Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 3.3e-147 525.0 266 100.0
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.4e-137 492.3 254 99.2
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 2.7e-133 478.8 267 90.6
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.3e-132 475.7 267 89.5
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.0e-131 472.6 267 89.1
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 5.7e-131 471.1 266 89.1
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.3e-130 469.9 268 89.9
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 1.7e-130 469.5 267 88.0
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 8.2e-130 467.2 267 88.4
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 5.3e-129 464.5 267 88.0
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 1.2e-128 463.4 266 86.8
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 1.2e-128 463.4 267 86.5
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 1.6e-128 463.0 267 87.6
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 3.5e-128 461.8 266 86.8
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 5.9e-128 461.1 267 86.9
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 7.7e-128 460.7 268 88.1
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 7.7e-128 460.7 267 87.6
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 1.0e-127 460.3 266 86.5
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 3.8e-127 458.4 267 86.9
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 3.8e-127 458.4 266 87.2
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 5.0e-127 458.0 267 86.9
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 1.1e-126 456.8 267 86.5
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 2.7e-125 452.2 267 85.4
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 3.6e-125 451.8 264 87.1
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 6.1e-125 451.1 268 86.2
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 6.1e-125 451.1 263 84.8
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 6.1e-125 451.1 264 86.7
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 8.0e-125 450.7 267 85.0
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 8.0e-125 450.7 315 76.5
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.0e-124 450.3 266 86.5
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 1.8e-124 449.5 263 84.8
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 8.8e-124 447.2 267 85.4
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 2.0e-123 446.0 266 86.1
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 2.0e-123 446.0 266 84.6
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.6e-123 445.7 264 84.1
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 2.6e-123 445.7 262 85.1
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 3.3e-123 445.3 262 85.1
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.3e-122 443.4 267 84.6
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 1.3e-122 443.4 267 84.6
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.7e-122 443.0 264 83.7
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.7e-122 443.0 268 85.8
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.2e-122 442.6 266 84.2
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 2.2e-122 442.6 267 82.8
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 2.2e-122 442.6 259 85.7
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 2.8e-122 442.2 267 85.0
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.8e-122 442.2 267 84.3
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 2.8e-122 442.2 262 84.4
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 3.7e-122 441.8 267 83.9
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 8.2e-122 440.7 267 83.5
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 8.2e-122 440.7 266 85.3
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 1.8e-121 439.5 274 82.8
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 4.1e-121 438.3 268 84.0
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 5.3e-121 438.0 266 83.1
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 5.3e-121 438.0 274 83.6
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 7.0e-121 437.6 265 83.8
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 9.1e-121 437.2 266 80.8
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.2e-120 436.8 269 81.4
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 1.6e-120 436.4 267 84.3
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 3.5e-120 435.3 266 84.6
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 3.5e-120 435.3 267 84.6
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 3.5e-120 435.3 268 84.3
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 4.5e-120 434.9 267 83.1
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 7.7e-120 434.1 270 83.3
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 1.0e-119 433.7 267 82.4
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 2.2e-119 432.6 266 82.0
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 2.2e-119 432.6 267 83.1
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 3.8e-119 431.8 267 83.5
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 6.5e-119 431.0 259 83.4
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.5e-118 429.1 262 83.2
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 2.5e-118 429.1 267 82.4
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 3.2e-118 428.7 260 83.5
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.6e-117 426.4 266 80.8
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.1e-117 426.0 268 81.0
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.7e-117 425.6 266 81.6
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 4.7e-117 424.9 293 75.8
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 6.1e-117 424.5 263 80.6
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 6.1e-117 424.5 266 81.2
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 6.1e-117 424.5 263 81.0
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.4e-116 423.3 254 84.6
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 6.8e-116 421.0 290 76.9
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 6.8e-116 421.0 250 84.0
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 1.2e-115 420.2 261 82.4
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.5e-115 419.9 250 84.8
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.0e-115 419.5 266 81.2
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 3.4e-115 418.7 263 79.5
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 5.7e-115 417.9 250 83.2
