Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011176 Camellia sinensis var. sinensis HOM05D006595 ORTHO05D008238 2.7e-81 305.4 175 100.0
Dinv13419 Davidia involucrata HOM05D006595 ORTHO05D008238 1.0e-51 207.2 163 81.6
Ciclev10016858m.g Citrus clementina HOM05D006595 ORTHO05D008238 1.5e-47 193.4 175 72.6
Nn7g35969 Nelumbo nucifera HOM05D006595 ORTHO05D008238 1.3e-46 190.3 174 69.0
Dinv34743 Davidia involucrata HOM05D006595 ORTHO05D008238 3.7e-46 188.7 131 90.8
Potri.001G009800 Populus trichocarpa HOM05D006595 ORTHO05D008238 3.7e-46 188.7 163 75.5
Manes.03G089200 Manihot esculenta HOM05D006595 ORTHO05D008238 4.9e-46 188.3 176 69.9
MD03G1011600 Malus domestica HOM05D006595 ORTHO05D008238 1.1e-45 187.2 159 73.6
Rhsim13G0228400 Rhododendron simsii HOM05D000750 ORTHO05D000714 1.1e-45 187.2 161 77.6
Prupe.6G012000 Prunus persica HOM05D006595 ORTHO05D008238 1.4e-45 186.8 175 69.7
TAR636G1600 Trochodendron aralioides HOM05D006595 ORTHO05D008238 3.1e-45 185.7 181 69.6
Atru.chr3.2190 Acer truncatum HOM05D006595 ORTHO05D008238 4.1e-45 185.3 163 75.5
SalBow6G7140 Salvia bowleyana HOM05D006595 ORTHO05D008238 3.5e-44 182.2 192 63.5
PGSC0003DMG401032143 Solanum tuberosum HOM05D006595 ORTHO05D008238 7.7e-44 181.0 160 74.4
SGA_v2.0_scaffold78G25462 Striga asiatica HOM05D006595 ORTHO05D008238 1.7e-43 179.9 157 73.9
QL01p010272 Quercus lobata HOM05D006595 ORTHO05D008238 2.3e-43 179.5 160 70.6
RcHm_v2.0_Chr5g0081351 Rosa chinensis HOM05D006595 ORTHO05D008238 2.3e-43 179.5 160 73.1
CiPaw.13G171400 Carya illinoinensis HOM05D006595 ORTHO05D008238 3.8e-43 178.7 174 69.0
FAN17G0104 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.0e-43 178.3 160 72.5
Lj2A706G26 Lonicera japonica HOM05D006595 ORTHO05D008238 1.1e-42 177.2 162 73.5
Duzib168G0997 Durio zibethinus HOM05D006595 ORTHO05D008238 1.9e-42 176.4 162 71.6
Gohir.D08G088800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 1.9e-42 176.4 166 66.9
Gorai.007G232900 Gossypium raimondii HOM05D006595 ORTHO05D008238 1.9e-42 176.4 161 69.6
Peaxi162Scf00441g00213 Petunia axillaris HOM05D006595 ORTHO05D008238 1.9e-42 176.4 143 77.6
EL10Ac4g10339 Beta vulgaris HOM05D006595 ORTHO05D008238 2.5e-42 176.0 162 71.0
FAN21G3045 Fragaria x ananassa HOM05D000750 ORTHO05D000714 2.5e-42 176.0 163 71.2
Gohir.A08G079300 Gossypium hirsutum HOM05D006595 ORTHO05D008238 3.3e-42 175.6 168 67.9
Gohir.D11G216800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 3.3e-42 175.6 177 66.1
Sabra01G0007800 Salix brachista HOM05D006595 ORTHO05D008238 3.3e-42 175.6 181 67.4
CANSAT11G0726 Cannabis sativa HOM05D006595 ORTHO05D008238 4.2e-42 175.3 160 67.5
Gohir.A11G206900 Gossypium hirsutum HOM05D006595 ORTHO05D008238 4.2e-42 175.3 177 66.1
Oeu038858.2 Olea europaea HOM05D006595 ORTHO05D008238 5.6e-42 174.9 161 73.9
