Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011357 Camellia sinensis var. sinensis HOM05D001147 ORTHO05D000823 2.6e-192 675.2 343 100.0
Actinidia38663 Actinidia chinensis HOM05D001147 ORTHO05D000823 2.9e-95 352.8 348 60.3
Actinidia26812 Actinidia chinensis HOM05D001147 ORTHO05D000823 2.1e-93 346.7 343 60.6
Dinv41347 Davidia involucrata HOM05D001147 ORTHO05D000823 5.0e-87 325.5 347 57.1
Dinv42826 Davidia involucrata HOM05D001147 ORTHO05D000823 5.0e-87 325.5 357 55.7
Dinv43274 Davidia involucrata HOM05D001147 ORTHO05D000823 5.0e-87 325.5 357 55.7
vmacro06057 Vaccinium macrocarpon HOM05D001147 ORTHO05D000823 2.0e-80 303.5 351 55.0
DCAR_014802 Daucus carota HOM05D001147 ORTHO05D000823 8.0e-61 238.4 359 45.7
Nitab4.5_0011991g0010 Nicotiana tabacum HOM05D001147 ORTHO05D000823 1.3e-58 231.1 345 46.7
Nitab4.5_0003551g0080 Nicotiana tabacum HOM05D001147 ORTHO05D000823 1.6e-56 224.2 339 46.3
CiPaw.16G107300 Carya illinoinensis HOM05D001147 ORTHO05D000823 2.0e-56 223.8 370 42.7
Peaxi162Scf01313g00230 Petunia axillaris HOM05D001147 ORTHO05D000823 3.5e-56 223.0 353 44.8
Haze_19151 Corylus avellana HOM05D001147 ORTHO05D000823 4.5e-56 222.6 360 41.7
CAN.G160.1 Capsicum annuum HOM05D001147 ORTHO05D000823 8.6e-55 218.4 348 44.3
QL02p093985 Quercus lobata HOM05D001147 ORTHO05D000823 2.1e-53 213.8 363 41.6
PGSC0003DMG400011151 Solanum tuberosum HOM05D001147 ORTHO05D000823 1.5e-51 207.6 361 43.2
Lj9C720G1 Lonicera japonica HOM05D001147 ORTHO05D000823 1.3e-50 204.5 349 43.3
Sopen11g011020 Solanum pennellii HOM05D001147 ORTHO05D000823 2.9e-50 203.4 353 41.6
Cc06_g14570 Coffea canephora HOM05D001147 ORTHO05D000823 3.7e-50 203.0 353 42.2
Solyc07g005910.3 Solanum lycopersicum HOM05D001147 ORTHO05D000823 6.4e-50 202.2 360 41.1
Peaxi162Scf01313g00232 Petunia axillaris HOM05D001147 ORTHO05D000823 1.4e-49 201.1 352 42.3
MD15G1149000 Malus domestica HOM05D001147 ORTHO05D000823 2.4e-49 200.3 394 37.3
Sopen07g002040 Solanum pennellii HOM05D001147 ORTHO05D000823 2.4e-49 200.3 360 40.8
Cpa.g.sc46.192 Carica papaya HOM05D001147 ORTHO05D000823 4.1e-49 199.5 368 40.5
TAR626G1737 Trochodendron aralioides HOM05D001147 ORTHO05D000823 1.6e-48 197.6 374 38.5
PGSC0003DMG400009262 Solanum tuberosum HOM05D001147 ORTHO05D000823 3.5e-48 196.4 345 41.7
Solyc11g020850.3 Solanum lycopersicum HOM05D001147 ORTHO05D000823 4.6e-48 196.1 353 40.8
Prupe.7G266000 Prunus persica HOM05D001147 ORTHO05D000823 1.1e-46 191.4 399 36.8
Cfa020794 Carpinus fangiana HOM05D001147 ORTHO05D000823 7.3e-46 188.7 363 38.8
