Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011586 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 2.2e-140 502.3 259 100.0
CSS0026465 Camellia sinensis var. sinensis HOM05D000539 ORTHO05D000233 1.2e-90 337.0 372 57.8
CSS0035381 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 6.4e-87 324.7 256 73.4
CSS0023486 Camellia sinensis var. sinensis HOM05D000616 ORTHO05D000233 1.2e-64 250.8 350 50.3
CSS0029876 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 2.7e-61 239.6 299 55.5
vmacro01527 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 2.4e-33 146.7 296 33.8
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.0e-31 141.4 249 36.9
Rhsim01G0018800 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.2e-30 135.2 313 32.3
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.7e-27 125.6 317 31.5
CSS0001617 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 9.7e-27 124.8 302 32.8
CSS0020232 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 9.7e-27 124.8 302 32.8
CSS0048093 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 1.4e-25 120.9 302 32.8
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-25 120.6 332 28.6
CSS0029756 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 4.1e-25 119.4 302 31.5
CSS0021524 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 1.0e-23 114.8 302 33.8
CSS0036460 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 2.9e-23 113.2 308 30.5
CSS0003667 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 1.6e-21 107.5 308 29.2
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-21 107.1 123 48.8
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.3e-20 103.6 98 56.1
vmacro13143 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 2.3e-20 103.6 345 25.8
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.7e-19 99.0 123 48.8
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.7e-19 99.0 123 48.8
CSS0027885 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 1.3e-18 97.8 286 30.1
CSS0041730 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 3.1e-17 93.2 290 29.3
Rhsim03G0043700 Rhododendron simsii HOM05D000539 ORTHO05D000592 6.3e-10 68.9 84 44.0
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.4e-09 67.0 79 45.6
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 2.4e-09 67.0 61 52.5
RcHm_v2.0_Chr2g0095181 Rosa chinensis HOM05D000539 ORTHO05D000233 9.2e-09 65.1 75 44.0
RcHm_v2.0_Chr5g0066151 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-08 64.7 61 49.2
Hma1.2p1_1437F.1_g283240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 2.7e-08 63.5 145 33.8
FAN22G0175 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.8e-08 62.0 68 44.1
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 7.8e-08 62.0 68 42.6
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 7.8e-08 62.0 65 44.6
Hma1.2p1_0043F.1_g025950 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.0e-07 61.6 234 26.1
Rhsim01G0080200 Rhododendron simsii HOM05D000539 ORTHO05D000592 1.3e-07 61.2 69 49.3
Prupe.6G193600 Prunus persica HOM05D000539 ORTHO05D000233 2.3e-07 60.5 239 27.2
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-07 60.5 63 46.0
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 5.0e-07 59.3 67 44.8
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 5.0e-07 59.3 62 46.8
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 6.6e-07 58.9 147 32.7
Rhsim05G0145300 Rhododendron simsii HOM05D000539 ORTHO05D000233 6.6e-07 58.9 66 43.9
Sed0019036 Sechium edule HOM05D000539 ORTHO05D000592 6.6e-07 58.9 74 45.9
FvH4_4g16176 Fragaria vesca HOM05D000539 ORTHO05D000233 8.6e-07 58.5 63 46.0
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-07 58.5 49 51.0
RcHm_v2.0_Chr5g0071741 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-07 58.5 62 46.8
FvH4_7g07223 Fragaria vesca HOM05D000539 ORTHO05D000592 1.5e-06 57.8 120 31.7
FAN11G1109 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-06 57.8 93 37.6
Rhsim08G0143200 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.5e-06 57.8 86 39.5
RcHm_v2.0_Chr1g0340611 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-06 57.8 55 49.1
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 2.5e-06 57.0 58 46.6
FAN01G1775 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.5e-06 57.0 93 36.6
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-06 57.0 56 46.4
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 2.5e-06 57.0 75 36.0
FAN04G3167 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.3e-06 56.6 93 35.5
FAN19G1975 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-06 56.6 43 48.8
RcHm_v2.0_Chr3g0460901 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-06 56.6 85 36.5
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 4.3e-06 56.2 61 45.9
Sed0007296 Sechium edule HOM05D000539 ORTHO05D000592 4.3e-06 56.2 86 40.7
FvH4_4g09212 Fragaria vesca HOM05D000539 ORTHO05D000233 5.6e-06 55.8 90 38.9
FvH4_5g31943 Fragaria vesca HOM05D000539 ORTHO05D000233 5.6e-06 55.8 90 38.9
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 5.6e-06 55.8 72 45.8
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.6e-06 55.8 67 41.8
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 5.6e-06 55.8 96 35.4
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 5.6e-06 55.8 52 48.1
RcHm_v2.0_Chr1g0352291 Rosa chinensis HOM05D000539 ORTHO05D000233 5.6e-06 55.8 85 35.3
RcHm_v2.0_Chr6g0286411 Rosa chinensis HOM05D000539 ORTHO05D000233 5.6e-06 55.8 55 49.1
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 5.6e-06 55.8 42 57.1
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 46.5
FvH4_3g14252 Fragaria vesca HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 46.5
FvH4_4g09773 Fragaria vesca HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 46.5
FvH4_6g12903 Fragaria vesca HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 46.5
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 53.5
FAN06G4635 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 53.5
FAN07G1063 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 53.5
FAN14G5321 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 93 36.6
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 53.5
FAN16G1455 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 53.5
FAN16G2445 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 53.5
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 53.5
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 53.5
FAN19G0618 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 53.5
FAN21G1576 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 54 44.4
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 53.5
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 53.5
FAN23G1524 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-06 55.5 76 34.2
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-06 55.5 43 53.5
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 53.5
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-06 55.5 43 53.5
RhsimUnG0147600 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.3e-06 55.5 52 50.0
CANSAT25G2736 Cannabis sativa HOM05D000539 ORTHO05D000233 9.5e-06 55.1 43 55.8
CANSAT35G1647 Cannabis sativa HOM05D000539 ORTHO05D000233 9.5e-06 55.1 43 55.8
FvH4_7g02152 Fragaria vesca HOM05D000539 ORTHO05D000233 9.5e-06 55.1 93 35.5
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.5e-06 55.1 43 53.5
FAN05G5337 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.5e-06 55.1 76 34.2
FAN06G1168 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.5e-06 55.1 83 38.6
FAN07G0889 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.5e-06 55.1 76 34.2
FAN09G4698 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.5e-06 55.1 76 34.2
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.5e-06 55.1 76 34.2
FAN28G0890 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.5e-06 55.1 76 34.2
Prupe.3G107500 Prunus persica HOM05D000539 ORTHO05D000233 9.5e-06 55.1 230 26.5
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 9.5e-06 55.1 61 41.0
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 9.5e-06 55.1 60 43.3
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 9.5e-06 55.1 61 41.0


User provided reference genes

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