Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 5.4e-53 211.1 135 100.0
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 1.2e-36 156.8 82 82.9
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 7.8e-36 154.1 84 84.5
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 1.0e-35 153.7 82 81.7
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.0e-35 153.7 81 82.7
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.3e-35 152.5 76 86.8
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 2.3e-35 152.5 79 84.8
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 2.3e-35 152.5 76 85.5
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 3.0e-35 152.1 80 82.5
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 3.9e-35 151.8 79 82.3
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 5.1e-35 151.4 76 85.5
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.5e-34 149.8 80 80.0
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 3.3e-34 148.7 79 81.0
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 5.6e-34 147.9 73 86.3
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 5.6e-34 147.9 76 82.9
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 9.6e-34 147.1 81 80.2
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.2e-33 146.7 83 79.5
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.2e-33 146.7 78 78.2
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.6e-33 146.4 76 80.3
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.6e-33 146.4 78 79.5
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.8e-33 145.6 80 81.2
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 2.8e-33 145.6 80 81.2
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.8e-33 145.6 74 82.4
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 3.6e-33 145.2 76 78.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 4.7e-33 144.8 76 81.6
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 6.2e-33 144.4 83 79.5
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 6.2e-33 144.4 78 78.2
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 6.2e-33 144.4 79 81.0
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 8.1e-33 144.1 81 80.2
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 8.1e-33 144.1 78 79.5
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.1e-32 143.7 83 73.5
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.4e-32 143.3 76 80.3
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.8e-32 142.9 76 82.9
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 2.4e-32 142.5 81 75.3
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 2.4e-32 142.5 78 76.9
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 4.0e-32 141.7 78 76.9
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 5.2e-32 141.4 76 78.9
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 6.9e-32 141.0 137 62.8
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 8.9e-32 140.6 78 76.9
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 1.2e-31 140.2 78 75.6
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 3.4e-31 138.7 81 70.4
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 9.9e-31 137.1 83 78.3
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.3e-30 136.7 79 77.2
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 2.2e-30 136.0 90 71.1
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 2.9e-30 135.6 67 85.1
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 2.9e-30 135.6 67 85.1
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.4e-29 132.5 63 87.3
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.4e-29 132.5 63 87.3
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 7.1e-29 131.0 83 72.3
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 2.7e-28 129.0 84 66.7
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 7.8e-28 127.5 84 72.6
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 1.9e-26 122.9 68 75.0
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 1.6e-25 119.8 81 65.4
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.6e-25 119.8 81 65.4
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.1e-25 119.4 84 61.9
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 2.8e-25 119.0 70 71.4
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 4.8e-25 118.2 76 69.7
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 2.4e-24 115.9 80 67.5
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 9.0e-24 114.0 83 61.4
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 2.0e-23 112.8 76 68.4
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.3e-22 110.2 81 66.7
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 1.3e-22 110.2 52 88.5
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 6.4e-22 107.8 78 64.1
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 2.7e-20 102.4 78 62.8
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 3.5e-20 102.1 77 62.3
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 4.6e-20 101.7 82 62.2
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.3e-19 100.1 80 60.0
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.3e-19 100.1 45 95.6
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 3.0e-19 99.0 84 57.1
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 5.6e-18 94.7 46 89.1
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.3e-17 93.6 80 60.0
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.6e-17 93.2 84 57.1
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 1.6e-17 93.2 66 66.7
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 2.1e-17 92.8 68 58.8
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 8.1e-17 90.9 50 78.0
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 4.0e-16 88.6 66 62.1
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 5.8e-15 84.7 63 60.3
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 7.6e-15 84.3 65 61.5
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 9.9e-15 84.0 47 72.3
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.7e-14 83.2 48 75.0
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 5.1e-11 71.6 37 78.4
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 5.3e-08 61.6 30 83.3


User provided reference genes

Program Settings