Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011584 Camellia sinensis var. sinensis HOM05D007215 ORTHO05D009019 9.0e-74 280.4 168 100.0
QL10p055936 Quercus lobata HOM05D007215 ORTHO05D009019 9.7e-60 233.8 166 82.5
Lju470C16T0 Lonicera japonica HOM05D007215 ORTHO05D009019 4.1e-58 228.4 169 82.2
Dinv33208 Davidia involucrata HOM05D007215 ORTHO05D009019 6.5e-56 221.1 166 80.1
Peaxi162Scf00180g00003 Petunia axillaris HOM05D007215 ORTHO05D009019 1.4e-55 219.9 172 76.2
Lj6P222T10 Lonicera japonica HOM05D007215 ORTHO05D009019 7.2e-55 217.6 165 67.9
MSTRG.9732 Avicennia marina HOM05D007215 ORTHO05D009019 3.6e-54 215.3 172 73.3
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla HOM05D007215 ORTHO05D009019 2.3e-53 212.6 165 72.1
VMungo0251G1340 Vigna mungo HOM05D007215 ORTHO05D009019 3.0e-53 212.2 168 66.1
Gohir.A10G144100 Gossypium hirsutum HOM05D007215 ORTHO05D009019 8.8e-53 210.7 187 67.9
Glyma.02G137900 Glycine max HOM05D007215 ORTHO05D009019 1.1e-52 210.3 172 62.8
Gorai.011G135400 Gossypium raimondii HOM05D007215 ORTHO05D009019 2.0e-52 209.5 187 67.9
DCAR_027521 Daucus carota HOM05D007215 ORTHO05D009019 9.7e-52 207.2 169 66.9
Phvul.003G297000 Phaseolus vulgaris HOM05D007215 ORTHO05D009019 1.3e-51 206.8 167 64.1
Cfa015271 Carpinus fangiana HOM05D007215 ORTHO05D009019 2.2e-51 206.1 169 67.5
Glyma.07G207400 Glycine max HOM05D007215 ORTHO05D009019 2.2e-51 206.1 170 62.4
Potri.019G112300 Populus trichocarpa HOM05D007215 ORTHO05D009019 4.8e-51 204.9 163 74.2
EL10Ac3g06096 Beta vulgaris HOM05D007215 ORTHO05D009019 1.1e-50 203.8 176 65.3
Sc25g0002820 Simmondsia chinensis HOM05D007215 ORTHO05D009019 1.1e-50 203.8 171 67.8
Ah.07g202820 Amaranthus hybridus HOM05D007215 ORTHO05D009019 2.0e-49 199.5 177 62.7
Cc03_g14170 Coffea canephora HOM05D007215 ORTHO05D009019 2.6e-49 199.1 170 64.1
Haze_01356 Corylus avellana HOM05D007215 ORTHO05D009019 3.4e-49 198.7 129 77.5
SGA_v2.0_scaffold12G06193 Striga asiatica HOM05D007215 ORTHO05D009019 1.7e-48 196.4 179 64.8
Manes.11G128800 Manihot esculenta HOM05D007215 ORTHO05D009019 3.8e-48 195.3 169 74.0
Duzib151G0080 Durio zibethinus HOM05D007215 ORTHO05D009019 8.5e-48 194.1 184 64.7
MSTRG.4303 Avicennia marina HOM05D007215 ORTHO05D009019 1.1e-47 193.7 171 72.5
Oeu015716.1 Olea europaea HOM05D007215 ORTHO05D009019 3.2e-47 192.2 168 64.3
Psat7g121080 Pisum sativum HOM05D007215 ORTHO05D009019 3.2e-47 192.2 173 60.7
Sabra19G0108300 Salix brachista HOM05D007215 ORTHO05D009019 3.2e-47 192.2 163 73.0
Lalb_Chr05g0218881 Lupinus albus HOM05D007215 ORTHO05D009019 5.5e-47 191.4 171 68.4
FAN17G2642 Fragaria x ananassa HOM05D007215 ORTHO05D009019 9.4e-47 190.7 185 60.5
RcHm_v2.0_Chr4g0405921 Rosa chinensis HOM05D007215 ORTHO05D009019 1.6e-46 189.9 168 64.9
ClCG06G001110 Citrullus lanatus HOM05D007215 ORTHO05D009019 2.1e-46 189.5 176 67.6
Lalb_Chr09g0328091 Lupinus albus HOM05D007215 ORTHO05D009019 2.1e-46 189.5 172 69.8
Oeu016616.1 Olea europaea HOM05D007215 ORTHO05D009019 2.1e-46 189.5 169 62.1
Oeu016617.1 Olea europaea HOM05D007215 ORTHO05D009019 2.1e-46 189.5 169 62.1
Peaxi162Scf00483g00061 Petunia axillaris HOM05D007215 ORTHO05D009019 2.7e-46 189.1 176 61.9
