 87.4 193 34.7
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 3.6e-15 85.9 211 36.0
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 4.7e-15 85.5 203 34.5
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 6.1e-15 85.1 197 35.0
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 1.4e-14 84.0 231 32.0
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 3.1e-14 82.8 211 33.2
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.0e-14 82.4 143 42.7
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 5.2e-14 82.0 188 37.8
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 5.2e-14 82.0 188 37.8
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 5.2e-14 82.0 214 31.8
Rhsim12G0023500 Rhododendron simsii HOM05D007269 ORTHO05D008531 6.8e-14 81.6 154 40.3
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 1.2e-13 80.9 221 29.0
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 2.0e-13 80.1 208 34.1
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 3.4e-13 79.3 238 34.0
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.4e-13 79.0 234 38.0
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.8e-13 78.6 218 35.3
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 7.5e-13 78.2 261 31.4
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.7e-12 77.0 206 37.4
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.7e-12 77.0 201 35.3
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.7e-12 77.0 195 34.4
CsaV3_6G008060 Cucumis sativus L. HOM05D026927 ORTHO05D008531 2.2e-12 76.6 194 42.3
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.9e-12 76.3 224 41.1
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 2.9e-12 76.3 230 30.0
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 3.7e-12 75.9 270 29.3
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 3.7e-12 75.9 217 34.1
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 4.9e-12 75.5 199 36.2
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 6.4e-12 75.1 206 33.0
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 8.3e-12 74.7 94 43.6
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 8.3e-12 74.7 195 33.8
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 8.3e-12 74.7 225 30.2
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 1.1e-11 74.3 210 31.9
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 1.4e-11 73.9 192 34.4
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 3.2e-11 72.8 216 34.3
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.2e-11 72.8 216 34.3
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 3.2e-11 72.8 238 36.1
CDE05G2305 Ceratophyllum demersum HOM05D007269 ORTHO05D008531 4.1e-11 72.4 188 39.4
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 4.1e-11 72.4 138 39.1
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 4.1e-11 72.4 208 37.5
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 7.0e-11 71.6 213 34.3
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 9.2e-11 71.2 216 33.3
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 1.2e-10 70.9 195 33.3
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 1.2e-10 70.9 199 29.1
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.6e-10 70.5 138 38.4
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 2.0e-10 70.1 91 46.2
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 2.7e-10 69.7 218 31.2
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 2.7e-10 69.7 208 38.5
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 3.5e-10 69.3 237 28.7
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.6e-10 68.9 210 33.8
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 4.6e-10 68.9 188 31.9
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 7.8e-10 68.2 205 30.7
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 1.7e-09 67.0 236 29.7
Sed0005097 Sechium edule HOM05D026927 ORTHO05D008531 2.3e-09 66.6 198 39.9
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 5.0e-09 65.5 202 32.7
Os01g0924200 Oryza sativa ssp. japonica HOM05D007269 ORTHO05D008531 6.6e-09 65.1 192 38.5
MELO3C022330.2 Cucumis melo HOM05D026927 ORTHO05D008531 2.5e-08 63.2 193 35.2
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 5.6e-08 62.0 199 29.6
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 5.6e-08 62.0 205 31.7
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 9.5e-08 61.2 205 29.8
Atru.chr11.2371 Acer truncatum HOM05D007269 ORTHO05D051934 2.1e-07 60.1 73 50.7
ClCG06G002000 Citrullus lanatus HOM05D026927 ORTHO05D008531 3.6e-07 59.3 131 38.2
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 1.4e-06 57.4 215 29.8
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 3.1e-06 56.2 214 29.0
Rhsim12G0176800 Rhododendron simsii HOM05D007269 ORTHO05D008531 3.1e-06 56.2 143 43.4


User provided reference genes

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