Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.8e-58 227.6 141 100.0
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.8e-58 227.6 141 100.0
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.2e-10 70.5 71 56.3
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.9e-10 68.2 123 47.2
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.0e-09 67.4 132 47.7
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 2.2e-09 66.2 56 57.1
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.5e-09 64.3 70 51.4
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-08 63.2 56 55.4
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.2e-08 62.0 66 51.5
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.2e-08 61.2 70 48.6
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 9.4e-08 60.8 121 51.2
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-07 60.5 74 44.6
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-07 60.5 48 58.3
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.1e-07 59.7 70 45.7
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.1e-07 59.7 67 41.8
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.1e-07 59.7 74 44.6
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-07 59.3 54 53.7
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-06 57.0 72 47.2
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.4e-06 57.0 74 45.9
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.3e-06 56.2 67 38.8
CSS0014258 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.0e-06 55.8 74 40.5
CSS0020249 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.0e-06 55.8 74 40.5
CSS0020818 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.0e-06 55.8 74 40.5
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.0e-06 55.8 72 41.7
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 4.0e-06 55.5 67 38.8
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 4.0e-06 55.5 67 38.8
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.2e-06 55.1 51 52.9
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 5.2e-06 55.1 70 42.9
CSS0015949 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.7e-06 54.7 74 40.5
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 6.7e-06 54.7 72 45.8
CSS0008322 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 8.8e-06 54.3 74 39.2
CSS0033294 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 8.8e-06 54.3 67 38.8
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 8.8e-06 54.3 74 44.6


User provided reference genes

Program Settings