TWI34G0284 Tripterygium wilfordii HOM05D001147 ORTHO05D000823 4.7e-45 186.0 357 40.3
Sabra06G0138200 Salix brachista HOM05D001147 ORTHO05D000823 6.2e-45 185.7 357 40.3
TAR531G0003 Trochodendron aralioides HOM05D001147 ORTHO05D000823 1.4e-44 184.5 385 34.5
Thecc.09G153000 Theobroma cacao HOM05D001147 ORTHO05D000823 2.3e-44 183.7 399 36.1
MSTRG.26260 Avicennia marina HOM05D001147 ORTHO05D000823 4.0e-44 183.0 378 37.3
Oeu021339.1 Olea europaea HOM05D001147 ORTHO05D000823 6.8e-44 182.2 378 38.1
Manes.14G142200 Manihot esculenta HOM05D001147 ORTHO05D000823 2.0e-43 180.6 347 40.9
Peaxi162Scf00062g00112 Petunia axillaris HOM05D001147 ORTHO05D000823 2.9e-42 176.8 345 38.8
Sabra18G0089000 Salix brachista HOM05D002983 ORTHO05D003451 2.9e-42 176.8 351 38.7
Potri.018G103500 Populus trichocarpa HOM05D001147 ORTHO05D000823 1.4e-41 174.5 349 38.4
MD02G1005000 Malus domestica HOM05D001147 ORTHO05D000823 1.6e-40 171.0 396 35.1
Potri.006G181300 Populus trichocarpa HOM05D001147 ORTHO05D000823 3.5e-40 169.9 356 39.6
Ciclev10010396m.g Citrus clementina HOM05D001147 ORTHO05D000823 6.6e-39 165.6 401 33.2
Manes.06G031400 Manihot esculenta HOM05D001147 ORTHO05D000823 6.6e-39 165.6 354 38.4
Eucgr.C02510 Eucalyptus grandis HOM05D001147 ORTHO05D000823 1.9e-38 164.1 359 36.5
PGR102G2166 Punica granatum HOM05D001147 ORTHO05D000823 4.3e-38 162.9 342 34.8
ECA234G2552 Erigeron canadensis HOM05D001522 ORTHO05D001547 7.3e-38 162.2 353 37.1
Lalb_Chr08g0234221 Lupinus albus HOM05D001147 ORTHO05D000823 7.3e-38 162.2 364 36.3
Atru.chr7.337 Acer truncatum HOM05D001147 ORTHO05D000823 8.1e-37 158.7 356 35.1
ECA236G3004 Erigeron canadensis HOM05D001147 ORTHO05D000823 1.1e-36 158.3 352 38.6
Ca_21150_v3 Cicer arietinum L. HOM05D001147 ORTHO05D000823 4.0e-36 156.4 375 34.9
MSTRG.10712 Avicennia marina HOM05D001147 ORTHO05D000823 6.8e-36 155.6 352 37.8
Duzib187G1988 Durio zibethinus HOM05D001147 ORTHO05D000823 6.8e-36 155.6 398 33.9
FAN23G2262 Fragaria x ananassa HOM05D001147 ORTHO05D000823 6.8e-36 155.6 389 35.5
FvH4_1g00620 Fragaria vesca HOM05D001147 ORTHO05D000823 2.6e-35 153.7 389 35.0
FAN28G1301 Fragaria x ananassa HOM05D001147 ORTHO05D000823 2.6e-35 153.7 389 35.0
GSVIVG01023657001 Vitis vinifera HOM05D001147 ORTHO05D000823 2.6e-35 153.7 345 37.1
CANSAT11G0976 Cannabis sativa HOM05D001147 ORTHO05D000823 3.4e-35 153.3 361 35.2
Lj6g0023022 Lotus japonicus HOM05D001147 ORTHO05D000823 3.4e-35 153.3 360 36.4
VMungo1309G1356 Vigna mungo HOM05D001147 ORTHO05D000823 4.4e-35 152.9 348 37.6
DCAR_019416 Daucus carota HOM05D001147 ORTHO05D000823 7.6e-35 152.1 346 37.0
