Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 9.1e-170 600.1 299 100.0
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 1.1e-125 453.8 299 79.6
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.7e-120 436.4 293 77.8
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 3.3e-95 352.4 290 64.8
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 8.2e-94 347.8 290 64.5
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 1.0e-80 304.3 296 55.4
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.0e-80 304.3 286 57.3
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 1.8e-80 303.5 285 57.9
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 3.3e-79 299.3 286 56.6
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 9.7e-79 297.7 295 55.9
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 9.7e-79 297.7 279 58.8
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 2.2e-78 296.6 296 55.4
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 2.8e-78 296.2 278 58.6
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 3.7e-78 295.8 294 55.1
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 4.1e-77 292.4 302 55.3
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 5.3e-77 292.0 292 55.8
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 5.3e-77 292.0 302 55.3
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 9.1e-77 291.2 295 55.6
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.5e-76 290.4 279 56.6
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 2.0e-76 290.0 296 54.4
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 1.3e-75 287.3 286 55.2
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 2.9e-75 286.2 281 54.4
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 9.4e-74 281.2 285 55.1
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 2.7e-73 279.6 296 54.7
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 1.4e-72 277.3 297 52.9
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 6.7e-72 275.0 286 51.4
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 2.2e-70 270.0 295 51.2
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 8.2e-70 268.1 295 52.9
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.1e-66 257.7 304 51.0
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 5.5e-66 255.4 293 47.1
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 9.4e-66 254.6 304 50.7
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.2e-65 254.2 304 50.7
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 4.7e-65 252.3 294 51.4
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 7.5e-63 245.0 287 47.7
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 1.7e-62 243.8 296 47.6
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 2.8e-62 243.0 286 47.6
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 1.1e-61 241.1 285 50.9
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 1.4e-61 240.7 287 51.2
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 1.8e-61 240.4 286 46.9
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 5.3e-61 238.8 286 47.9
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 1.6e-60 237.3 282 48.2
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 5.9e-60 235.3 286 46.5
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 1.0e-59 234.6 285 45.6
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 1.1e-58 231.1 263 49.4
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 1.5e-58 230.7 297 47.1
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 1.5e-58 230.7 297 47.1
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 1.5e-58 230.7 284 47.2
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 2.5e-58 229.9 296 42.9
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 3.2e-58 229.6 292 49.7
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 3.2e-58 229.6 292 48.3
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 7.2e-58 228.4 284 47.2
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 7.2e-58 228.4 297 44.4
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 9.4e-58 228.0 297 45.8
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 1.6e-57 227.3 293 48.8
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 1.6e-57 227.3 287 49.8
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 1.6e-57 227.3 284 46.8
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 3.6e-57 226.1 279 47.0
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 4.7e-57 225.7 280 50.0
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 8.0e-57 224.9 297 43.1
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 8.0e-57 224.9 297 43.8
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 1.0e-56 224.6 187 63.1
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 1.8e-56 223.8 287 47.7
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.0e-56 222.6 287 47.7
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 4.0e-56 222.6 296 46.3
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 4.0e-56 222.6 299 45.2
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 8.8e-56 221.5 286 46.2
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 3.4e-55 219.5 295 44.7
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 7.5e-55 218.4 303 46.9
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 9.8e-55 218.0 287 47.0
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 1.3e-54 217.6 278 47.1
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 1.7e-54 217.2 286 46.2
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 2.2e-54 216.9 286 44.1
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 4.8e-54 215.7 295 43.4
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 8.3e-54 214.9 285 44.2
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 8.3e-54 214.9 279 44.4
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.1e-53 214.5 296 44.3
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 2.4e-53 213.4 279 44.4
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 4.1e-53 212.6 286 42.7
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 5.4e-53 212.2 292 43.8
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 2.0e-52 210.3 292 43.5
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 1.7e-51 207.2 297 41.1
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 1.7e-51 207.2 297 42.4
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 2.9e-51 206.5 290 44.5
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 2.9e-51 206.5 290 44.5
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 2.9e-51 206.5 292 42.8
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 3.8e-51 206.1 298 41.9
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 1.1e-50 204.5 298 43.3
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 2.5e-50 203.4 235 48.9
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 1.2e-49 201.1 286 42.7
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 3.6e-49 199.5 295 43.1
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 4.7e-49 199.1 295 43.1
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 1.0e-48 198.0 269 44.2
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 1.8e-48 197.2 287 44.3
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 4.0e-48 196.1 295 42.4
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 7.5e-47 191.8 294 43.2
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 5.6e-42 175.6 294 42.5
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 7.5e-39 165.2 224 47.3
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 2.0e-36 157.1 289 38.1
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 1.7e-35 154.1 284 37.3
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 3.2e-29 133.3 283 33.2
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 3.2e-29 133.3 191 46.6
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 1.6e-28 131.0 295 33.6
Zm00001eb184290 Zea mays HOM05D006730 ORTHO05D008189 1.7e-27 127.5 275 34.2
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 2.1e-25 120.6 272 31.2
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 5.4e-21 105.9 275 31.3
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 2.7e-20 103.6 211 31.8
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 1.4e-16 91.3 277 30.3
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 1.7e-14 84.3 124 41.9
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 5.1e-11 72.8 301 24.6
Ah.10g027090 Amaranthus hybridus HOM05D006730 ORTHO05D008189 8.7e-11 72.0 140 32.9


User provided reference genes

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