FvH4_3g44681 Fragaria vesca HOM05D006595 ORTHO05D008238 7.2e-42 174.5 163 70.6
FAN25G3451 Fragaria x ananassa HOM05D000750 ORTHO05D000714 9.5e-42 174.1 163 70.6
GSVIVG01025384001 Vitis vinifera HOM05D006595 ORTHO05D008238 9.5e-42 174.1 164 70.7
Gorai.004G093500 Gossypium raimondii HOM05D006595 ORTHO05D008238 1.2e-41 173.7 168 67.3
MSTRG.8324 Avicennia marina HOM05D006595 ORTHO05D008238 1.6e-41 173.3 173 66.5
Sopen01g002130 Solanum pennellii HOM05D006595 ORTHO05D008238 2.1e-41 172.9 161 72.0
ECA248G3199 Erigeron canadensis HOM05D006595 ORTHO05D008238 3.6e-41 172.2 187 65.2
TWI34G0416 Tripterygium wilfordii HOM05D006595 ORTHO05D008238 3.6e-41 172.2 173 67.6
Haze_22995 Corylus avellana HOM05D006595 ORTHO05D008238 8.0e-41 171.0 159 69.8
Cc01_g00990 Coffea canephora HOM05D006595 ORTHO05D008238 1.0e-40 170.6 131 83.2
Cfa009626 Carpinus fangiana HOM05D006595 ORTHO05D008238 1.4e-40 170.2 160 71.9
AUR62019207 Chenopodium quinoa HOM05D006595 ORTHO05D008238 1.4e-40 170.2 161 69.6
AUR62000037 Chenopodium quinoa HOM05D006595 ORTHO05D008238 2.3e-40 169.5 164 69.5
FAN16G1668 Fragaria x ananassa HOM05D000750 ORTHO05D000714 2.3e-40 169.5 163 69.3
Solyc01g006130.4 Solanum lycopersicum HOM05D006595 ORTHO05D008238 5.2e-40 168.3 156 71.8
CAN.G140.24 Capsicum annuum HOM05D006595 ORTHO05D008238 6.8e-40 167.9 161 70.2
PGR102G3301 Punica granatum HOM05D006595 ORTHO05D008238 8.9e-40 167.5 144 75.7
MSTRG.208 Avicennia marina HOM05D006595 ORTHO05D008238 2.0e-39 166.4 191 61.3
Lj5g0010961 Lotus japonicus HOM05D006595 ORTHO05D008238 2.0e-39 166.4 155 70.3
Migut.F01376 Erythranthe guttata HOM05D006595 ORTHO05D008238 2.6e-39 166.0 162 67.3
Aqoxy2G00094 Aquilegia oxysepala HOM05D006595 ORTHO05D008238 4.4e-39 165.2 180 60.6
Nitab4.5_0001620g0030 Nicotiana tabacum HOM05D006595 ORTHO05D008238 4.4e-39 165.2 171 59.1
CsaV3_4G023550 Cucumis sativus L. HOM05D006595 ORTHO05D008238 1.7e-38 163.3 170 64.1
ClCG02G023820 Citrullus lanatus HOM05D006595 ORTHO05D008238 2.9e-38 162.5 154 68.2
Nitab4.5_0005477g0080 Nicotiana tabacum HOM05D006595 ORTHO05D008238 2.9e-38 162.5 158 61.4
Cpa.g.sc119.91 Carica papaya HOM05D006595 ORTHO05D008238 3.7e-38 162.2 175 66.9
Phvul.007G006200 Phaseolus vulgaris HOM05D006595 ORTHO05D008238 3.7e-38 162.2 156 69.2
Lj2A705G49 Lonicera japonica HOM05D006595 ORTHO05D008238 4.9e-38 161.8 132 66.7
MELO3C014661.2 Cucumis melo HOM05D006595 ORTHO05D008238 1.1e-37 160.6 170 64.7
THA.LOC104815114 Tarenaya hassleriana HOM05D006595 ORTHO05D008238 1.1e-37 160.6 154 69.5
CDE04G0274 Ceratophyllum demersum HOM05D006595 ORTHO05D008238 4.1e-37 158.7 166 65.7
Sed0019652 Sechium edule HOM05D006595 ORTHO05D008238 9.2e-37 157.5 174 62.6
Sp4g17140 Schrenkiella parvula HOM05D006595 ORTHO05D008238 5.9e-36 154.8 182 62.6
