Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011077 Camellia sinensis var. sinensis HOM05D056592 ORTHO05D000034 6.0e-178 627.5 326 100.0
CSS0043721 Camellia sinensis var. sinensis HOM05D056592 ORTHO05D109407 4.1e-70 269.2 171 83.0
CSS0039284 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.9e-13 79.0 86 51.2
CSS0035830 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.3e-12 77.4 51 70.6
CSS0043586 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.3e-12 77.4 51 72.5
CSS0029707 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.1e-12 76.3 99 46.5
Ca_23998_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-11 74.7 135 39.3
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.5e-11 74.7 137 36.5
CSS0014270 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.0e-11 74.3 81 48.1
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.7e-10 71.2 137 35.0
CSS0024582 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.8e-10 70.5 51 68.6
CiPaw.02G045600 Carya illinoinensis HOM05D000004 ORTHO05D000224 4.8e-10 69.7 102 35.3
QL03p042692 Quercus lobata HOM05D000004 ORTHO05D000002 6.3e-10 69.3 111 37.8
Ca_06875_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.1e-09 68.6 133 36.1
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 1.4e-09 68.2 80 42.5
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 3.1e-09 67.0 80 41.2
vmacro21906 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 4.1e-09 66.6 91 35.2
Hund30849 Selenicereus undatus HOM05D000004 ORTHO05D000224 5.3e-09 66.2 116 37.1
CiPaw.05G010700 Carya illinoinensis HOM05D000004 ORTHO05D000034 7.0e-09 65.9 102 32.4
CiPaw.14G122600 Carya illinoinensis HOM05D000004 ORTHO05D000224 9.1e-09 65.5 102 32.4
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-08 64.7 91 38.5
QL05p075262 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-08 64.7 140 32.9
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.0e-08 64.3 91 38.5
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.0e-08 64.3 111 36.0
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.0e-08 64.3 95 38.9
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-08 63.9 91 38.5
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 2.6e-08 63.9 80 40.0
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-08 63.9 118 31.4
CANSAT11G1416 Cannabis sativa HOM05D000004 ORTHO05D000034 3.4e-08 63.5 94 35.1
CiPaw.03G177700 Carya illinoinensis HOM05D000004 ORTHO05D000224 3.4e-08 63.5 102 32.4
FvH4_4g16178 Fragaria vesca HOM05D000004 ORTHO05D000224 3.4e-08 63.5 140 32.9
QL08p035596 Quercus lobata HOM05D000004 ORTHO05D000002 3.4e-08 63.5 130 36.2
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-08 63.2 91 37.4
Rhsim06G0111500 Rhododendron simsii HOM05D000002 ORTHO05D000047 4.5e-08 63.2 114 32.5
Rhsim08G0057000 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.5e-08 63.2 114 32.5
FvH4_3g19661 Fragaria vesca HOM05D000004 ORTHO05D000224 5.9e-08 62.8 128 29.7
QL09p028348 Quercus lobata HOM05D000004 ORTHO05D000002 5.9e-08 62.8 110 34.5
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 7.7e-08 62.4 131 29.0
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 7.7e-08 62.4 131 29.0
CSS0033312 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.0e-07 62.0 50 54.0
CSS0034255 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.0e-07 62.0 50 54.0
Rhsim10G0111100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.0e-07 62.0 114 32.5
Rhsim10G0111300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.0e-07 62.0 114 32.5
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.7e-07 61.2 131 29.0
Ah.13g066790 Amaranthus hybridus HOM05D000004 ORTHO05D000224 2.2e-07 60.8 130 33.1
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.2e-07 60.8 131 28.2
QL11p016154 Quercus lobata HOM05D000567 ORTHO05D000224 2.2e-07 60.8 84 36.9
Ah.09g235450 Amaranthus hybridus HOM05D000004 ORTHO05D000034 2.9e-07 60.5 105 37.1
TWI63G1549 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 2.9e-07 60.5 147 31.3
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-07 60.1 91 36.3
CSS0045547 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.8e-07 60.1 50 56.0
FvH4_7g04361 Fragaria vesca HOM05D000004 ORTHO05D000224 3.8e-07 60.1 87 36.8
QL93p2008_0037 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-07 60.1 110 32.7
CSS0006021 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.0e-07 59.7 50 58.0
CSS0010289 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.0e-07 59.7 50 52.0
CSS0014020 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.0e-07 59.7 50 58.0
Haze_01589 Corylus avellana HOM05D014948 ORTHO05D000034 5.0e-07 59.7 89 36.0
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.0e-07 59.7 91 34.1
QL10p047797 Quercus lobata HOM05D000047 ORTHO05D000044 5.0e-07 59.7 52 50.0
Rhsim07G0101500 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.0e-07 59.7 128 30.5
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-07 59.3 91 36.3
CSS0002461 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.5e-07 59.3 50 56.0
CSS0012345 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.5e-07 59.3 47 53.2
CSS0015439 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.5e-07 59.3 50 56.0
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-07 59.3 89 37.1
Hma1.2p1_0866F.1_g230150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 6.5e-07 59.3 84 32.1
Oeu016951.1 Olea europaea HOM05D000004 ORTHO05D000034 6.5e-07 59.3 80 35.0
