Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.6e-55 218.0 110 100.0
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.0e-54 214.9 110 99.1
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 3.4e-21 105.1 93 64.5
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 3.4e-21 105.1 104 61.5
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 3.4e-21 105.1 108 60.2
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 1.7e-20 102.8 106 60.4
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 4.9e-20 101.3 95 62.1
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 6.4e-20 100.9 92 64.1
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.1e-19 100.1 86 62.8
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 1.1e-19 100.1 112 57.1
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 5.4e-19 97.8 103 57.3
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 4.6e-18 94.7 103 51.5
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 2.3e-17 92.4 107 53.3
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 2.3e-17 92.4 101 52.5
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 3.0e-17 92.0 91 54.9
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 3.9e-17 91.7 96 57.3
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 8.7e-17 90.5 64 70.3
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 8.7e-17 90.5 64 70.3
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 1.9e-16 89.4 71 70.4
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 2.5e-16 89.0 91 58.2
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 2.5e-16 89.0 103 55.3
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 3.3e-16 88.6 104 52.9
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 9.6e-16 87.0 103 46.6
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 4.7e-15 84.7 58 70.7
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 4.7e-15 84.7 112 46.4
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.7e-15 84.7 103 53.4
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 6.2e-15 84.3 103 46.6
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 6.2e-15 84.3 65 64.6
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 6.2e-15 84.3 79 60.8
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 8.1e-15 84.0 83 57.8
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 8.1e-15 84.0 103 44.7
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 8.1e-15 84.0 95 53.7
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 8.1e-15 84.0 91 59.3
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 8.1e-15 84.0 108 51.9
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 1.1e-14 83.6 90 52.2
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 1.1e-14 83.6 103 51.5
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.4e-14 83.2 63 65.1
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.4e-14 83.2 63 65.1
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 1.8e-14 82.8 91 51.6
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 3.1e-14 82.0 106 47.2
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 3.1e-14 82.0 103 53.4
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 4.0e-14 81.6 107 48.6
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 4.0e-14 81.6 87 54.0
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.2e-14 81.3 95 49.5
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 6.9e-14 80.9 91 46.2
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 9.0e-14 80.5 91 48.4
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 2.0e-13 79.3 87 52.9
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.0e-13 79.3 90 51.1
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 2.0e-13 79.3 110 46.4
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 4.4e-13 78.2 103 45.6
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 4.4e-13 78.2 67 64.2
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 5.8e-13 77.8 78 52.6
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 5.8e-13 77.8 78 52.6
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.6e-13 77.4 103 46.6
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 1.3e-12 76.6 91 47.3
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.3e-12 76.6 103 46.6
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.3e-12 76.6 103 46.6
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.3e-12 76.6 105 50.5
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 2.2e-12 75.9 64 60.9
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 3.8e-12 75.1 91 47.3
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.8e-12 75.1 103 45.6
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 1.4e-11 73.2 57 61.4
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 1.4e-11 73.2 102 50.0
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.9e-11 72.8 103 42.7
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 2.4e-11 72.4 104 43.3
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 2.4e-11 72.4 84 52.4
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 3.2e-11 72.0 84 44.0
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 4.2e-11 71.6 91 41.8
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 5.4e-11 71.2 71 56.3
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 5.4e-11 71.2 85 47.1
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 5.4e-11 71.2 53 67.9
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 7.1e-11 70.9 104 43.3
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 9.3e-11 70.5 59 62.7
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 9.3e-11 70.5 103 45.6
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 1.2e-10 70.1 108 42.6
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.1e-10 69.3 60 56.7
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.1e-10 69.3 58 51.7
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 3.5e-10 68.6 49 65.3
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 7.8e-10 67.4 108 44.4
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.0e-09 67.0 42 69.0
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 2.3e-09 65.9 66 53.0
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 1.5e-08 63.2 57 54.4
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 2.5e-08 62.4 59 52.5
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.3e-08 62.0 66 50.0
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 7.3e-08 60.8 47 61.7
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.6e-07 59.7 85 44.7
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.6e-07 59.7 64 54.7
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.6e-07 59.7 64 54.7
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 2.8e-07 58.9 71 45.1
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 2.8e-07 58.9 91 41.8
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 6.2e-07 57.8 53 52.8
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 8.1e-07 57.4 56 57.1
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 1.1e-06 57.0 50 56.0
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 1.1e-06 57.0 73 47.9
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 1.8e-06 56.2 58 50.0
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 1.8e-06 56.2 47 63.8
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 4.0e-06 55.1 37 62.2
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 4.0e-06 55.1 37 62.2
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 4.0e-06 55.1 41 53.7
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 6.9e-06 54.3 71 42.3
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 6.9e-06 54.3 47 53.2


User provided reference genes

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