Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011551 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 7.4e-67 256.9 116 100.0
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 1.2e-48 196.4 103 84.5
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 2.5e-46 188.7 95 86.3
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 1.1e-43 179.9 95 82.1
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 1.5e-43 179.5 95 82.1
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 1.3e-42 176.4 95 80.0
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 1.7e-42 176.0 95 80.0
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 3.7e-42 174.9 95 76.8
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 3.7e-42 174.9 95 78.9
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 1.1e-41 173.3 95 81.1
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 2.4e-41 172.2 104 74.0
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 6.9e-41 170.6 104 73.1
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 9.1e-41 170.2 95 75.8
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 9.1e-41 170.2 95 78.9
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 9.1e-41 170.2 95 78.9
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 1.2e-40 169.9 95 76.8
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 1.2e-40 169.9 95 76.8
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 1.5e-40 169.5 95 80.0
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 2.0e-40 169.1 95 77.9
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 2.6e-40 168.7 95 75.8
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 2.6e-40 168.7 95 76.8
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 2.6e-40 168.7 95 74.7
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 3.4e-40 168.3 95 74.7
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 3.4e-40 168.3 104 71.2
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 4.5e-40 167.9 96 76.0
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 4.5e-40 167.9 95 77.9
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 7.7e-40 167.2 95 76.8
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 7.7e-40 167.2 95 77.9
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 1.0e-39 166.8 95 75.8
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 1.0e-39 166.8 95 76.8
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 1.7e-39 166.0 95 77.9
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 2.2e-39 165.6 94 74.5
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 2.9e-39 165.2 104 70.2
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 2.9e-39 165.2 95 74.7
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 3.8e-39 164.9 95 72.6
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 8.5e-39 163.7 104 71.2
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 8.5e-39 163.7 95 70.5
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 1.1e-38 163.3 95 73.7
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.4e-38 162.9 95 75.8
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.4e-38 162.9 95 74.7
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 2.5e-38 162.2 95 76.8
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 7.2e-38 160.6 105 68.6
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 9.4e-38 160.2 95 72.6
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 1.6e-37 159.5 95 72.6
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 2.7e-37 158.7 95 70.5
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 2.7e-37 158.7 95 72.6
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 2.7e-37 158.7 95 72.6
FAN04G2384 Fragaria x ananassa HOM05D007638 ORTHO05D009805 4.7e-37 157.9 104 69.2
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 7.9e-37 157.1 95 70.5
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 1.4e-36 156.4 95 71.6
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 1.8e-36 156.0 95 70.5
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 2.3e-36 155.6 95 70.5
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 3.0e-36 155.2 95 72.6
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 5.1e-36 154.5 95 70.5
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 8.8e-36 153.7 95 71.6
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 2.0e-35 152.5 104 65.4
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 3.3e-35 151.8 95 68.4
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 1.3e-34 149.8 95 70.5
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 8.2e-34 147.1 93 69.9
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 2.6e-32 142.1 104 58.7
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 3.5e-32 141.7 95 64.2
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 1.7e-31 139.4 96 62.5
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 1.1e-30 136.7 95 60.0
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 4.4e-27 124.8 59 86.4
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 5.7e-27 124.4 95 58.9
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.8e-26 122.1 58 87.9
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.8e-26 122.1 58 87.9
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 4.1e-25 118.2 58 82.8
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 4.5e-24 114.8 96 51.0
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 3.8e-23 111.7 86 59.3
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 5.0e-23 111.3 58 74.1
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 9.4e-22 107.1 95 50.5
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 1.2e-21 106.7 86 57.0
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 2.8e-18 95.5 97 39.2
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 8.5e-15 84.0 38 89.5
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 6.1e-13 77.8 36 88.9
Haze_07890 Corylus avellana HOM05D007638 ORTHO05D009805 3.0e-12 75.5 36 83.3


User provided reference genes

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