Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011223 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 9.4e-110 400.2 202 100.0
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 1.6e-61 240.0 161 76.4
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 3.7e-58 228.8 181 65.7
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 2.7e-56 222.6 158 73.4
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 7.8e-56 221.1 178 64.0
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 1.0e-55 220.7 178 64.0
FAN14G2652 Fragaria x ananassa HOM05D006413 ORTHO05D007722 1.3e-55 220.3 178 63.5
CiPaw.02G050700 Carya illinoinensis HOM05D006413 ORTHO05D007722 5.6e-54 214.9 158 68.4
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 9.5e-54 214.2 178 61.8
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 1.6e-53 213.4 157 71.3
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 2.1e-53 213.0 158 67.7
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 3.6e-53 212.2 158 67.1
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 4.7e-53 211.8 178 63.5
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 1.1e-52 210.7 158 66.5
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 4.0e-52 208.8 158 66.5
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 6.8e-52 208.0 158 67.7
CANSAT01G2278 Cannabis sativa HOM05D006413 ORTHO05D007722 3.4e-51 205.7 156 67.3
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 4.4e-51 205.3 158 65.2
Ca_30995_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 4.4e-51 205.3 158 65.2
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 4.4e-51 205.3 158 63.9
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 4.4e-51 205.3 158 63.9
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 9.9e-51 204.1 157 68.2
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 1.3e-50 203.8 158 64.6
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 1.3e-50 203.8 162 67.3
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 1.7e-50 203.4 158 63.3
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 1.7e-50 203.4 162 67.9
Lj9A544G35 Lonicera japonica HOM05D006413 ORTHO05D007722 3.7e-50 202.2 195 55.9
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 4.9e-50 201.8 159 65.4
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 8.3e-50 201.1 158 63.3
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 1.1e-49 200.7 158 66.5
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 1.4e-49 200.3 158 68.4
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 1.4e-49 200.3 162 66.0
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 1.4e-49 200.3 162 66.7
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 1.4e-49 200.3 158 64.6
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 1.9e-49 199.9 162 66.7
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 1.9e-49 199.9 158 64.6
Sed0002155 Sechium edule HOM05D006413 ORTHO05D007722 4.1e-49 198.7 158 61.4
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 5.4e-49 198.4 158 61.4
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 5.4e-49 198.4 158 62.7
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 5.4e-49 198.4 158 65.2
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 7.1e-49 198.0 158 61.4
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 9.2e-49 197.6 158 64.6
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 1.2e-48 197.2 162 65.4
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 2.1e-48 196.4 158 62.0
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 4.6e-48 195.3 174 59.8
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 7.8e-48 194.5 166 59.0
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 2.3e-47 193.0 162 64.8
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 1.9e-46 189.9 162 61.1
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 4.3e-46 188.7 158 62.7
Oeu059793.1 Olea europaea HOM05D006413 ORTHO05D007722 5.6e-46 188.3 160 60.6
Psat2g176480 Pisum sativum HOM05D006413 ORTHO05D007722 2.1e-45 186.4 158 61.4
PSO063G3388 Papaver somniferum HOM05D006413 ORTHO05D007722 2.8e-45 186.0 156 61.5
PSO782G4045 Papaver somniferum HOM05D006413 ORTHO05D007722 3.6e-45 185.7 156 61.5
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 4.7e-45 185.3 163 60.1
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 1.8e-44 183.3 161 62.1
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 3.1e-44 182.6 158 60.1
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 2.0e-43 179.9 158 62.0
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 5.8e-43 178.3 181 54.1
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 2.2e-42 176.4 179 54.7
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 3.8e-42 175.6 158 60.1
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 3.8e-42 175.6 158 60.1
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 1.1e-41 174.1 158 60.8
vmacro12628 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 1.4e-41 173.7 117 74.4
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 1.4e-41 173.7 158 57.0
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 2.4e-41 172.9 158 60.1
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 2.4e-41 172.9 158 60.1
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 2.4e-41 172.9 158 60.1
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 2.4e-41 172.9 158 55.1
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 2.4e-41 172.9 178 55.1
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 3.2e-41 172.6 158 60.8
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 5.4e-41 171.8 158 60.1
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 5.4e-41 171.8 181 53.6
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 7.1e-41 171.4 158 58.2
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 9.3e-41 171.0 113 73.5
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 1.6e-40 170.2 178 55.6
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 1.3e-39 167.2 157 55.4
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 5.1e-39 165.2 158 57.6
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 5.1e-39 165.2 161 52.8
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 6.6e-39 164.9 158 57.0
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 6.6e-39 164.9 158 57.6
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 2.5e-38 162.9 157 52.9
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 2.5e-38 162.9 161 54.7
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 3.3e-38 162.5 161 54.0
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 1.3e-37 160.6 158 53.2
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 8.1e-37 157.9 158 52.5
Glyma.19G019600 Glycine max HOM05D006413 ORTHO05D007722 8.1e-37 157.9 122 64.8
Hund26913 Selenicereus undatus HOM05D006413 ORTHO05D007722 4.4e-35 152.1 161 50.9
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 4.9e-34 148.7 158 50.0
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 8.4e-34 147.9 162 48.8
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 2.4e-33 146.4 158 53.2
ATR0579G084 Amborella trichopoda HOM05D006413 ORTHO05D007722 3.2e-33 146.0 178 47.2
Psat3g197040 Pisum sativum HOM05D006413 ORTHO05D007722 1.3e-31 140.6 139 54.0
Ciclev10020349m.g Citrus clementina HOM05D006413 ORTHO05D007722 1.7e-31 140.2 116 62.9
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 3.0e-23 112.8 160 41.2
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 5.6e-22 108.6 158 39.9
SMO358G0223 Selaginella moellendorffii HOM05D006413 ORTHO05D007722 4.2e-17 92.4 142 38.7
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 1.3e-15 87.4 163 37.4
Nitab4.5_0000001g0010 Nicotiana tabacum HOM05D006413 ORTHO05D007722 2.3e-15 86.7 171 36.3
ATR0579G174 Amborella trichopoda HOM05D006413 ORTHO05D007722 3.9e-15 85.9 164 35.4
CDE12G0173 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 3.1e-12 76.3 85 45.9
Glyma.15G001000 Glycine max HOM05D006413 ORTHO05D007722 6.5e-10 68.6 46 76.1
MD05G1207200 Malus domestica HOM05D006413 ORTHO05D007722 3.5e-08 62.8 40 70.0


User provided reference genes

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