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 8.3e-114 414.1 267 79.4
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 4.1e-113 411.8 319 70.8
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 7.7e-112 407.5 266 78.6
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 1.3e-111 406.8 254 81.1
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 1.7e-111 406.4 308 71.8
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 2.2e-111 406.0 261 79.7
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.9e-111 405.6 263 77.9
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 5.0e-111 404.8 266 77.8
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 6.5e-111 404.4 238 84.5
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 1.5e-110 403.3 262 79.0
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 9.5e-110 400.6 259 79.5
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 2.8e-109 399.1 283 76.0
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 2.3e-108 396.0 271 76.4
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 2.3e-108 396.0 269 76.2
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 4.0e-108 395.2 280 75.4
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 8.8e-108 394.0 265 77.4
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.2e-106 389.4 249 79.5
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 5.4e-105 384.8 256 78.9
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 1.6e-104 383.3 259 76.8
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 3.5e-104 382.1 268 74.3
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 4.5e-104 381.7 275 74.5
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 1.0e-103 380.6 268 73.1
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 2.9e-103 379.0 257 74.7
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 2.9e-103 379.0 257 74.7
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 3.8e-103 378.6 252 78.6
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 1.2e-101 373.6 264 72.0
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 2.1e-101 372.9 265 71.7
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 2.0e-99 366.3 264 72.0
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.6e-99 365.9 225 82.2
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.3e-98 363.6 261 70.9
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 4.9e-98 361.7 261 70.9
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.1e-97 360.5 261 70.1
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 1.4e-97 360.1 257 73.2
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.8e-97 359.8 261 70.5
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 1.8e-97 359.8 235 77.9
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 3.2e-97 359.0 261 71.3
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 3.2e-97 359.0 261 71.3
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 4.1e-97 358.6 266 73.3
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 4.1e-97 358.6 268 72.0
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 5.4e-97 358.2 261 71.6
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 7.0e-97 357.8 262 71.4
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 7.0e-97 357.8 261 70.5
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 2.0e-96 356.3 261 70.5
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 2.7e-96 355.9 262 71.0
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 1.0e-95 354.0 259 70.7
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 1.0e-95 354.0 261 69.7
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 3.0e-95 352.4 257 72.4
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 1.1e-94 350.5 280 67.1
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 2.5e-94 349.4 261 71.6
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 5.6e-94 348.2 261 71.3
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 7.3e-94 347.8 261 69.7
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 8.9e-92 340.9 253 70.4
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 2.7e-88 329.3 199 84.9
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 3.5e-88 328.9 206 83.5
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 2.3e-87 326.2 260 66.9
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 5.6e-86 321.6 197 82.7
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 1.6e-85 320.1 263 62.7
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 6.8e-84 314.7 265 63.8
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 4.4e-83 312.0 261 62.8
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 4.1e-81 305.4 240 68.8
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 9.2e-81 304.3 265 61.9
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 8.6e-79 297.7 262 61.8
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 1.1e-78 297.4 261 60.9
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 7.6e-75 284.6 189 78.8
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 8.6e-71 271.2 174 78.2
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 3.3e-70 269.2 144 92.4
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.2e-43 181.0 121 78.5
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 2.0e-43 180.3 212 50.9
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 2.7e-40 169.9 241 43.6
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 8.7e-39 164.9 105 78.1
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 1.1e-38 164.5 148 58.8
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 8.2e-37 158.3 284 37.7
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 3.0e-31 139.8 93 76.3
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 6.7e-31 138.7 74 95.9
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.3e-26 124.4 89 73.0
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-25 119.0 226 39.8
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 3.4e-19 99.8 157 40.8
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.1e-17 94.7 92 56.5
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 2.7e-16 90.1 117 41.9
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 4.8e-13 79.3 64 65.6
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 1.4e-12 77.8 123 45.5
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.8e-12 77.4 41 82.9
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 3.1e-12 76.6 41 80.5
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 2.9e-10 70.1 43 69.8
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 1.6e-08 64.3 138 34.1
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 6.7e-07 58.9 86 34.9


User provided reference genes

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