Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.1e-63 244.6 125 100.0
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.5e-52 208.8 151 74.8
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.8e-50 202.6 144 77.8
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 3.2e-44 181.8 151 63.6
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 7.5e-41 170.6 151 64.2
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 2.7e-38 162.2 114 69.3
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 3.5e-38 161.8 151 58.9
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 4.2e-36 154.8 106 71.7
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 2.8e-35 152.1 151 56.3
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 1.2e-33 146.7 151 51.7
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 2.0e-33 146.0 101 69.3
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 2.0e-33 146.0 144 50.7
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 2.6e-33 145.6 151 53.6
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 3.4e-33 145.2 144 54.2
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 4.4e-33 144.8 150 52.0
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 2.2e-32 142.5 144 50.0
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 2.2e-32 142.5 144 50.0
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 8.3e-32 140.6 152 52.6
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 1.1e-31 140.2 101 62.4
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 4.1e-31 138.3 144 53.5
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 7.0e-31 137.5 151 49.7
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 9.2e-31 137.1 107 65.4
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 1.2e-30 136.7 152 51.3
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 3.5e-30 135.2 153 50.3
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 3.5e-30 135.2 103 62.1
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 4.5e-30 134.8 144 51.4
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 5.9e-30 134.4 101 61.4
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 1.0e-29 133.7 152 48.7
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.0e-29 133.7 152 48.7
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.0e-29 133.7 152 48.7
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 1.3e-29 133.3 146 50.7
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 1.7e-29 132.9 108 58.3
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 5.0e-29 131.3 151 46.4
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 8.6e-29 130.6 144 48.6
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 8.6e-29 130.6 152 47.4
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 8.6e-29 130.6 152 50.0
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 2.5e-28 129.0 98 63.3
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.5e-28 129.0 145 49.0
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 3.3e-28 128.6 108 57.4
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 4.3e-28 128.3 144 48.6
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 5.6e-28 127.9 151 45.0
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 5.6e-28 127.9 152 48.0
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 2.1e-27 125.9 101 58.4
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.1e-27 125.9 103 56.3
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.1e-27 125.9 103 56.3
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 6.1e-27 124.4 109 57.8
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 8.0e-27 124.0 101 59.4
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 8.0e-27 124.0 151 45.0
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.0e-26 123.6 146 47.3
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 1.0e-26 123.6 146 46.6
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 5.2e-26 121.3 108 54.6
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 6.8e-26 120.9 151 43.7
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 6.8e-26 120.9 151 44.4
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 1.2e-25 120.2 151 45.7
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 1.5e-25 119.8 144 43.8
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 2.6e-25 119.0 108 52.8
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 3.4e-25 118.6 144 43.8
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 3.4e-25 118.6 108 50.9
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 3.4e-25 118.6 103 55.3
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 5.8e-25 117.9 147 45.6
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 5.8e-25 117.9 144 43.1
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 1.3e-24 116.7 151 45.0
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 1.3e-24 116.7 98 59.2
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 1.7e-24 116.3 151 43.0
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 2.2e-24 115.9 101 55.4
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 2.9e-24 115.5 144 45.8
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 2.9e-24 115.5 151 43.0
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.9e-24 115.5 108 50.0
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 3.7e-24 115.2 151 42.4
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 4.9e-24 114.8 151 43.0
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 4.9e-24 114.8 108 50.9
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 4.9e-24 114.8 98 54.1
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 8.3e-24 114.0 144 42.4
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 1.1e-23 113.6 151 42.4
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 1.1e-23 113.6 100 51.0
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 1.4e-23 113.2 151 43.7
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 5.4e-23 111.3 144 40.3
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 5.4e-23 111.3 151 41.1
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 5.4e-23 111.3 114 46.5
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 7.0e-23 110.9 144 44.4
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 7.0e-23 110.9 151 41.7
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 9.2e-23 110.5 144 40.3
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 9.2e-23 110.5 114 46.5
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 1.6e-22 109.8 108 50.0
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 6.0e-22 107.8 107 52.3
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 1.0e-21 107.1 144 39.6
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 1.0e-21 107.1 145 40.7
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 1.0e-21 107.1 146 43.2
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 1.3e-21 106.7 144 39.6
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 1.7e-21 106.3 190 35.8
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 1.7e-21 106.3 151 41.1
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 2.3e-21 105.9 151 40.4
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 8.6e-21 104.0 101 54.5
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 8.6e-21 104.0 98 48.0
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 8.6e-21 104.0 100 51.0
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 1.9e-20 102.8 145 37.2
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 3.6e-19 98.6 151 35.1
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 1.8e-18 96.3 147 39.5
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 2.3e-18 95.9 147 38.8
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 8.9e-18 94.0 128 43.8
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 1.2e-17 93.6 123 45.5
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 5.8e-17 91.3 91 51.6
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 7.5e-17 90.9 114 43.9
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 9.8e-17 90.5 98 46.9
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 6.4e-16 87.8 107 38.3
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.1e-15 87.0 63 63.5
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 1.9e-15 86.3 60 66.7
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.9e-15 86.3 69 58.0
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 2.4e-15 85.9 95 45.3
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 3.2e-15 85.5 67 56.7
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 2.5e-12 75.9 141 33.3
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 3.3e-12 75.5 48 70.8
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 1.2e-11 73.6 100 43.0
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 1.6e-11 73.2 103 37.9
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 2.1e-11 72.8 51 62.7
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 4.0e-10 68.6 41 78.0
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 6.8e-10 67.8 91 41.8
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 8.9e-10 67.4 66 51.5
FvH4_6g22960 Fragaria vesca HOM05D006640 ORTHO05D008078 1.9e-07 59.7 55 56.4
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 5.4e-07 58.2 109 32.1
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 3.5e-06 55.5 93 30.1


User provided reference genes

Program Settings