FvH4_4g10370 Fragaria vesca HOM05D007215 ORTHO05D009019 6.1e-46 188.0 173 63.6
Medtr4g087380 Medicago truncatula HOM05D007215 ORTHO05D009019 1.8e-45 186.4 173 67.1
Sed0003072 Sechium edule HOM05D007215 ORTHO05D009019 2.3e-45 186.0 181 60.2
FAN22G1962 Fragaria x ananassa HOM05D007215 ORTHO05D009019 5.1e-45 184.9 183 60.1
Duzib268G1282 Durio zibethinus HOM05D007215 ORTHO05D009019 6.7e-45 184.5 183 63.9
Atru.chr4.1429 Acer truncatum HOM05D007215 ORTHO05D009019 8.8e-45 184.1 139 73.4
Cpa.g.sc9.370 Carica papaya HOM05D007215 ORTHO05D009019 8.8e-45 184.1 131 77.1
Aqoxy2G03930 Aquilegia oxysepala HOM05D007215 ORTHO05D009019 2.6e-44 182.6 168 56.5
COL.COLO4_00135 Corchorus olitorius HOM05D007215 ORTHO05D009019 2.6e-44 182.6 183 63.9
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 1.7e-43 179.9 179 64.8
Rhsim09G0009600 Rhododendron simsii HOM05D007215 ORTHO05D009019 2.8e-43 179.1 173 67.6
TAR362G0943 Trochodendron aralioides HOM05D007215 ORTHO05D009019 3.7e-43 178.7 168 60.1
AUR62002398 Chenopodium quinoa HOM05D007215 ORTHO05D009019 4.8e-43 178.3 172 60.5
AUR62023787 Chenopodium quinoa HOM05D007215 ORTHO05D009019 4.8e-43 178.3 172 60.5
HanXRQChr04g0110541 Helianthus annuus HOM05D007215 ORTHO05D009019 8.2e-43 177.6 160 61.9
Prupe.1G207500 Prunus persica HOM05D007215 ORTHO05D009019 8.2e-43 177.6 175 64.6
THA.LOC104804037 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 2.4e-42 176.0 170 61.2
CiPaw.02G100200 Carya illinoinensis HOM05D007215 ORTHO05D009019 9.1e-42 174.1 190 58.9
MD04G1049300 Malus domestica HOM05D007215 ORTHO05D009019 6.5e-40 167.9 139 68.3
TAR633G2258 Trochodendron aralioides HOM05D007215 ORTHO05D009019 1.5e-39 166.8 168 56.5
TAR633G0862 Trochodendron aralioides HOM05D007215 ORTHO05D009019 5.5e-39 164.9 168 56.0
Thecc.04G165300 Theobroma cacao HOM05D007215 ORTHO05D009019 9.4e-39 164.1 184 60.3
BraA09t40633Z Brassica rapa HOM05D007215 ORTHO05D009019 3.6e-38 162.2 171 57.9
BcaC07g40499 Brassica carinata HOM05D007215 ORTHO05D009019 8.0e-38 161.0 172 58.1
C08p34680 Brassica napus HOM05D007215 ORTHO05D009019 8.0e-38 161.0 172 58.1
BolC8t51070H Brassica oleracea HOM05D007215 ORTHO05D009019 8.0e-38 161.0 172 58.1
Thhalv10006255m.g Eutrema salsugineum HOM05D007215 ORTHO05D009019 4.0e-37 158.7 168 57.1
CAN.G136.10 Capsicum annuum HOM05D007215 ORTHO05D009019 6.7e-37 157.9 173 55.5
HPP92_023723 Vanilla planifolia HOM05D007215 ORTHO05D009019 8.8e-37 157.5 127 67.7
A09p52000 Brassica napus HOM05D007215 ORTHO05D009019 2.6e-36 156.0 172 57.0
Solyc06g053440.3 Solanum lycopersicum HOM05D007215 ORTHO05D009019 2.6e-36 156.0 175 53.7
Sopen06g018520 Solanum pennellii HOM05D007215 ORTHO05D009019 2.6e-36 156.0 174 54.0
PGSC0003DMG402016333 Solanum tuberosum HOM05D007215 ORTHO05D009019 2.6e-36 156.0 176 54.5
ATR0743G235 Amborella trichopoda HOM05D007215 ORTHO05D009019 2.2e-35 152.9 133 62.4
AL5G41750 Arabidopsis lyrata HOM05D007215 ORTHO05D009019 6.3e-35 151.4 170 54.1
AT3G59680 Arabidopsis thaliana HOM05D007215 ORTHO05D009019 1.4e-34 150.2 170 54.1
Oeu021574.1 Olea europaea HOM05D007215 ORTHO05D009019 1.4e-34 150.2 171 52.0