QL05p006227 Quercus lobata HOM05D000004 ORTHO05D000002 6.5e-07 59.3 110 33.6
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 8.5e-07 58.9 90 35.6
PSO782G1981 Papaver somniferum HOM05D000004 ORTHO05D000002 8.5e-07 58.9 86 37.2
CSS0005854 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.1e-06 58.5 50 56.0
AUR62001774 Chenopodium quinoa HOM05D000659 ORTHO05D000505 1.1e-06 58.5 84 34.5
FvH4_2g11454 Fragaria vesca HOM05D000004 ORTHO05D000034 1.1e-06 58.5 140 31.4
MD02G1270200 Malus domestica HOM05D000004 ORTHO05D000034 1.1e-06 58.5 102 32.4
Oeu007271.1 Olea europaea HOM05D000004 ORTHO05D000034 1.1e-06 58.5 66 40.9
PSO339G2453 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 58.5 65 44.6
Rhsim02G0129900 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.1e-06 58.5 124 31.5
Ah.05g172160 Amaranthus hybridus HOM05D000004 ORTHO05D000224 1.4e-06 58.2 93 37.6
CSS0040191 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.4e-06 58.2 42 64.3
CANSAT11G2013 Cannabis sativa HOM05D000004 ORTHO05D000034 1.4e-06 58.2 150 31.3
CANSAT54G2641 Cannabis sativa HOM05D000004 ORTHO05D000034 1.4e-06 58.2 94 33.0
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.4e-06 58.2 50 54.0
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 1.4e-06 58.2 166 28.9
CSS0015707 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.9e-06 57.8 50 54.0
CSS0017015 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.9e-06 57.8 63 44.4
CSS0024428 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.9e-06 57.8 50 50.0
FvH4_7g02962 Fragaria vesca HOM05D000004 ORTHO05D000034 1.9e-06 57.8 128 28.9
Nitab4.5_0003336g0070 Nicotiana tabacum HOM05D015050 ORTHO05D017083 1.9e-06 57.8 105 32.4
Oeu042996.1 Olea europaea HOM05D000004 ORTHO05D000034 1.9e-06 57.8 80 35.0
TWI38G1675 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.9e-06 57.8 80 38.8
TWI81G0360 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.9e-06 57.8 50 54.0
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.9e-06 57.8 134 31.3
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.5e-06 57.4 99 34.3
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-06 57.4 133 30.8
CSS0049046 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.5e-06 57.4 50 48.0
CANSAT54G2224 Cannabis sativa HOM05D000004 ORTHO05D000034 2.5e-06 57.4 94 31.9
Oeu036360.1 Olea europaea HOM05D000004 ORTHO05D000224 2.5e-06 57.4 80 35.0
PSO170G4924 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-06 57.4 149 28.2
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 2.5e-06 57.4 134 30.6
QL02p050943 Quercus lobata HOM05D000004 ORTHO05D000002 2.5e-06 57.4 95 32.6
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 2.5e-06 57.4 50 54.0
Ah.16g109390 Amaranthus hybridus HOM05D000004 ORTHO05D000224 3.2e-06 57.0 92 34.8
Ah.16g109980 Amaranthus hybridus HOM05D000004 ORTHO05D000224 3.2e-06 57.0 92 34.8
Rhsim06G0127900 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.2e-06 57.0 119 31.1
Hund30124 Selenicereus undatus HOM05D000004 ORTHO05D000224 3.2e-06 57.0 84 33.3
Sopen00g001180 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 57.0 134 31.3
Sopen00g009040 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 57.0 124 30.6
BcaC06g35664 Brassica carinata HOM05D000415 ORTHO05D002017 4.2e-06 56.6 46 54.3
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.2e-06 56.6 137 30.7
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 4.2e-06 56.6 134 29.9
CSS0040660 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.2e-06 56.6 63 42.9
AUR62023936 Chenopodium quinoa HOM05D000047 ORTHO05D000044 5.5e-06 56.2 51 51.0
Oeu003508.1 Olea europaea HOM05D000004 ORTHO05D000034 5.5e-06 56.2 66 39.4
PSO339G2805 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-06 56.2 86 37.2
QL08p037947 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-06 56.2 44 59.1
Hund30497 Selenicereus undatus HOM05D000004 ORTHO05D000224 5.5e-06 56.2 65 40.0
TWI81G0819 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 5.5e-06 56.2 51 47.1
CSS0001178 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.2e-06 55.8 32 84.4
CSS0019167 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.2e-06 55.8 32 84.4
CSS0041006 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.2e-06 55.8 32 84.4
CSS0041706 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.2e-06 55.8 32 84.4
CSS0045991 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 7.2e-06 55.8 48 66.7
CANSAT83G0002 Cannabis sativa HOM05D000004 ORTHO05D000034 7.2e-06 55.8 99 36.4
MBI18_g08811_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 7.2e-06 55.8 73 38.4
Oeu027445.1 Olea europaea HOM05D000004 ORTHO05D000034 7.2e-06 55.8 80 35.0
Rhsim01G0081400 Rhododendron simsii HOM05D000004 ORTHO05D000034 7.2e-06 55.8 140 32.1
Rhsim02G0020600 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.2e-06 55.8 113 30.1
Sopen10g019780 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.8 64 40.6
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.4e-06 55.5 133 30.1
CSS0039774 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.4e-06 55.5 47 51.1
CANSAT11G0663 Cannabis sativa HOM05D000004 ORTHO05D000034 9.4e-06 55.5 114 31.6
AUR62042110 Chenopodium quinoa HOM05D000004 ORTHO05D000034 9.4e-06 55.5 84 33.3
Hund30446 Selenicereus undatus HOM05D000004 ORTHO05D000224 9.4e-06 55.5 84 34.5


User provided reference genes

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