Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 5.6e-144 514.2 256 100.0
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 1.1e-70 270.8 230 67.0
CSS0044986 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 9.5e-67 257.7 294 53.4
CSS0008930 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D110104 2.4e-46 189.9 160 64.4
CSS0046477 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D112495 1.0e-36 157.9 160 58.1
CSS0023846 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D112692 8.7e-36 154.8 157 58.0
CSS0002524 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D111562 4.8e-34 149.1 160 55.0
CSS0007931 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D111137 3.1e-33 146.4 128 60.9
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.3e-30 134.8 198 44.4
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-29 134.0 198 44.4
CSS0044541 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D109434 1.6e-29 134.0 160 54.4
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-29 134.0 198 44.4
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-29 133.7 199 44.2
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-29 133.7 199 44.2
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.7e-29 133.3 199 44.7
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.7e-29 133.3 198 43.9
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.0e-28 131.3 199 43.7
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-28 130.6 199 43.7
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-28 130.2 198 43.4
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.1e-28 129.0 199 43.7
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.1e-28 129.0 199 43.2
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-27 127.9 243 35.4
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-27 127.5 243 35.4
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.2e-26 121.7 268 33.6
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-23 113.6 250 34.0
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-23 112.8 233 36.1
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.9e-22 110.5 238 35.3
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-22 109.8 233 35.6
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-21 107.5 239 33.9
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 3.5e-21 106.3 262 30.9
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-21 106.3 233 34.8
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.0e-21 105.5 261 33.7
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.7e-20 101.7 260 31.2
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-19 101.3 261 33.0
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-17 94.0 259 30.5
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-16 91.3 245 31.0
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-15 88.2 187 34.8
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 5.0e-15 85.9 243 32.5
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 2.5e-14 83.6 230 29.6
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.2e-14 83.2 227 30.4
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.1e-13 79.0 187 33.2
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.0e-12 78.2 204 32.8
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-11 72.8 129 37.2
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 5.7e-11 72.4 227 27.3
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.4e-11 72.0 254 28.3
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 1.7e-10 70.9 240 28.3
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.8e-10 69.3 89 39.3
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 2.4e-09 67.0 98 37.8
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.9e-09 65.5 77 41.6
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 2.0e-08 63.9 216 25.0
Rhsim09G0074300 Rhododendron simsii HOM05D000791 ORTHO05D000669 2.6e-08 63.5 247 29.1
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-08 62.8 69 46.4
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-08 62.8 69 46.4
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-08 62.8 69 46.4
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-08 62.8 69 46.4
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-08 62.8 69 46.4
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-08 62.8 69 46.4
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-08 62.8 69 46.4
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.0e-07 61.6 69 44.9
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.9e-07 60.1 77 40.3
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.5e-07 58.5 77 39.0
Rhsim01G0051400 Rhododendron simsii HOM05D007798 ORTHO05D023239 8.5e-07 58.5 142 34.5
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.5e-07 58.5 75 37.3
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 1.1e-06 58.2 215 24.2
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.5e-06 57.0 65 44.6
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 3.2e-06 56.6 229 25.8
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 7.2e-06 55.5 219 26.9


User provided reference genes

Program Settings