Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 8.6e-51 203.4 103 100.0
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.3e-27 126.3 113 61.1
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 5.1e-27 124.4 113 59.3
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 8.6e-27 123.6 113 61.1
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.5e-26 122.9 109 62.4
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 3.3e-26 121.7 113 60.2
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 7.3e-26 120.6 111 58.6
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 3.6e-25 118.2 112 58.0
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 3.6e-25 118.2 111 56.8
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.1e-24 116.7 111 60.4
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.8e-24 115.9 110 56.4
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.5e-23 112.8 111 55.0
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 1.5e-23 112.8 111 55.9
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 2.0e-23 112.5 109 57.8
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 2.6e-23 112.1 110 58.2
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.4e-23 111.3 111 55.0
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 7.6e-23 110.5 113 54.0
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 7.6e-23 110.5 113 54.0
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 7.6e-23 110.5 111 54.1
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 7.6e-23 110.5 112 53.6
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 7.6e-23 110.5 111 52.3
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 9.9e-23 110.2 111 53.2
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 9.9e-23 110.2 110 57.3
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 9.9e-23 110.2 111 52.3
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.3e-22 109.8 111 54.1
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.3e-22 109.8 108 53.7
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 1.3e-22 109.8 108 53.7
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.7e-22 109.4 110 55.5
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.7e-22 109.4 113 53.1
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.7e-22 109.4 110 53.6
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 2.2e-22 109.0 110 54.5
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.8e-22 108.2 113 53.1
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 3.8e-22 108.2 110 55.5
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 4.9e-22 107.8 110 55.5
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 4.9e-22 107.8 110 55.5
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 6.4e-22 107.5 111 53.2
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 6.4e-22 107.5 112 56.2
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 6.4e-22 107.5 113 52.2
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 6.4e-22 107.5 113 52.2
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 8.4e-22 107.1 112 53.6
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 8.4e-22 107.1 111 50.5
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.1e-21 106.7 113 50.4
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.4e-21 106.3 113 49.6
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 1.4e-21 106.3 111 51.4
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 2.4e-21 105.5 113 54.0
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.4e-21 105.5 107 52.3
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 5.4e-21 104.4 109 50.5
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 7.1e-21 104.0 109 52.3
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 7.1e-21 104.0 110 51.8
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 7.1e-21 104.0 110 54.5
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 7.1e-21 104.0 112 50.9
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.2e-20 103.2 107 53.3
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.2e-20 103.2 110 52.7
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.6e-20 102.8 112 48.2
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.6e-20 102.8 111 53.2
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 2.1e-20 102.4 95 61.1
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 2.1e-20 102.4 108 51.9
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 2.1e-20 102.4 112 51.8
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 3.5e-20 101.7 109 50.5
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 4.6e-20 101.3 109 51.4
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 4.6e-20 101.3 107 52.3
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 4.6e-20 101.3 107 52.3
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 4.6e-20 101.3 109 53.2
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 6.0e-20 100.9 112 49.1
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 6.0e-20 100.9 113 50.4
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 7.8e-20 100.5 110 54.5
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.3e-19 99.8 110 52.7
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.7e-19 99.4 110 50.9
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 2.3e-19 99.0 110 50.9
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 3.9e-19 98.2 109 50.5
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 3.9e-19 98.2 110 54.5
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 3.9e-19 98.2 111 51.4
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 6.6e-19 97.4 111 50.5
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 8.7e-19 97.1 109 50.5
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 8.7e-19 97.1 110 50.0
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 1.1e-18 96.7 107 48.6
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 1.1e-18 96.7 109 49.5
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 1.9e-18 95.9 110 51.8
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 2.5e-18 95.5 109 49.5
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 2.5e-18 95.5 109 49.5
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 2.5e-18 95.5 109 49.5
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 2.5e-18 95.5 109 50.5
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 3.3e-18 95.1 108 47.2
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 4.3e-18 94.7 113 44.2
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 5.6e-18 94.4 110 48.2
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 5.6e-18 94.4 104 50.0
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 5.6e-18 94.4 109 49.5
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.3e-17 93.2 109 45.0
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 2.8e-17 92.0 109 48.6
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 2.8e-17 92.0 109 48.6
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 2.8e-17 92.0 109 47.7
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 3.6e-17 91.7 109 48.6
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 6.2e-17 90.9 109 48.6
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 6.2e-17 90.9 109 47.7
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-16 90.1 109 47.7
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.1e-16 90.1 109 47.7
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 2.4e-16 89.0 109 46.8
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 4.0e-16 88.2 109 46.8
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.3e-16 87.8 70 60.0
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 9.0e-16 87.0 55 74.5
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.2e-15 86.7 111 43.2
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.5e-15 86.3 100 50.0
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 2.0e-15 85.9 109 45.9
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 4.4e-15 84.7 109 41.3
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 4.4e-15 84.7 92 46.7
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.7e-14 82.8 66 57.6
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 6.4e-14 80.9 101 43.6
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.2e-13 78.6 59 57.6
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.2e-12 76.6 93 48.4
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.2e-12 76.6 93 48.4
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 5.1e-11 71.2 108 42.6
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.3e-09 66.6 104 38.5
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 2.1e-09 65.9 110 38.2
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 2.1e-09 65.9 109 34.9


User provided reference genes

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