Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011074 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 7.3e-75 283.9 150 100.0
CSS0010979 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 8.4e-31 137.5 126 65.9
CSS0048678 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 3.3e-27 125.6 76 89.5
Rhsim03G0085800 Rhododendron simsii HOM05D003364 ORTHO05D003795 4.2e-22 108.6 77 75.3
CSS0050150 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 6.0e-21 104.8 76 72.4
vmacro08805 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 8.7e-20 100.9 79 68.4
Dinv37357 Davidia involucrata HOM05D003364 ORTHO05D003795 1.5e-19 100.1 76 73.7
GSVIVG01033713001 Vitis vinifera HOM05D003364 ORTHO05D003795 1.9e-19 99.8 76 71.1
TAR633G2316 Trochodendron aralioides HOM05D003364 ORTHO05D003795 4.3e-19 98.6 76 71.1
Dinv35835 Davidia involucrata HOM05D003364 ORTHO05D003795 5.7e-19 98.2 76 76.3
vmacro07356 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 7.4e-19 97.8 76 71.1
TAR369G0566 Trochodendron aralioides HOM05D003364 ORTHO05D003795 8.2e-18 94.4 76 65.8
Duzib128G0277 Durio zibethinus HOM05D003364 ORTHO05D003795 1.1e-17 94.0 75 68.0
Manes.09G048862 Manihot esculenta HOM05D003364 ORTHO05D003795 3.1e-17 92.4 76 65.8
QL07p041392 Quercus lobata HOM05D003364 ORTHO05D003795 5.3e-17 91.7 76 67.1
SalBow3G4042 Salvia bowleyana HOM05D003364 ORTHO05D003795 5.3e-17 91.7 75 65.3
Thecc.05G075500 Theobroma cacao HOM05D003364 ORTHO05D003795 5.3e-17 91.7 76 67.1
Duzib106G1154 Durio zibethinus HOM05D003364 ORTHO05D003795 2.6e-16 89.4 76 63.2
Nitab4.5_0009839g0030 Nicotiana tabacum HOM05D003364 ORTHO05D003795 2.6e-16 89.4 76 68.4
COL.COLO4_22254 Corchorus olitorius HOM05D003364 ORTHO05D003795 4.5e-16 88.6 76 65.8
CiPaw.10G002500 Carya illinoinensis HOM05D003364 ORTHO05D003795 1.0e-15 87.4 76 64.5
Cc06_g04780 Coffea canephora HOM05D003364 ORTHO05D003795 1.7e-15 86.7 76 64.5
Rhsim04G0138800 Rhododendron simsii HOM05D003364 ORTHO05D003795 1.7e-15 86.7 74 62.2
Manes.08G015900 Manihot esculenta HOM05D003364 ORTHO05D003795 3.8e-15 85.5 77 63.6
MSTRG.5787 Avicennia marina HOM05D003364 ORTHO05D003795 5.0e-15 85.1 76 61.8
Gohir.D04G106900 Gossypium hirsutum HOM05D003364 ORTHO05D003795 8.5e-15 84.3 76 61.8
Gorai.009G411000 Gossypium raimondii HOM05D003364 ORTHO05D003795 8.5e-15 84.3 76 61.8
Prupe.7G123000 Prunus persica HOM05D003364 ORTHO05D003795 8.5e-15 84.3 77 61.0
Gohir.A04G068400 Gossypium hirsutum HOM05D003364 ORTHO05D003795 1.1e-14 84.0 76 61.8
EL10Ac7g16703 Beta vulgaris HOM05D003364 ORTHO05D003795 1.4e-14 83.6 75 58.7
Lj3A995G63 Lonicera japonica HOM05D003364 ORTHO05D003795 1.4e-14 83.6 76 67.1
Nitab4.5_0000725g0070 Nicotiana tabacum HOM05D003364 ORTHO05D003795 1.4e-14 83.6 76 65.8
QL07p041377 Quercus lobata HOM05D003364 ORTHO05D003795 1.4e-14 83.6 71 66.2
MD14G1097000 Malus domestica HOM05D003364 ORTHO05D003795 1.9e-14 83.2 80 58.8