Lj4g0012991 Lotus japonicus HOM05D001147 ORTHO05D000823 7.6e-35 152.1 364 35.4
FAN26G2137 Fragaria x ananassa HOM05D001147 ORTHO05D000823 1.7e-34 151.0 389 35.0
Glyma.02G206200 Glycine max HOM05D001147 ORTHO05D000823 1.7e-34 151.0 369 35.2
MSTRG.6159 Avicennia marina HOM05D001147 ORTHO05D000823 3.7e-34 149.8 378 36.0
TPR.G24887 Trifolium pratense HOM05D001147 ORTHO05D000823 6.0e-32 142.5 357 34.5
COL.COLO4_23938 Corchorus olitorius HOM05D001147 ORTHO05D000823 1.0e-31 141.7 383 33.4
Phvul.009G196200 Phaseolus vulgaris HOM05D001147 ORTHO05D000823 1.3e-31 141.4 361 36.6
Aqoxy7G02387 Aquilegia oxysepala HOM05D001147 ORTHO05D000823 3.0e-31 140.2 382 32.7
Psat7g006720 Pisum sativum HOM05D001147 ORTHO05D000823 3.0e-31 140.2 365 34.2
Glyma.15G194200 Glycine max HOM05D001147 ORTHO05D000823 5.1e-31 139.4 365 36.2
Glyma.17G071800 Glycine max HOM05D001147 ORTHO05D000823 8.6e-31 138.7 382 33.5
Medtr4g130400 Medicago truncatula HOM05D001147 ORTHO05D000823 2.5e-30 137.1 367 33.8
VMungo1215G2388 Vigna mungo HOM05D001147 ORTHO05D000823 2.1e-29 134.0 362 34.8
Glyma.09G087800 Glycine max HOM05D001147 ORTHO05D000823 4.7e-29 132.9 380 34.2
Glyma.04G155400 Glycine max HOM05D001147 ORTHO05D000823 8.1e-29 132.1 362 34.8
RcHm_v2.0_Chr2g0085241 Rosa chinensis HOM05D001147 ORTHO05D000823 8.1e-29 132.1 370 34.1
Ah.09g228730 Amaranthus hybridus HOM05D001147 ORTHO05D000823 3.1e-28 130.2 382 30.6
Sed0026266 Sechium edule HOM05D001147 ORTHO05D000823 3.1e-28 130.2 353 32.0
HanXRQChr12g0357791 Helianthus annuus HOM05D001147 ORTHO05D000823 5.2e-28 129.4 347 33.1
Sed0005842 Sechium edule HOM05D001147 ORTHO05D000823 6.8e-28 129.0 358 32.4
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 2.0e-27 127.5 380 31.3
Sc18g0003070 Simmondsia chinensis HOM05D001147 ORTHO05D000823 2.0e-27 127.5 360 36.4
EL10Ac8g18921 Beta vulgaris HOM05D001147 ORTHO05D000823 2.6e-27 127.1 375 31.2
Nitab4.5_0008310g0040 Nicotiana tabacum HOM05D001147 ORTHO05D000823 2.6e-27 127.1 334 34.1
Lalb_Chr07g0179961 Lupinus albus HOM05D001147 ORTHO05D000823 4.4e-27 126.3 375 32.5
Phvul.003G154100 Phaseolus vulgaris HOM05D001147 ORTHO05D000823 2.2e-26 124.0 374 32.4
Lsat_1_v5_gn_8_64600 Lactuca sativa HOM05D001147 ORTHO05D000823 1.4e-25 121.3 334 32.9
Lalb_Chr11g0072491 Lupinus albus HOM05D001147 ORTHO05D000823 1.4e-25 121.3 360 32.2
arahy.Tifrunner.gnm1.ann1.BQXN30 Arachis hypogaea HOM05D001147 ORTHO05D000823 2.1e-24 117.5 354 33.3
arahy.Tifrunner.gnm1.ann1.IW6P38 Arachis hypogaea HOM05D001147 ORTHO05D000823 2.7e-24 117.1 354 33.3
