Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011568 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D113572 4.6e-76 287.7 136 100.0
CSS0009746 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D003650 3.9e-11 72.0 76 53.9
CSS0044013 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D003650 1.1e-10 70.5 76 52.6
Lj5C262T14 Lonicera japonica HOM05D001824 ORTHO05D003650 2.4e-08 62.8 106 36.8
Dinv19401 Davidia involucrata HOM05D001824 ORTHO05D003650 3.1e-08 62.4 76 44.7
Oeu064614.1 Olea europaea HOM05D001824 ORTHO05D003650 3.1e-08 62.4 76 46.1
Sabra01G0169000 Salix brachista HOM05D001824 ORTHO05D003650 3.1e-08 62.4 77 41.6
THA.LOC104800038 Tarenaya hassleriana HOM05D001824 ORTHO05D003650 4.1e-08 62.0 76 46.1
GSVIVG01023264001 Vitis vinifera HOM05D001824 ORTHO05D003650 5.3e-08 61.6 106 36.8
Actinidia00182 Actinidia chinensis HOM05D001824 ORTHO05D003650 7.0e-08 61.2 106 37.7
Actinidia39009 Actinidia chinensis HOM05D001824 ORTHO05D003650 7.0e-08 61.2 106 37.7
CAN.G798.56 Capsicum annuum HOM05D001824 ORTHO05D003650 1.5e-07 60.1 76 46.1
Peaxi162Scf00011g00097 Petunia axillaris HOM05D001824 ORTHO05D003650 1.5e-07 60.1 108 38.0
Cc02_g23040 Coffea canephora HOM05D001824 ORTHO05D003650 2.0e-07 59.7 106 36.8
Solyc01g103670.4 Solanum lycopersicum HOM05D001824 ORTHO05D003650 2.6e-07 59.3 108 37.0
Sopen01g046080 Solanum pennellii HOM05D001824 ORTHO05D003650 2.6e-07 59.3 108 37.0
Aa31LG3G6730 Aethionema arabicum HOM05D001824 ORTHO05D003650 3.4e-07 58.9 76 40.8
CAN.G798.57 Capsicum annuum HOM05D001824 ORTHO05D003650 5.9e-07 58.2 76 43.4
Rhsim11G0124200 Rhododendron simsii HOM05D001824 ORTHO05D003650 5.9e-07 58.2 76 44.7
Atru.chr6.784 Acer truncatum HOM05D001824 ORTHO05D003650 7.7e-07 57.8 75 41.3
Atru.chr6.813 Acer truncatum HOM05D001824 ORTHO05D003650 7.7e-07 57.8 75 41.3
Gohir.D12G043000 Gossypium hirsutum HOM05D001824 ORTHO05D003650 7.7e-07 57.8 76 40.8
Gorai.008G045200 Gossypium raimondii HOM05D001824 ORTHO05D003650 7.7e-07 57.8 76 40.8
Gohir.A01G183000 Gossypium hirsutum HOM05D001824 ORTHO05D003650 1.0e-06 57.4 76 40.8
Gohir.D01G174100 Gossypium hirsutum HOM05D001824 ORTHO05D003650 1.0e-06 57.4 76 40.8
Gorai.002G216200 Gossypium raimondii HOM05D001824 ORTHO05D003650 1.0e-06 57.4 76 40.8
Nn5g27813 Nelumbo nucifera HOM05D001824 ORTHO05D003650 1.3e-06 57.0 106 34.9
BcaB08g35374 Brassica carinata HOM05D001824 ORTHO05D003650 3.8e-06 55.5 76 38.2
Thhalv10013194m.g Eutrema salsugineum HOM05D001824 ORTHO05D003650 3.8e-06 55.5 76 38.2
AL8G23910 Arabidopsis lyrata HOM05D001824 ORTHO05D003650 5.0e-06 55.1 76 38.2
BcaC04g20841 Brassica carinata HOM05D001824 ORTHO05D003650 5.0e-06 55.1 76 36.8
A10p08620 Brassica napus HOM05D001824 ORTHO05D003650 5.0e-06 55.1 76 36.8
C09p38570 Brassica napus HOM05D001824 ORTHO05D003650 5.0e-06 55.1 76 36.8
BolC9t56714H Brassica oleracea HOM05D001824 ORTHO05D003650 5.0e-06 55.1 76 36.8
BraSC37t46144Z Brassica rapa HOM05D001824 ORTHO05D003650 5.0e-06 55.1 76 36.8
Carub.0008s0984 Capsella rubella HOM05D001824 ORTHO05D003650 5.0e-06 55.1 76 38.2
Sp6g11600 Schrenkiella parvula HOM05D001824 ORTHO05D003650 5.0e-06 55.1 76 36.8
AT5G49950 Arabidopsis thaliana HOM05D001824 ORTHO05D003650 6.5e-06 54.7 76 38.2
CSS0010828 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D003650 8.5e-06 54.3 76 40.8
COL.COLO4_35563 Corchorus olitorius HOM05D001824 ORTHO05D003650 8.5e-06 54.3 107 39.3


User provided reference genes

Program Settings