Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 8.0e-15 84.0 42 100.0
CSS0011895 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 4.8e-12 74.7 39 97.4
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 5.3e-11 71.2 42 83.3
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 2.0e-10 69.3 42 78.6
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 4.5e-10 68.2 42 78.6
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 7.7e-10 67.4 42 76.2
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 7.7e-10 67.4 42 81.0
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.7e-09 66.2 42 76.2
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 1.7e-09 66.2 42 73.8
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.7e-09 66.2 42 78.6
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.7e-09 66.2 42 78.6
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 5.0e-09 64.7 42 73.8
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 5.0e-09 64.7 42 73.8
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 5.0e-09 64.7 42 73.8
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 1.5e-08 63.2 42 73.8
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 3.2e-08 62.0 42 73.8
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 4.2e-08 61.6 42 71.4
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 5.5e-08 61.2 42 71.4
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 7.2e-08 60.8 42 69.0
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 1.6e-07 59.7 42 66.7
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.6e-07 59.7 42 71.4
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.6e-07 59.7 42 71.4
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 1.6e-07 59.7 42 69.0
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 2.1e-07 59.3 42 66.7
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 2.1e-07 59.3 42 64.3
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 2.7e-07 58.9 42 64.3
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 4.7e-07 58.2 42 66.7
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 4.7e-07 58.2 42 66.7
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.7e-07 58.2 42 66.7
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.7e-07 58.2 42 66.7
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.7e-07 58.2 42 66.7
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 8.0e-07 57.4 42 66.7
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 1.0e-06 57.0 42 64.3
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 1.0e-06 57.0 42 61.9
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.8e-06 56.2 40 67.5
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 1.8e-06 56.2 42 64.3
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 2.3e-06 55.8 41 58.5
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 3.0e-06 55.5 42 61.9
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 4.0e-06 55.1 42 64.3
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 4.0e-06 55.1 42 57.1
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 5.2e-06 54.7 40 67.5
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 6.7e-06 54.3 42 61.9
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 6.7e-06 54.3 42 61.9
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 8.8e-06 53.9 41 63.4


User provided reference genes

Program Settings