Thhalv10017283m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 7.8e-36 154.5 182 63.2
AT2G34860 Arabidopsis thaliana HOM05D006595 ORTHO05D008238 1.0e-35 154.1 182 62.1
Aa31sc409G10 Aethionema arabicum HOM05D006595 ORTHO05D008238 1.3e-35 153.7 157 70.7
Medtr1g116170 Medicago truncatula HOM05D006595 ORTHO05D008238 1.7e-35 153.3 124 80.6
Ah.04g161600 Amaranthus hybridus HOM05D000750 ORTHO05D000714 3.9e-35 152.1 150 69.3
PSO339G5391 Papaver somniferum HOM05D006595 ORTHO05D008238 3.9e-35 152.1 174 59.8
PSO384G3168 Papaver somniferum HOM05D006595 ORTHO05D008238 3.9e-35 152.1 174 60.3
Glyma.10G293900 Glycine max HOM05D006595 ORTHO05D008238 5.0e-35 151.8 161 67.1
BcaC02g07751 Brassica carinata HOM05D006595 ORTHO05D008238 6.6e-35 151.4 147 68.7
BolC4t27880H Brassica oleracea HOM05D006595 ORTHO05D008238 6.6e-35 151.4 147 68.7
Sc16g0012000 Simmondsia chinensis HOM05D006595 ORTHO05D008238 6.6e-35 151.4 160 67.5
BcaC02g11570 Brassica carinata HOM05D006595 ORTHO05D008238 1.1e-34 150.6 154 66.9
Eucgr.B03632 Eucalyptus grandis HOM05D006595 ORTHO05D008238 1.5e-34 150.2 165 66.7
BraA05t20025Z Brassica rapa HOM05D006595 ORTHO05D008238 1.9e-34 149.8 159 66.0
Carub.0004s1654 Capsella rubella HOM05D006595 ORTHO05D008238 1.9e-34 149.8 144 69.4
C04p13910 Brassica napus HOM05D006595 ORTHO05D008238 3.3e-34 149.1 154 67.5
BolC4t22980H Brassica oleracea HOM05D006595 ORTHO05D008238 3.3e-34 149.1 154 67.5
BraA04t18167Z Brassica rapa HOM05D006595 ORTHO05D008238 4.3e-34 148.7 146 69.9
Os08g0463900 Oryza sativa ssp. japonica HOM05D006595 ORTHO05D008238 4.3e-34 148.7 141 68.1
arahy.Tifrunner.gnm1.ann1.ZL64GD Arachis hypogaea HOM05D006595 ORTHO05D008238 5.6e-34 148.3 154 66.9
A04p26620 Brassica napus HOM05D006595 ORTHO05D008238 5.6e-34 148.3 146 69.9
A05p10810 Brassica napus HOM05D006595 ORTHO05D008238 7.3e-34 147.9 150 68.0
C04p64040 Brassica napus HOM05D006595 ORTHO05D008238 9.5e-34 147.5 175 63.4
CARHR129020 Cardamine hirsuta HOM05D006595 ORTHO05D008238 9.5e-34 147.5 179 58.7
BcaB06g28828 Brassica carinata HOM05D006595 ORTHO05D008238 1.6e-33 146.7 144 70.8
COL.COLO4_10447 Corchorus olitorius HOM05D006595 ORTHO05D008238 1.6e-33 146.7 195 46.7
HPP92_016182 Vanilla planifolia HOM05D006595 ORTHO05D008238 2.1e-33 146.4 157 65.6
Psat6g238960 Pisum sativum HOM05D006595 ORTHO05D008238 1.8e-32 143.3 171 60.2
HPP92_026734 Vanilla planifolia HOM05D006595 ORTHO05D008238 1.8e-32 143.3 162 65.4
TPR.G10430 Trifolium pratense HOM05D006595 ORTHO05D008238 5.2e-32 141.7 125 76.8
Ca_11377_v3 Cicer arietinum L. HOM05D001261 ORTHO05D001130 6.8e-32 141.4 124 75.0
vmacro04249 Vaccinium macrocarpon HOM05D006595 ORTHO05D008238 8.9e-32 141.0 305 38.0
Hund06674 Selenicereus undatus HOM05D006595 ORTHO05D008238 1.5e-31 140.2 126 74.6
