Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011325 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.0e-77 292.4 149 100.0
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.8e-68 261.5 133 99.2
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 6.8e-57 224.2 133 85.0
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 5.7e-56 221.1 133 85.0
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 7.0e-54 214.2 132 81.8
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.5e-51 206.5 133 76.7
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 4.7e-50 201.4 134 74.6
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 7.5e-48 194.1 133 72.2
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 1.3e-47 193.4 133 71.4
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 3.7e-47 191.8 132 72.7
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 6.4e-47 191.0 133 69.9
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 6.4e-47 191.0 134 72.4
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 8.3e-47 190.7 133 69.2
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 8.3e-47 190.7 133 69.9
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 4.1e-46 188.3 133 69.9
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 5.4e-46 188.0 133 70.7
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 2.7e-45 185.7 133 68.4
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 7.8e-45 184.1 133 67.7
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 6.6e-44 181.0 133 67.7
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.1e-43 180.3 133 65.4
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 1.5e-43 179.9 133 66.9
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 5.6e-43 177.9 133 64.7
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 1.2e-42 176.8 133 66.9
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 1.6e-42 176.4 133 66.2
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.8e-42 175.6 133 63.9
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 4.7e-42 174.9 133 63.9
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 8.1e-42 174.1 139 67.6
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.1e-41 173.7 134 64.9
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 1.4e-41 173.3 134 64.9
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.4e-41 173.3 133 63.2
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 1.4e-41 173.3 133 66.9
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.4e-41 173.3 134 64.2
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 4.0e-41 171.8 134 65.7
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 4.0e-41 171.8 134 65.7
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 6.8e-41 171.0 133 60.2
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 8.9e-41 170.6 134 61.9
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 1.2e-40 170.2 133 63.9
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 2.0e-40 169.5 133 65.4
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 2.0e-40 169.5 133 62.4
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 2.6e-40 169.1 133 60.2
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 4.4e-40 168.3 133 61.7
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 7.5e-40 167.5 133 61.7
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 9.9e-40 167.2 132 62.1
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 1.7e-39 166.4 133 62.4
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 2.2e-39 166.0 133 62.4
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 1.1e-38 163.7 133 63.9
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 1.1e-38 163.7 133 59.4
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 1.4e-38 163.3 133 60.9
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 1.9e-38 162.9 134 61.2
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 1.9e-38 162.9 133 58.6
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 2.4e-38 162.5 133 60.2
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 4.1e-38 161.8 147 56.5
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 7.1e-38 161.0 133 58.6
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 2.7e-37 159.1 134 59.7
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 4.6e-37 158.3 134 61.2
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 6.0e-37 157.9 133 59.4
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 3.0e-36 155.6 134 61.2
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 3.9e-36 155.2 147 55.1
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 3.9e-36 155.2 135 56.3
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 5.1e-36 154.8 139 59.7
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 8.6e-36 154.1 133 57.1
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 8.6e-36 154.1 133 58.6
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 2.5e-35 152.5 133 57.1
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 1.2e-34 150.2 147 53.7
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 2.8e-34 149.1 132 56.1
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 6.2e-34 147.9 116 66.4
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 4.0e-33 145.2 135 57.8
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 4.0e-33 145.2 133 59.4
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 3.4e-32 142.1 132 55.3
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 4.4e-32 141.7 134 56.7
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 4.4e-32 141.7 116 63.8
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 7.6e-32 141.0 133 54.1
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 3.8e-31 138.7 133 55.6
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 2.1e-29 132.9 133 57.1
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.3e-28 130.2 130 55.4
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 8.7e-28 127.5 117 57.3
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 8.7e-28 127.5 133 52.6
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.5e-27 126.7 130 56.2
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 1.5e-27 126.7 133 52.6
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 5.6e-27 124.8 135 49.6
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 8.1e-26 120.9 133 46.6
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 1.3e-23 113.6 144 47.2
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 1.5e-19 100.1 135 43.0
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 1.1e-17 94.0 136 41.2
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 2.6e-16 89.4 146 39.7
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 9.9e-16 87.4 114 41.2
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 4.9e-15 85.1 78 55.1
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 3.2e-14 82.4 105 41.9
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 9.3e-14 80.9 71 53.5
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 7.9e-13 77.8 67 52.2
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 1.4e-09 67.0 158 32.9


User provided reference genes

Program Settings