Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 9.5e-84 313.5 166 100.0
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 9.5e-84 313.5 166 100.0
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.5e-60 236.5 166 77.7
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 1.9e-55 219.5 164 73.8
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.9e-52 209.5 164 72.0
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 6.2e-51 204.5 146 77.4
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 5.8e-49 198.0 164 68.3
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 9.9e-49 197.2 164 66.5
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 1.3e-48 196.8 164 66.5
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 7.1e-47 191.0 164 64.6
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.6e-46 189.9 164 65.2
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 7.8e-46 187.6 164 65.2
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 6.6e-45 184.5 172 67.4
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 1.9e-44 183.0 164 62.8
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.3e-43 180.3 165 63.0
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 3.4e-41 172.2 155 61.9
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 7.1e-39 164.5 177 57.1
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 3.5e-38 162.2 174 56.3
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 7.9e-38 161.0 171 56.7
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 7.9e-38 161.0 171 56.7
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 2.5e-36 156.0 174 55.2
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.5e-36 156.0 164 54.9
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.3e-36 155.6 178 57.3
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 4.3e-36 155.2 177 54.8
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.3e-36 155.2 177 55.9
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 7.4e-36 154.5 174 56.9
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 9.6e-36 154.1 164 56.7
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 2.1e-35 152.9 171 55.0
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 8.1e-35 151.0 155 58.1
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 1.4e-34 150.2 164 53.7
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.8e-34 149.8 114 72.8
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 2.4e-34 149.4 156 58.3
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 2.4e-34 149.4 154 57.8
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 5.3e-34 148.3 152 60.5
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 1.2e-33 147.1 152 61.2
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.0e-32 144.1 174 52.9
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.7e-32 143.3 90 82.2
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 2.2e-32 142.9 169 55.0
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.9e-32 142.5 171 53.8
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 6.5e-32 141.4 175 52.0
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.1e-31 140.6 168 53.0
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 1.4e-31 140.2 101 72.3
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 3.2e-31 139.0 168 52.4
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 3.2e-31 139.0 161 54.0
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 3.2e-31 139.0 178 51.7
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 4.2e-31 138.7 172 52.9
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 4.2e-31 138.7 185 49.2
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 1.6e-30 136.7 170 52.4
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.7e-30 136.0 145 53.8
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 4.6e-30 135.2 166 53.0
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 6.0e-30 134.8 161 53.4
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.8e-29 133.3 166 53.0
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.8e-29 133.3 181 48.1
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 3.0e-29 132.5 151 55.6
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 3.0e-29 132.5 179 47.5
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 3.9e-29 132.1 145 57.2
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 5.1e-29 131.7 134 59.0
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 5.1e-29 131.7 168 53.0
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 8.7e-29 131.0 85 78.8
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 1.1e-28 130.6 184 48.4
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.5e-28 130.2 86 80.2
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.5e-28 130.2 86 80.2
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.9e-28 129.8 85 78.8
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 2.5e-28 129.4 151 54.3
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 5.7e-28 128.3 182 50.0
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 5.7e-28 128.3 151 55.6
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 5.7e-28 128.3 86 76.7
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 7.4e-28 127.9 88 73.9
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 7.4e-28 127.9 161 51.6
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 9.6e-28 127.5 85 77.6
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 9.6e-28 127.5 150 52.7
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.3e-27 127.1 119 63.0
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.3e-27 127.1 160 54.4
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.3e-27 127.1 174 50.6
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.6e-27 126.7 169 52.1
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 1.6e-27 126.7 172 50.0
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 2.8e-27 125.9 85 77.6
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 2.8e-27 125.9 85 75.3
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 2.8e-27 125.9 85 75.3
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 2.8e-27 125.9 153 54.2
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 3.7e-27 125.6 86 75.6
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 4.8e-27 125.2 85 75.3
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 6.2e-27 124.8 170 50.6
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 8.2e-27 124.4 176 51.7
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 8.2e-27 124.4 171 47.4
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 8.2e-27 124.4 166 51.2
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 8.2e-27 124.4 86 74.4
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 8.2e-27 124.4 86 74.4
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 1.1e-26 124.0 189 47.6
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.1e-26 124.0 165 52.1
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.1e-26 124.0 85 76.5
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.1e-26 124.0 85 76.5
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.1e-26 124.0 162 51.9
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.4e-26 123.6 156 51.9
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.4e-26 123.6 156 51.9
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 1.4e-26 123.6 166 53.6
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.4e-26 123.6 166 53.6
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 1.4e-26 123.6 160 52.5
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.8e-26 123.2 85 76.5
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.8e-26 123.2 181 46.4
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 2.4e-26 122.9 170 49.4
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 4.0e-26 122.1 156 51.3
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 9.0e-26 120.9 168 50.0
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 9.0e-26 120.9 80 77.5
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 2.2e-24 116.3 85 70.6
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 7.1e-23 111.3 90 68.9
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 9.3e-23 110.9 99 62.6
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 3.5e-22 109.0 82 68.3
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 3.9e-21 105.5 131 49.6
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 8.7e-21 104.4 63 84.1
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 1.9e-20 103.2 83 66.3
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 1.9e-20 103.2 82 65.9
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 2.2e-19 99.8 171 42.7
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.9e-15 86.7 81 55.6
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 6.1e-14 81.6 84 51.2
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 2.5e-12 76.3 162 36.4
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 3.4e-09 65.9 49 69.4


User provided reference genes

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