Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011221 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 1.2e-104 383.3 204 100.0
CSS0014738 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 2.3e-87 325.9 217 84.3
CSS0050002 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 5.1e-71 271.6 189 84.1
Actinidia03616 Actinidia chinensis HOM05D006832 ORTHO05D008292 8.5e-42 174.5 240 47.1
Rhsim04G0036900 Rhododendron simsii HOM05D006832 ORTHO05D008292 6.7e-39 164.9 245 48.2
RhsimUnG0013300 Rhododendron simsii HOM05D006832 ORTHO05D008292 6.7e-39 164.9 245 48.2
Dinv15008 Davidia involucrata HOM05D006832 ORTHO05D008292 1.5e-38 163.7 249 46.6
Rhsim04G0036600 Rhododendron simsii HOM05D006832 ORTHO05D008292 1.8e-36 156.8 247 47.4
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 2.4e-28 129.8 196 48.5
vmacro09407 Vaccinium macrocarpon HOM05D006832 ORTHO05D008292 1.0e-23 114.4 215 40.9
PGSC0003DMG401021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 2.0e-22 110.2 224 39.3
Sopen10g003390 Solanum pennellii HOM05D006832 ORTHO05D008292 2.6e-22 109.8 225 39.6
Cc05_g10910 Coffea canephora HOM05D006832 ORTHO05D008292 1.7e-21 107.1 246 39.0
Solyc10g007440.3 Solanum lycopersicum HOM05D006832 ORTHO05D008292 6.3e-21 105.1 225 38.2
Oeu021042.1 Olea europaea HOM05D006832 ORTHO05D008292 4.1e-20 102.4 244 38.1
GSVIVG01014166001 Vitis vinifera HOM05D006832 ORTHO05D008292 4.5e-19 99.0 225 40.0
CAN.G904.32 Capsicum annuum HOM05D006832 ORTHO05D008292 1.7e-18 97.1 172 41.3
QL08p024452 Quercus lobata HOM05D006832 ORTHO05D008292 4.2e-17 92.4 215 38.6
Potri.001G376900 Populus trichocarpa HOM05D006832 ORTHO05D008292 6.1e-16 88.6 194 38.1
PGSC0003DMG403021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 6.1e-16 88.6 220 36.4
Sopen10g003400 Solanum pennellii HOM05D006832 ORTHO05D008292 8.0e-16 88.2 220 36.8
Solyc10g007460.4 Solanum lycopersicum HOM05D006832 ORTHO05D008292 3.0e-15 86.3 220 36.4
MSTRG.6686 Avicennia marina HOM05D006832 ORTHO05D008292 8.8e-15 84.7 232 35.3
CANSAT56G2937 Cannabis sativa HOM05D006832 ORTHO05D008292 5.7e-14 82.0 221 31.7
Sabra16G0248300 Salix brachista HOM05D006832 ORTHO05D008292 1.7e-13 80.5 202 35.6
CARHR043680 Cardamine hirsuta HOM05D006832 ORTHO05D008292 3.7e-13 79.3 184 36.4
Thecc.07G123300 Theobroma cacao HOM05D006832 ORTHO05D008292 1.4e-12 77.4 218 34.4
Lalb_Chr25g0285711 Lupinus albus HOM05D006832 ORTHO05D008292 2.4e-12 76.6 200 37.0
Migut.M00714 Erythranthe guttata HOM05D006832 ORTHO05D008292 3.1e-12 76.3 231 33.8
Cpa.g.sc77.49 Carica papaya HOM05D006832 ORTHO05D008292 7.0e-12 75.1 200 37.5
MD03G1246100 Malus domestica HOM05D006832 ORTHO05D008292 7.0e-12 75.1 212 34.4
BraA08t32219Z Brassica rapa HOM05D006832 ORTHO05D008292 9.1e-12 74.7 164 41.5
Thhalv10011680m.g Eutrema salsugineum HOM05D006832 ORTHO05D008292 1.2e-11 74.3 188 38.3
Manes.15G097000 Manihot esculenta HOM05D006832 ORTHO05D008292 2.0e-11 73.6 205 33.2
BcaB04g17079 Brassica carinata HOM05D006832 ORTHO05D008292 4.5e-11 72.4 196 36.7