AUR62025358 Chenopodium quinoa HOM05D001147 ORTHO05D000823 2.7e-24 117.1 381 28.6
Nn8g40006 Nelumbo nucifera HOM05D001147 ORTHO05D000823 2.7e-24 117.1 367 30.5
ClCG06G012580 Citrullus lanatus HOM05D001147 ORTHO05D000823 1.3e-23 114.8 337 31.2
Gohir.A08G236000 Gossypium hirsutum HOM05D001147 ORTHO05D000823 1.3e-23 114.8 368 29.3
MELO3C010205.2 Cucumis melo HOM05D001147 ORTHO05D000823 3.0e-23 113.6 350 30.3
SalBow1G4907 Salvia bowleyana HOM05D001147 ORTHO05D000823 3.0e-23 113.6 349 31.5
Gorai.004G273600 Gossypium raimondii HOM05D001147 ORTHO05D000823 5.1e-23 112.8 369 29.3
AUR62028359 Chenopodium quinoa HOM05D001147 ORTHO05D000823 1.5e-22 111.3 380 27.9
TAR628G1061 Trochodendron aralioides HOM05D001147 ORTHO05D000823 1.5e-22 111.3 212 37.3
Nitab4.5_0002329g0210 Nicotiana tabacum HOM05D001147 ORTHO05D000823 2.5e-22 110.5 292 32.9
HanXRQChr05g0141651 Helianthus annuus HOM05D001147 ORTHO05D000823 5.6e-22 109.4 342 32.5
PSO782G1029 Papaver somniferum HOM05D001147 ORTHO05D000823 9.6e-22 108.6 397 29.0
MBI14_g08688_MAGBIO Magnolia biondii HOM05D001147 ORTHO05D000823 2.8e-21 107.1 416 29.1
Gohir.D08G099300 Gossypium hirsutum HOM05D001147 ORTHO05D000823 4.8e-21 106.3 397 28.5
Gorai.004G107100 Gossypium raimondii HOM05D001147 ORTHO05D000823 6.2e-21 105.9 392 28.1
Migut.J01385 Erythranthe guttata HOM05D001147 ORTHO05D000823 2.4e-20 104.0 340 33.2
CsaV3_1G029140 Cucumis sativus L. HOM05D000021 ORTHO05D000010 3.1e-20 103.6 352 31.0
Aa31LG3G13670 Aethionema arabicum HOM05D001147 ORTHO05D000823 9.0e-20 102.1 345 32.2
Gohir.A08G088200 Gossypium hirsutum HOM05D001147 ORTHO05D000823 9.0e-20 102.1 398 27.4
CARHR271570 Cardamine hirsuta HOM05D001147 ORTHO05D000823 1.3e-18 98.2 338 29.6
AL8G33880 Arabidopsis lyrata HOM05D001147 ORTHO05D000823 1.7e-18 97.8 341 30.2
Lalb_Chr06g0173231 Lupinus albus HOM05D001147 ORTHO05D000823 1.7e-18 97.8 349 30.9
SGA_v2.0_scaffold265G46086 Striga asiatica HOM05D001147 ORTHO05D000823 2.2e-18 97.4 333 31.2
AUR62010738 Chenopodium quinoa HOM05D001147 ORTHO05D000823 2.9e-18 97.1 375 27.2
AT5G57830 Arabidopsis thaliana HOM05D001147 ORTHO05D000823 3.8e-18 96.7 338 29.9
Ca_03163_v3 Cicer arietinum L. HOM05D001147 ORTHO05D000823 3.8e-18 96.7 359 29.2
Carub.0008s1836 Capsella rubella HOM05D001147 ORTHO05D000823 1.4e-17 94.7 339 29.5
arahy.Tifrunner.gnm1.ann1.U2WZ8A Arachis hypogaea HOM05D001147 ORTHO05D000823 2.4e-17 94.0 360 28.6
arahy.Tifrunner.gnm1.ann1.6KF5RS Arachis hypogaea HOM05D001147 ORTHO05D000823 4.2e-17 93.2 360 28.6
Thhalv10013794m.g Eutrema salsugineum HOM05D001147 ORTHO05D000823 4.2e-17 93.2 337 31.2
