Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.5e-79 299.7 170 100.0
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 2.8e-38 162.5 181 59.1
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 2.2e-35 152.9 115 77.4
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 6.0e-33 144.8 112 73.2
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 6.0e-33 144.8 112 73.2
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 7.8e-33 144.4 96 79.2
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.5e-31 140.2 100 77.0
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 7.3e-31 137.9 105 73.3
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 1.6e-30 136.7 179 53.1
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 1.6e-30 136.7 178 52.2
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.1e-30 136.3 110 68.2
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 2.8e-30 136.0 86 83.7
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 3.6e-30 135.6 180 51.7
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 3.6e-30 135.6 86 83.7
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 4.7e-30 135.2 176 51.7
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 6.2e-30 134.8 192 51.6
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.4e-29 133.7 114 67.5
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 1.8e-29 133.3 174 52.3
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 2.3e-29 132.9 116 67.2
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 4.0e-29 132.1 172 52.3
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 5.2e-29 131.7 91 76.9
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 8.9e-29 131.0 99 69.7
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 8.9e-29 131.0 103 71.8
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 8.9e-29 131.0 181 47.0
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 1.5e-28 130.2 177 50.3
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.5e-28 130.2 113 61.9
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.5e-28 130.2 103 71.8
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.5e-28 130.2 172 48.3
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.0e-28 129.8 103 71.8
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.4e-28 129.0 113 61.9
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 4.4e-28 128.6 184 52.2
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 5.8e-28 128.3 173 50.9
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 5.8e-28 128.3 173 50.9
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 5.8e-28 128.3 173 50.9
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 7.6e-28 127.9 118 61.9
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.3e-27 127.1 183 49.2
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 2.2e-27 126.3 184 46.2
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 2.2e-27 126.3 183 46.4
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 2.2e-27 126.3 88 77.3
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 2.9e-27 125.9 108 65.7
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 2.9e-27 125.9 171 48.0
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 3.8e-27 125.6 188 47.3
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 3.8e-27 125.6 170 48.2
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 4.9e-27 125.2 109 64.2
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 4.9e-27 125.2 90 72.2
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 4.9e-27 125.2 171 47.4
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 8.4e-27 124.4 98 68.4
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 1.1e-26 124.0 105 69.5
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.1e-26 124.0 77 85.7
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 3.2e-26 122.5 165 50.3
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 3.2e-26 122.5 170 46.5
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.2e-26 122.5 167 49.1
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 5.4e-26 121.7 166 48.8
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 5.4e-26 121.7 166 48.8
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 5.4e-26 121.7 115 62.6
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 5.4e-26 121.7 150 51.3
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 9.2e-26 120.9 111 63.1
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 2.7e-25 119.4 81 75.3
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 3.5e-25 119.0 104 68.3
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 6.0e-25 118.2 111 62.2
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 7.8e-25 117.9 75 82.7
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 7.8e-25 117.9 108 64.8
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 1.0e-24 117.5 111 62.2
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 1.0e-24 117.5 111 62.2
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 1.0e-24 117.5 111 62.2
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.3e-24 117.1 182 46.2
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 1.3e-24 117.1 109 61.5
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 1.7e-24 116.7 82 76.8
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 1.7e-24 116.7 171 45.6
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 2.3e-24 116.3 107 62.6
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 2.3e-24 116.3 83 74.7
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 3.0e-24 115.9 111 59.5
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 3.0e-24 115.9 95 69.5
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 3.0e-24 115.9 113 61.1
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 3.9e-24 115.5 181 46.4
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 5.1e-24 115.2 91 68.1
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 6.6e-24 114.8 101 63.4
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 8.6e-24 114.4 122 54.9
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 1.5e-23 113.6 91 67.0
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 1.9e-23 113.2 110 57.3
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.9e-23 113.2 186 46.2
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 2.5e-23 112.8 107 58.9
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 2.5e-23 112.8 92 67.4
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 3.3e-23 112.5 108 60.2
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 3.3e-23 112.5 71 81.7
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 3.3e-23 112.5 66 83.3
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 4.3e-23 112.1 110 59.1
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 4.3e-23 112.1 82 69.5
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 1.2e-22 110.5 76 75.0
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.2e-22 110.5 161 49.1
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.6e-22 110.2 68 77.9
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 3.1e-21 105.9 170 42.9
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 5.2e-21 105.1 74 71.6
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 1.5e-20 103.6 171 42.7
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 1.5e-20 103.6 109 53.2
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 8.4e-19 97.8 85 64.7
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.9e-18 96.7 60 80.0
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 9.3e-18 94.4 84 61.9
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 7.3e-15 84.7 65 64.6
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.5e-12 77.0 73 58.9
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 5.8e-12 75.1 93 47.3
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 2.2e-11 73.2 106 42.5
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.1e-10 70.9 80 55.0
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 1.2e-09 67.4 86 41.9
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 2.7e-09 66.2 113 44.2
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 3.5e-09 65.9 74 51.4
MCO02G394 Micromonas commoda HOM05D007425 ORTHO05D009334 4.8e-06 55.5 109 34.9


User provided reference genes

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