Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 4.3e-113 411.4 214 100.0
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.6e-110 402.1 215 98.6
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 8.7e-90 334.0 221 77.4
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 4.3e-89 331.6 229 79.9
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 5.5e-76 288.1 203 75.9
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 1.2e-75 287.0 152 89.5
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 1.8e-74 283.1 222 67.1
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 3.9e-74 282.0 163 80.4
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 8.8e-74 280.8 163 80.4
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 8.8e-74 280.8 163 79.8
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 1.1e-73 280.4 227 63.9
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 4.4e-73 278.5 224 66.1
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 8.2e-72 274.2 221 65.6
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 1.8e-71 273.1 228 63.6
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 2.4e-71 272.7 163 77.9
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 3.1e-71 272.3 221 65.6
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 9.1e-71 270.8 223 65.5
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 1.2e-70 270.4 220 65.0
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 1.6e-70 270.0 224 64.7
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 2.0e-70 269.6 168 78.0
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 2.0e-70 269.6 228 62.7
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 4.5e-70 268.5 221 64.7
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 5.9e-70 268.1 163 75.5
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 7.7e-70 267.7 221 63.8
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 7.7e-70 267.7 168 76.2
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 1.0e-69 267.3 168 76.2
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.3e-69 266.9 223 64.1
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 1.7e-69 266.5 168 78.6
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 2.2e-69 266.2 166 76.5
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 2.2e-69 266.2 165 75.2
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 2.2e-69 266.2 226 63.3
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 2.9e-69 265.8 168 75.6
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 2.9e-69 265.8 168 77.4
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 2.9e-69 265.8 224 64.7
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 2.9e-69 265.8 165 74.5
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 3.8e-69 265.4 221 63.8
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 6.5e-69 264.6 165 72.7
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 6.5e-69 264.6 168 75.6
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 8.5e-69 264.2 168 75.6
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.1e-68 263.8 222 62.2
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 1.5e-68 263.5 219 60.7
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 1.5e-68 263.5 168 74.4
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 2.5e-68 262.7 164 76.8
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 2.5e-68 262.7 165 73.9
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 2.5e-68 262.7 227 62.1
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 3.2e-68 262.3 168 75.0
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.2e-68 262.3 223 62.3
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 4.2e-68 261.9 168 75.0
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 5.5e-68 261.5 206 68.4
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 5.5e-68 261.5 226 63.7
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.5e-68 261.5 218 62.8
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 7.2e-68 261.2 166 76.5
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 1.2e-67 260.4 165 73.3
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 2.1e-67 259.6 168 75.0
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 4.7e-67 258.5 165 76.4
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 6.1e-67 258.1 234 61.5
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 6.1e-67 258.1 165 75.8
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 8.0e-67 257.7 177 71.2
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 1.0e-66 257.3 223 62.3
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 2.3e-66 256.1 165 73.3
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 4.0e-66 255.4 219 61.6
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 4.0e-66 255.4 165 74.5
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 5.2e-66 255.0 165 71.5
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 1.1e-65 253.8 168 72.0
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 2.0e-65 253.1 162 72.8
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 3.3e-65 252.3 153 81.0
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 3.3e-65 252.3 168 71.4
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 3.3e-65 252.3 168 72.0
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 5.7e-65 251.5 165 72.1
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 2.8e-64 249.2 157 77.1
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 2.8e-64 249.2 206 62.1
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 1.1e-63 247.3 165 76.4
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 1.1e-63 247.3 165 76.4
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 1.1e-63 247.3 201 62.7
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 1.4e-63 246.9 165 76.4
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 1.8e-63 246.5 165 76.4
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 2.4e-63 246.1 219 64.4
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 2.4e-63 246.1 163 71.2
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 3.1e-63 245.7 147 81.6
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 4.1e-63 245.4 165 75.8
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 4.1e-63 245.4 165 75.8
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 5.3e-63 245.0 221 61.5
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 9.1e-63 244.2 165 75.8
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 9.1e-63 244.2 221 62.0
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 1.6e-62 243.4 167 67.1
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 3.5e-62 242.3 165 74.5
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 1.3e-61 240.4 218 62.8
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 2.9e-61 239.2 219 61.2
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 8.5e-61 237.7 163 66.9
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 1.5e-60 236.9 155 72.9
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 4.2e-60 235.3 167 67.1
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 4.2e-60 235.3 224 59.4
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.6e-59 233.4 151 74.8
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 2.7e-59 232.6 156 71.2
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 3.1e-55 219.2 163 64.4
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 4.1e-55 218.8 167 66.5
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 5.0e-53 211.8 151 65.6
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 1.5e-52 210.3 160 60.6
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 1.4e-50 203.8 160 60.6
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 2.0e-49 199.9 168 60.1
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 2.2e-48 196.4 177 60.5
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 3.7e-48 195.7 165 60.0
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 1.4e-47 193.7 168 58.3
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 9.2e-47 191.0 210 51.9
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 1.3e-45 187.2 110 80.9
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 8.6e-45 184.5 193 51.8
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 1.2e-43 180.6 157 58.0
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 4.7e-43 178.7 108 76.9
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 4.9e-40 168.7 154 60.4
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 5.4e-39 165.2 113 73.5
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 7.0e-39 164.9 169 55.6
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 9.2e-39 164.5 165 50.9
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.3e-34 149.8 95 78.9
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 2.0e-33 146.7 105 65.7
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 6.0e-30 135.2 95 67.4
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 7.8e-30 134.8 109 56.9
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 1.1e-28 131.0 173 42.8
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.5e-28 130.6 79 68.4
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 2.5e-28 129.8 83 72.3
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.2e-27 127.5 76 80.3
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 2.8e-27 126.3 83 71.1
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 3.1e-26 122.9 143 53.1
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 7.5e-25 118.2 90 64.4
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 1.1e-23 114.4 90 62.2
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 6.0e-22 108.6 55 87.3
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 1.2e-19 100.9 69 68.1
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 5.8e-17 92.0 53 79.2
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 7.1e-15 85.1 53 71.7
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 6.6e-13 78.6 54 64.8
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 2.4e-10 70.1 53 60.4
Gorai.004G161600 Gossypium raimondii HOM05D006036 ORTHO05D007736 3.4e-09 66.2 67 56.7
Pp3c13_20640 Physcomitrium patens HOM05D020894 ORTHO05D021334 1.2e-06 57.8 147 32.7


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