Thecc.09G215500 Theobroma cacao HOM05D006595 ORTHO05D008238 9.8e-31 137.5 128 59.4
Lalb_Chr02g0143771 Lupinus albus HOM05D006595 ORTHO05D008238 2.9e-30 136.0 154 61.0
ATR1149G131 Amborella trichopoda HOM05D006595 ORTHO05D008238 4.9e-30 135.2 89 92.1
Glyma.20G243800 Glycine max HOM05D006595 ORTHO05D008238 4.9e-30 135.2 100 81.0
Lsat_1_v5_gn_1_68280 Lactuca sativa HOM05D006595 ORTHO05D008238 3.2e-29 132.5 152 54.6
arahy.Tifrunner.gnm1.ann1.SSSL8J Arachis hypogaea HOM05D006595 ORTHO05D008238 1.6e-28 130.2 146 64.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 6.0e-28 128.3 144 62.5
unitig_747.g21415 Utricularia gibba HOM05D006595 ORTHO05D008238 1.0e-27 127.5 125 71.2
HanXRQChr11g0344931 Helianthus annuus HOM05D006595 ORTHO05D008238 1.3e-27 127.1 143 54.5
SEGI_11759 Sequoiadendron giganteum HOM05D006595 ORTHO05D008238 5.0e-27 125.2 135 64.4
Mapoly0120s0023 Marchantia polymorpha HOM05D006595 ORTHO05D008238 3.6e-25 119.0 126 64.3
QL01p010258 Quercus lobata HOM05D006595 ORTHO05D008238 4.0e-24 115.5 104 57.7
QL08p062509 Quercus lobata HOM05D006595 ORTHO05D008238 4.0e-24 115.5 104 57.7
Pp3c3_12490 Physcomitrium patens HOM05D006595 ORTHO05D008238 8.9e-24 114.4 152 55.3
SMO331G0037 Selaginella moellendorffii HOM05D006595 ORTHO05D008238 8.9e-24 114.4 112 69.6
MD11G1014500 Malus domestica HOM05D006595 ORTHO05D008238 7.5e-23 111.3 76 71.1
AL4G30870 Arabidopsis lyrata HOM05D006595 ORTHO05D008238 1.3e-22 110.5 146 47.9
CBR_g22940 Chara braunii HOM05D006595 ORTHO05D008238 3.7e-22 109.0 122 60.7
FAN11G2269 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.4e-21 107.1 76 68.4
VMungo0720G3035 Vigna mungo HOM05D006595 ORTHO05D008238 1.4e-21 107.1 80 65.0
FAN16G0514 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.1e-21 105.5 74 67.6
FvH4_3g44571 Fragaria vesca HOM05D006595 ORTHO05D008238 2.7e-20 102.8 74 66.2
PRCOL_00006415 Prasinoderma coloniale HOM05D006595 ORTHO05D008238 2.1e-17 93.2 103 62.1
Cre11.g475850 Chlamydomonas reinhardtii HOM05D006595 ORTHO05D008238 8.9e-16 87.8 114 45.6
MCO03G122 Micromonas commoda HOM05D006595 ORTHO05D008238 1.3e-14 84.0 109 56.0
BcaC07g42181 Brassica carinata HOM05D006595 ORTHO05D008238 1.7e-14 83.6 127 45.7
Thhalv10012349m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 1.2e-12 77.4 61 65.6
BcaB01g02723 Brassica carinata HOM05D006595 ORTHO05D008238 2.7e-12 76.3 106 46.2
BcaB06g29011 Brassica carinata HOM05D006595 ORTHO05D008238 2.3e-11 73.2 80 55.0
BcaB01g03109 Brassica carinata HOM05D006595 ORTHO05D008238 4.7e-09 65.5 85 45.9
Pp3c4_29200 Physcomitrium patens HOM05D006595 ORTHO05D008238 2.6e-07 59.7 106 34.0
FAN21G2764 Fragaria x ananassa HOM05D006595 ORTHO05D008238 2.9e-06 56.2 30 83.3


User provided reference genes

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