Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011199 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 2.0e-104 382.5 199 100.0
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 1.6e-24 117.1 111 58.6
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 3.5e-24 115.9 102 63.7
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 5.2e-20 102.1 102 58.8
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 5.7e-19 98.6 100 63.0
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 7.0e-17 91.7 102 52.9
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 1.2e-16 90.9 112 50.0
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 3.3e-14 82.8 101 58.4
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 5.6e-14 82.0 101 47.5
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 1.6e-13 80.5 104 59.6
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.1e-13 80.1 99 51.5
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 8.0e-13 78.2 99 48.5
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 4.0e-12 75.9 102 50.0
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 6.8e-12 75.1 98 54.1
TAR626G0200 Trochodendron aralioides HOM05D005864 ORTHO05D006770 3.7e-10 69.3 60 55.0
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 6.4e-10 68.6 91 47.3
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 1.1e-09 67.8 101 47.5
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 1.1e-09 67.8 106 40.6
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.9e-09 67.0 91 48.4
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 2.4e-09 66.6 106 43.4
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 5.4e-09 65.5 102 45.1
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 7.0e-09 65.1 108 45.4
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 1.2e-08 64.3 102 41.2
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 1.2e-08 64.3 102 48.0
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 2.7e-08 63.2 111 41.4
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 2.7e-08 63.2 103 39.8
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 3.5e-08 62.8 100 47.0
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 1.0e-07 61.2 100 44.0
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 1.3e-07 60.8 95 42.1
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 1.7e-07 60.5 90 44.4
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 1.7e-07 60.5 102 43.1
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 2.3e-07 60.1 99 42.4
Oeu035505.1 Olea europaea HOM05D005864 ORTHO05D006770 3.0e-07 59.7 61 55.7
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 6.6e-07 58.5 99 41.4
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 8.6e-07 58.2 104 41.3
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 8.6e-07 58.2 98 42.9
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.9e-06 57.0 93 43.0
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 1.9e-06 57.0 111 38.7
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 4.3e-06 55.8 99 41.4
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 4.3e-06 55.8 99 40.4
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 5.6e-06 55.5 103 41.7


User provided reference genes

Program Settings