Gohir.D13G154700 Gossypium hirsutum HOM05D006832 ORTHO05D008292 4.5e-11 72.4 190 36.8
BraA08t32210Z Brassica rapa HOM05D006832 ORTHO05D008292 7.7e-11 71.6 187 36.4
Haze_09257 Corylus avellana HOM05D006832 ORTHO05D008292 7.7e-11 71.6 156 39.1
Lsat_1_v5_gn_9_100561 Lactuca sativa HOM05D006832 ORTHO05D008292 7.7e-11 71.6 248 30.2
Nitab4.5_0000383g0030 Nicotiana tabacum HOM05D006832 ORTHO05D008292 7.7e-11 71.6 283 29.7
Gorai.013G174800 Gossypium raimondii HOM05D006832 ORTHO05D008292 1.0e-10 71.2 187 36.4
Psat5g234400 Pisum sativum HOM05D006832 ORTHO05D008292 1.3e-10 70.9 223 31.4
FAN21G3714 Fragaria x ananassa HOM05D006832 ORTHO05D008292 2.2e-10 70.1 189 36.0
FvH4_3g18000 Fragaria vesca HOM05D006832 ORTHO05D008292 3.8e-10 69.3 224 34.4
A08p01560 Brassica napus HOM05D006832 ORTHO05D008292 5.0e-10 68.9 187 35.8
Cfa019523 Carpinus fangiana HOM05D006832 ORTHO05D008292 8.5e-10 68.2 154 37.7
Gohir.A13G150400 Gossypium hirsutum HOM05D006832 ORTHO05D008292 1.5e-09 67.4 188 36.2
THA.LOC104810427 Tarenaya hassleriana HOM05D006832 ORTHO05D008292 1.9e-09 67.0 186 34.4
FAN11G1423 Fragaria x ananassa HOM05D000051 ORTHO05D008292 5.5e-09 65.5 192 35.4
AL1G62020 Arabidopsis lyrata HOM05D006832 ORTHO05D008292 7.2e-09 65.1 195 36.4
MSTRG.14973 Avicennia marina HOM05D006832 ORTHO05D008292 7.2e-09 65.1 292 26.7
Eucgr.F03237 Eucalyptus grandis HOM05D006832 ORTHO05D008292 7.2e-09 65.1 164 36.6
Atru.chr2.2055_Atru.chr2.2057 Acer truncatum HOM05D006832 ORTHO05D008292 9.4e-09 64.7 177 32.2
Carub.0001s4265 Capsella rubella HOM05D006832 ORTHO05D008292 1.2e-08 64.3 183 33.9
Lj3g0027307 Lotus japonicus HOM05D006832 ORTHO05D008292 1.2e-08 64.3 228 32.9
RcHm_v2.0_Chr5g0030051 Rosa chinensis HOM05D006832 ORTHO05D008292 1.2e-08 64.3 231 32.5
BcaC01g01392 Brassica carinata HOM05D006832 ORTHO05D008292 2.7e-08 63.2 173 37.0
Prupe.4G158600 Prunus persica HOM05D006832 ORTHO05D008292 2.7e-08 63.2 264 29.5
C03p91530 Brassica napus HOM05D006832 ORTHO05D008292 6.1e-08 62.0 173 36.4
BolC3t21470H Brassica oleracea HOM05D006832 ORTHO05D008292 6.1e-08 62.0 173 36.4
AT1G53460 Arabidopsis thaliana HOM05D006832 ORTHO05D008292 1.0e-07 61.2 182 34.6
TPR.G13159 Trifolium pratense HOM05D006832 ORTHO05D008292 1.8e-07 60.5 221 31.2
Medtr2g075470 Medicago truncatula HOM05D006832 ORTHO05D008292 2.3e-07 60.1 199 32.2
MBI07_g00466_MAGBIO Magnolia biondii HOM05D006832 ORTHO05D008292 4.0e-07 59.3 215 30.7
Sp1g40000 Schrenkiella parvula HOM05D006832 ORTHO05D008292 4.0e-07 59.3 168 35.1
ECA240G3607 Erigeron canadensis HOM05D000109 ORTHO05D000210 6.8e-07 58.5 201 32.8
TWI38G0771 Tripterygium wilfordii HOM05D006832 ORTHO05D008292 8.8e-07 58.2 244 27.9
Ciclev10020819m.g Citrus clementina HOM05D006832 ORTHO05D008292 3.4e-06 56.2 177 31.6
Hund10460 Selenicereus undatus HOM05D006832 ORTHO05D008292 3.4e-06 56.2 171 33.3
A08p01660 Brassica napus HOM05D006832 ORTHO05D008292 7.5e-06 55.1 149 38.3
Peaxi162Scf00692g00121 Petunia axillaris HOM05D006832 ORTHO05D008292 9.8e-06 54.7 130 34.6


User provided reference genes

Program Settings