Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 6.4e-137 490.7 246 100.0
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.3e-132 476.5 247 98.4
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 8.2e-108 394.0 247 80.2
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.3e-105 386.7 246 81.7
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.6e-103 379.8 248 80.6
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 2.1e-103 379.4 246 78.9
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.1e-101 373.6 288 69.4
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 1.5e-101 373.2 246 78.5
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 6.9e-99 364.4 248 76.6
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 5.0e-97 358.2 247 76.5
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.4e-96 356.7 247 75.7
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 1.4e-96 356.7 247 75.7
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 5.5e-96 354.8 247 74.9
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 7.2e-96 354.4 247 74.9
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 7.2e-96 354.4 254 73.2
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 9.4e-96 354.0 249 77.1
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 6.1e-95 351.3 247 74.5
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 2.3e-94 349.4 246 74.0
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 3.0e-94 349.0 247 73.7
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 5.1e-94 348.2 246 74.8
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.1e-93 347.1 246 74.0
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 2.0e-93 346.3 247 75.7
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 2.6e-93 345.9 245 74.3
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 9.7e-93 344.0 253 74.3
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 1.7e-92 343.2 249 72.7
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 3.7e-92 342.0 259 74.5
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 4.1e-91 338.6 252 71.8
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 5.3e-91 338.2 248 74.2
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 2.0e-90 336.3 252 71.8
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 5.9e-90 334.7 266 67.7
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 3.8e-89 332.0 247 71.7
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 6.5e-89 331.3 244 72.5
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 3.2e-88 328.9 244 69.3
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 5.5e-88 328.2 250 72.4
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 9.4e-88 327.4 247 70.0
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 1.6e-87 326.6 248 71.0
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.6e-87 326.6 276 65.9
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 2.1e-87 326.2 244 72.1
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.7e-87 325.9 246 71.1
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 4.7e-87 325.1 246 70.3
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 6.1e-87 324.7 247 70.4
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 8.0e-87 324.3 248 71.4
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 1.4e-86 323.6 249 70.3
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 1.8e-86 323.2 252 70.6
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.8e-86 323.2 248 71.8
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 3.0e-86 322.4 245 68.2
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 4.0e-86 322.0 247 69.2
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 6.7e-86 321.2 248 70.2
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 6.7e-86 321.2 248 70.2
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 8.8e-86 320.9 248 69.8
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 8.8e-86 320.9 248 70.6
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 1.1e-85 320.5 252 71.0
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 7.5e-85 317.8 248 68.5
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.3e-84 317.0 247 68.0
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 1.3e-84 317.0 247 67.6
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.8e-84 315.8 247 70.0
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.7e-84 315.5 247 69.2
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.7e-84 315.5 247 69.2
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 4.8e-84 315.1 248 67.3
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 4.8e-84 315.1 253 68.0
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 6.3e-84 314.7 247 70.0
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 6.3e-84 314.7 247 70.0
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 6.3e-84 314.7 247 68.4
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.1e-83 313.9 247 69.2
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.1e-83 313.9 247 67.6
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 1.1e-83 313.9 248 66.9
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.4e-83 313.5 247 70.0
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 1.8e-83 313.2 285 63.2
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 1.8e-83 313.2 251 66.1
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 2.4e-83 312.8 248 67.7
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 5.3e-83 311.6 249 67.1
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 3.5e-82 308.9 219 70.3
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 5.9e-82 308.1 257 65.0
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 1.3e-81 307.0 249 66.3
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 1.7e-81 306.6 247 67.2
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 1.7e-81 306.6 251 64.9
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.7e-81 306.6 344 54.4
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.2e-81 306.2 255 63.5
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 2.2e-81 306.2 248 68.1
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 3.8e-81 305.4 249 66.3
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.5e-80 303.5 249 65.9
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.5e-80 303.5 249 65.9
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.9e-80 303.1 256 64.8
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.2e-80 302.0 248 65.7
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.2e-79 300.4 190 82.1
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 2.1e-79 299.7 160 86.2
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 2.1e-79 299.7 249 69.5
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 4.7e-79 298.5 246 66.7
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 8.8e-78 294.3 274 60.2
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 5.7e-77 291.6 246 66.7
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 9.8e-77 290.8 238 66.4
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 2.8e-76 289.3 246 66.3
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 2.8e-76 289.3 246 66.3
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 1.1e-75 287.3 246 65.4
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 1.4e-75 287.0 246 65.4
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 1.1e-72 277.3 265 57.7
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 3.7e-68 262.3 246 61.0
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 3.1e-67 259.2 130 94.6
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 4.1e-67 258.8 173 73.4
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 5.0e-65 251.9 247 58.3
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 5.0e-65 251.9 247 59.1
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 9.2e-59 231.1 221 55.2
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 4.6e-58 228.8 211 55.9
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 4.6e-58 228.8 184 62.0
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.1e-56 224.2 155 76.1
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 9.5e-56 221.1 110 93.6
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 1.2e-55 220.7 130 82.3
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 8.3e-52 208.0 131 75.6
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 6.0e-50 201.8 194 60.3
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.9e-48 196.8 130 73.1
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 1.2e-45 187.6 199 58.8
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 2.8e-39 166.4 90 85.6
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-34 149.4 96 84.4
CSS0023138 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-32 143.7 84 92.9
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 2.5e-32 143.3 107 66.4
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 7.6e-29 131.7 91 68.1
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 1.7e-28 130.6 169 43.8
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 7.8e-26 121.7 114 60.5
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 7.3e-24 115.2 98 58.2
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 2.4e-22 110.2 56 91.1
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.2e-18 97.8 49 87.8
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 2.5e-16 90.1 56 75.0
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 4.0e-14 82.8 70 55.7
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 4.2e-11 72.8 38 76.3
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 6.2e-07 58.9 31 80.6
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 1.8e-06 57.4 34 67.6
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 1.8e-06 57.4 38 65.8


User provided reference genes

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