Duzib093G1696 Durio zibethinus HOM05D003364 ORTHO05D003795 2.5e-14 82.8 76 63.2
SGA_v2.0_scaffold40G15447 Striga asiatica HOM05D003364 ORTHO05D003795 2.5e-14 82.8 76 57.9
EL10As10g23959 Beta vulgaris HOM05D003364 ORTHO05D003795 3.2e-14 82.4 75 57.3
MD12G1102900 Malus domestica HOM05D003364 ORTHO05D003795 4.2e-14 82.0 80 57.5
Lj1A203T55 Lonicera japonica HOM05D003364 ORTHO05D003795 5.5e-14 81.6 74 63.5
Sc20g0005750 Simmondsia chinensis HOM05D003364 ORTHO05D003795 5.5e-14 81.6 76 57.9
AUR62030232 Chenopodium quinoa HOM05D003364 ORTHO05D003795 9.3e-14 80.9 76 55.3
CiPaw.09G005100 Carya illinoinensis HOM05D003364 ORTHO05D003795 1.2e-13 80.5 76 60.5
AUR62040195 Chenopodium quinoa HOM05D003364 ORTHO05D003795 1.2e-13 80.5 76 55.3
Ciclev10009355m.g Citrus clementina HOM05D003364 ORTHO05D003795 1.6e-13 80.1 76 59.2
Oeu031866.1 Olea europaea HOM05D003364 ORTHO05D003795 1.6e-13 80.1 75 64.0
Gohir.D11G342100 Gossypium hirsutum HOM05D003364 ORTHO05D003795 2.1e-13 79.7 76 60.5
Gorai.007G372100 Gossypium raimondii HOM05D003364 ORTHO05D003795 2.1e-13 79.7 76 60.5
DCAR_020798 Daucus carota HOM05D003364 ORTHO05D003795 2.7e-13 79.3 75 64.0
TWI77G0900 Tripterygium wilfordii HOM05D003364 ORTHO05D003795 4.6e-13 78.6 76 60.5
Hund12309 Selenicereus undatus HOM05D003364 ORTHO05D003795 7.9e-13 77.8 78 53.8
Oeu045244.1 Olea europaea HOM05D003364 ORTHO05D003795 1.0e-12 77.4 75 64.0
Haze_19478 Corylus avellana HOM05D003364 ORTHO05D003795 1.8e-12 76.6 76 57.9
AUR62042710 Chenopodium quinoa HOM05D003364 ORTHO05D003795 3.0e-12 75.9 76 53.9
TWI74G0085 Tripterygium wilfordii HOM05D003364 ORTHO05D003795 3.0e-12 75.9 76 59.2
Gohir.A11G323000 Gossypium hirsutum HOM05D003364 ORTHO05D003795 3.9e-12 75.5 76 57.9
Hma1.2p1_0970F.1_g242720 Hydrangea macrophylla HOM05D003364 ORTHO05D003795 3.9e-12 75.5 75 61.3
Peaxi162Scf00110g00816 Petunia axillaris HOM05D003364 ORTHO05D003795 5.1e-12 75.1 75 60.0
Nn6g35170 Nelumbo nucifera HOM05D003364 ORTHO05D003795 6.7e-12 74.7 87 54.0
Potri.016G097000 Populus trichocarpa HOM05D003364 ORTHO05D003795 8.8e-12 74.3 77 59.7
DCAR_017656 Daucus carota HOM05D003364 ORTHO05D003795 1.5e-11 73.6 76 59.2
Hma1.2p1_0137F.1_g062430 Hydrangea macrophylla HOM05D003364 ORTHO05D003795 2.5e-11 72.8 74 60.8
Potri.006G119200 Populus trichocarpa HOM05D003364 ORTHO05D003795 5.7e-11 71.6 80 60.0
Oeu040563.2 Olea europaea HOM05D003364 ORTHO05D003795 9.7e-11 70.9 76 56.6
Sc02g0001390 Simmondsia chinensis HOM05D003364 ORTHO05D003795 1.3e-10 70.5 76 55.3
MELO3C009407.2 Cucumis melo HOM05D003364 ORTHO05D003795 1.7e-10 70.1 76 59.2
CsaV3_3G036470 Cucumis sativus L. HOM05D003364 ORTHO05D003795 1.7e-10 70.1 76 59.2
Nitab4.5_0005208g0010 Nicotiana tabacum HOM05D003364 ORTHO05D003795 2.2e-10 69.7 88 54.5
unitig_22.g5108 Utricularia gibba HOM05D003364 ORTHO05D003795 2.2e-10 69.7 97 47.4
ClCG10G019650 Citrullus lanatus HOM05D003364 ORTHO05D003795 3.7e-10 68.9 74 59.5