Sp6g19520 Schrenkiella parvula HOM05D001147 ORTHO05D000823 4.2e-17 93.2 273 32.2
Lalb_Chr23g0275651 Lupinus albus HOM05D001147 ORTHO05D000823 5.4e-17 92.8 360 30.6
Gohir.D08G256400 Gossypium hirsutum HOM05D001147 ORTHO05D000823 2.7e-16 90.5 353 27.8
THA.LOC104813537 Tarenaya hassleriana HOM05D001147 ORTHO05D000823 1.3e-15 88.2 343 30.0
BolC9t57824H Brassica oleracea HOM05D001147 ORTHO05D000823 2.3e-15 87.4 275 30.5
A10p15210 Brassica napus HOM05D001147 ORTHO05D000823 8.7e-15 85.5 275 30.5
BraA10t43604Z Brassica rapa HOM05D001147 ORTHO05D000823 8.7e-15 85.5 275 30.5
Hund07637 Selenicereus undatus HOM05D001147 ORTHO05D000823 1.1e-14 85.1 386 27.7
BcaC04g19923 Brassica carinata HOM05D001147 ORTHO05D000823 1.9e-14 84.3 205 33.2
C09p49730 Brassica napus HOM05D001147 ORTHO05D000823 1.9e-14 84.3 275 29.8
ATR0739G021 Amborella trichopoda HOM05D001147 ORTHO05D000823 1.6e-13 81.3 427 24.8
TPR.G14467 Trifolium pratense HOM05D001147 ORTHO05D000823 2.8e-13 80.5 337 28.5
C02p13810 Brassica napus HOM05D001147 ORTHO05D000823 9.0e-12 75.5 332 26.8
BolC2t07500H Brassica oleracea HOM05D001147 ORTHO05D000823 9.0e-12 75.5 332 26.8
A02p08160 Brassica napus HOM05D001147 ORTHO05D000823 1.2e-11 75.1 275 25.5
Psat1g025880 Pisum sativum HOM05D001147 ORTHO05D000823 2.0e-11 74.3 351 28.2
PGSC0003DMG400007910 Solanum tuberosum HOM05D001147 ORTHO05D000823 2.0e-11 74.3 324 30.6
TAR049G0007 Trochodendron aralioides HOM05D001147 ORTHO05D000823 5.8e-11 72.8 110 40.0
unitig_37.g12749 Utricularia gibba HOM05D001147 ORTHO05D000823 7.6e-11 72.4 337 28.5
Sopen12g004780 Solanum pennellii HOM05D001147 ORTHO05D000823 1.3e-10 71.6 338 29.3
Solyc12g009900.3 Solanum lycopersicum HOM05D001147 ORTHO05D000823 2.2e-10 70.9 324 29.3
Atru.chr7.338 Acer truncatum HOM05D001147 ORTHO05D000823 1.1e-09 68.6 150 36.0
AL7G21290 Arabidopsis lyrata HOM05D001147 ORTHO05D000823 1.6e-08 64.7 246 24.0
Sp7g28710 Schrenkiella parvula HOM05D001147 ORTHO05D000823 7.9e-08 62.4 336 24.1
SalBow1G7781 Salvia bowleyana HOM05D001147 ORTHO05D000823 1.8e-07 61.2 140 33.6
Carub.0007s0973 Capsella rubella HOM05D001147 ORTHO05D000823 2.3e-07 60.8 246 23.2
Thhalv10025538m.g Eutrema salsugineum HOM05D001147 ORTHO05D000823 2.3e-07 60.8 330 23.9
CAN.G551.65 Capsicum annuum HOM05D001147 ORTHO05D000823 3.9e-07 60.1 204 33.3
CARHR238680 Cardamine hirsuta HOM05D001147 ORTHO05D000823 5.1e-07 59.7 143 28.0
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 7.4e-06 55.8 128 28.1


User provided reference genes

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