Nn7g37543 Nelumbo nucifera HOM05D007215 ORTHO05D009019 3.1e-34 149.1 171 55.0
ECA238G1604 Erigeron canadensis HOM05D007215 ORTHO05D009019 4.1e-34 148.7 175 60.0
Migut.G01175 Erythranthe guttata HOM05D007215 ORTHO05D009019 9.1e-34 147.5 186 53.2
TWI38G1882 Tripterygium wilfordii HOM05D007215 ORTHO05D009019 3.5e-33 145.6 183 53.6
CiPaw.01G170200 Carya illinoinensis HOM05D007215 ORTHO05D009019 5.9e-33 144.8 188 60.6
Lj4g0027849 Lotus japonicus HOM05D007215 ORTHO05D009019 7.7e-33 144.4 174 51.7
Aa31LG10G13970 Aethionema arabicum HOM05D007215 ORTHO05D009019 1.0e-32 144.1 169 57.4
Eucgr.L00006 Eucalyptus grandis HOM05D007215 ORTHO05D009019 1.3e-32 143.7 175 50.9
Carub.0005s2640 Capsella rubella HOM05D007215 ORTHO05D009019 5.0e-32 141.7 168 54.8
HanXRQChr10g0285991 Helianthus annuus HOM05D007215 ORTHO05D009019 8.5e-32 141.0 172 51.7
Nn1g09545 Nelumbo nucifera HOM05D007215 ORTHO05D009019 1.1e-31 140.6 168 50.6
Lsat_1_v5_gn_5_190641 Lactuca sativa HOM05D007215 ORTHO05D009019 1.5e-31 140.2 175 56.6
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea HOM05D007215 ORTHO05D009019 1.9e-31 139.8 174 50.6
MBI11_g16037_MAGBIO Magnolia biondii HOM05D007215 ORTHO05D009019 4.2e-31 138.7 170 49.4
CDE09G0824 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 7.2e-31 137.9 166 50.6
Lj6P211T14 Lonicera japonica HOM05D007215 ORTHO05D009019 1.6e-30 136.7 124 58.1
CARHR170050 Cardamine hirsuta HOM05D007215 ORTHO05D009019 1.0e-29 134.0 169 52.1
Ciclev10022275m.g Citrus clementina HOM05D007215 ORTHO05D009019 1.8e-29 133.3 183 50.3
SalBow6G6024 Salvia bowleyana HOM05D007215 ORTHO05D009019 5.2e-29 131.7 172 49.4
CDE02G0746 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 1.3e-27 127.1 162 50.0
GSVIVG01038146001 Vitis vinifera HOM05D007215 ORTHO05D009019 8.3e-27 124.4 110 66.4
THA.LOC104816280 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 2.7e-25 119.4 172 46.5
CANSAT56G1068 Cannabis sativa HOM05D007215 ORTHO05D009019 2.2e-24 116.3 190 54.7
PSO017G6467 Papaver somniferum HOM05D007215 ORTHO05D009019 1.5e-23 113.6 151 49.7
MD17G1178000 Malus domestica HOM05D007215 ORTHO05D009019 1.6e-22 110.2 109 59.6
MELO3C022424.2 Cucumis melo HOM05D007215 ORTHO05D009019 2.7e-22 109.4 185 47.0
PGR042G0468 Punica granatum HOM05D007215 ORTHO05D009019 4.7e-22 108.6 190 46.3
Sp5g03500 Schrenkiella parvula HOM05D007215 ORTHO05D009019 6.1e-22 108.2 169 44.4
Migut.I00402 Erythranthe guttata HOM05D007215 ORTHO05D009019 1.4e-21 107.1 110 65.5
HPP92_007596 Vanilla planifolia HOM05D007215 ORTHO05D009019 1.8e-21 106.7 130 52.3
CsaV3_6G007050 Cucumis sativus L. HOM05D007215 ORTHO05D009019 2.0e-20 103.2 187 46.5
Os01g0393300 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 2.8e-19 99.4 152 46.7
PSO837G0056 Papaver somniferum HOM05D007215 ORTHO05D009019 6.3e-19 98.2 149 47.7
Gohir.D10G122900 Gossypium hirsutum HOM05D007215 ORTHO05D009019 4.4e-12 75.5 95 55.8
Os04g0495900 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 4.1e-10 68.9 152 38.2
Zm00001eb078580 Zea mays HOM05D007215 ORTHO05D009019 5.9e-09 65.1 152 38.2


User provided reference genes

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