Eucgr.A01593 Eucalyptus grandis HOM05D003364 ORTHO05D003795 6.3e-10 68.2 76 56.6
HanXRQChr11g0345961 Helianthus annuus HOM05D003364 ORTHO05D003795 8.2e-10 67.8 71 59.2
HanXRQChr01g0019311 Helianthus annuus HOM05D003364 ORTHO05D003795 1.1e-09 67.4 76 61.8
Sed0015688 Sechium edule HOM05D003364 ORTHO05D003795 1.4e-09 67.0 76 56.6
Migut.J00474 Erythranthe guttata HOM05D003364 ORTHO05D003795 1.8e-09 66.6 76 57.9
Nn2g13901 Nelumbo nucifera HOM05D003364 ORTHO05D003795 1.8e-09 66.6 77 55.8
Migut.F01371 Erythranthe guttata HOM05D003364 ORTHO05D003795 2.4e-09 66.2 76 56.6
Migut.J00476 Erythranthe guttata HOM05D003364 ORTHO05D003795 2.4e-09 66.2 76 57.9
Sed0022654 Sechium edule HOM05D003364 ORTHO05D003795 3.1e-09 65.9 76 55.3
MBI11_g29030_MAGBIO Magnolia biondii HOM05D003364 ORTHO05D003795 4.1e-09 65.5 98 50.0
PGSC0003DMG400008590 Solanum tuberosum HOM05D003364 ORTHO05D003795 4.1e-09 65.5 76 53.9
vmacro23001 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 5.3e-09 65.1 51 72.5
Zm00001eb006510 Zea mays HOM05D003364 ORTHO05D003795 5.3e-09 65.1 79 55.7
Cpa.g.sc5.126 Carica papaya HOM05D003364 ORTHO05D003795 1.5e-08 63.5 77 53.2
Peaxi162Scf00146g00018 Petunia axillaris HOM05D003364 ORTHO05D003795 1.5e-08 63.5 71 60.6
CAN.G541.25 Capsicum annuum HOM05D003364 ORTHO05D003795 3.4e-08 62.4 72 55.6
Aqoxy5G02878 Aquilegia oxysepala HOM05D003364 ORTHO05D003795 4.5e-08 62.0 78 56.4
PGR142G3973 Punica granatum HOM05D003364 ORTHO05D003795 4.5e-08 62.0 76 52.6
Aqoxy2G01564 Aquilegia oxysepala HOM05D003364 ORTHO05D003795 1.3e-07 60.5 78 53.8
CAN.G729.4 Capsicum annuum HOM05D003364 ORTHO05D003795 1.7e-07 60.1 78 48.7
Solyc10g083780.1 Solanum lycopersicum HOM05D003364 ORTHO05D003795 1.7e-07 60.1 74 54.1
Sopen10g033230 Solanum pennellii HOM05D003364 ORTHO05D003795 1.7e-07 60.1 74 54.1
ECA248G1326 Erigeron canadensis HOM05D003364 ORTHO05D003795 2.2e-07 59.7 76 53.9
Sabra06G0093800 Salix brachista HOM05D003364 ORTHO05D003795 2.2e-07 59.7 79 49.4
Solyc10g085810.2 Solanum lycopersicum HOM05D003364 ORTHO05D003795 2.9e-07 59.3 74 52.7
Sopen10g035210 Solanum pennellii HOM05D003364 ORTHO05D003795 2.9e-07 59.3 74 52.7
PGSC0003DMG400028179 Solanum tuberosum HOM05D003364 ORTHO05D003795 6.5e-07 58.2 75 52.0
Actinidia32470 Actinidia chinensis HOM05D003364 ORTHO05D003795 8.5e-07 57.8 76 48.7
VMungo1383G1043 Vigna mungo HOM05D003364 ORTHO05D003795 8.5e-07 57.8 76 53.9
Phvul.001G183500 Phaseolus vulgaris HOM05D003364 ORTHO05D003795 2.5e-06 56.2 76 51.3
arahy.Tifrunner.gnm1.ann1.PZQ5IT Arachis hypogaea HOM05D003364 ORTHO05D003795 4.2e-06 55.5 76 48.7
arahy.Tifrunner.gnm1.ann1.URL2CG Arachis hypogaea HOM05D003364 ORTHO05D003795 4.2e-06 55.5 76 48.7
unitig_8.g4120 Utricularia gibba HOM05D003364 ORTHO05D003795 7.2e-06 54.7 59 49.2


User provided reference genes

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