Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011066 Camellia sinensis var. sinensis HOM05D008779 ORTHO05D010486 3.0e-92 342.0 200 100.0
RcHm_v2.0_Chr3g0461831 Rosa chinensis HOM05D008779 ORTHO05D010486 1.3e-15 87.4 112 49.1
Cc06_g00910 Coffea canephora HOM05D008779 ORTHO05D010486 5.6e-14 82.0 200 37.5
CiPaw.09G213700 Carya illinoinensis HOM05D008779 ORTHO05D010486 7.3e-14 81.6 184 45.7
FAN05G1839 Fragaria x ananassa HOM05D008779 ORTHO05D010486 1.1e-12 77.8 178 36.0
FAN05G2483 Fragaria x ananassa HOM05D008779 ORTHO05D010486 1.1e-12 77.8 178 36.0
Duzib106G0962 Durio zibethinus HOM05D020259 ORTHO05D010486 2.4e-12 76.6 185 44.3
Thecc.05G008600 Theobroma cacao HOM05D020259 ORTHO05D010486 2.4e-12 76.6 188 42.0
FvH4_6g10791 Fragaria vesca HOM05D008779 ORTHO05D010486 3.1e-12 76.3 182 37.9
FAN09G1051 Fragaria x ananassa HOM05D008779 ORTHO05D010486 8.9e-12 74.7 201 35.3
Hma1.2p1_0479F.1_g161570 Hydrangea macrophylla HOM05D008779 ORTHO05D010486 3.4e-11 72.8 204 34.3
Glyma.07G154700 Glycine max HOM05D008779 ORTHO05D010486 1.9e-09 67.0 108 41.7
Potri.006G103600 Populus trichocarpa HOM05D008779 ORTHO05D010486 1.9e-09 67.0 209 40.7
Nn2g10979 Nelumbo nucifera HOM05D008779 ORTHO05D010486 2.4e-09 66.6 111 45.0
Nitab4.5_0000230g0080 Nicotiana tabacum HOM05D020890 ORTHO05D010486 4.1e-09 65.9 207 40.1
SGA_v2.0_scaffold110G31193 Striga asiatica HOM05D008779 ORTHO05D010486 5.4e-09 65.5 112 44.6
Oeu038727.1 Olea europaea HOM05D008779 ORTHO05D010486 9.2e-09 64.7 200 34.5
Prupe.6G283500 Prunus persica HOM05D008779 ORTHO05D010486 9.2e-09 64.7 187 38.5
MSTRG.26830 Avicennia marina HOM05D008779 ORTHO05D010486 4.6e-08 62.4 105 41.0
Ca_07682_v3 Cicer arietinum L. HOM05D008779 ORTHO05D010486 7.8e-08 61.6 202 33.2
PGSC0003DMG400029193 Solanum tuberosum HOM05D020890 ORTHO05D010486 7.8e-08 61.6 140 34.3
Ciclev10013473m.g Citrus clementina HOM05D008779 ORTHO05D010486 1.7e-07 60.5 215 33.5
Sopen09g009150 Solanum pennellii HOM05D020890 ORTHO05D010486 3.9e-07 59.3 112 37.5
Cpa.g.sc5.219 Carica papaya HOM05D008779 ORTHO05D010486 5.1e-07 58.9 124 41.1
Glyma.18G205400 Glycine max HOM05D008779 ORTHO05D010486 6.6e-07 58.5 213 29.1
Actinidia32534 Actinidia chinensis HOM05D008779 ORTHO05D010486 8.7e-07 58.2 198 37.9
PSO801G0115 Papaver somniferum HOM05D062527 ORTHO05D050229 8.7e-07 58.2 205 35.1
Solyc09g015450.3 Solanum lycopersicum HOM05D020890 ORTHO05D010486 1.1e-06 57.8 112 35.7
QL07p034176 Quercus lobata HOM05D008779 ORTHO05D010486 1.9e-06 57.0 195 30.8
PSO339G0856 Papaver somniferum HOM05D062527 ORTHO05D050229 2.5e-06 56.6 236 30.1
Phvul.008G094100 Phaseolus vulgaris HOM05D008779 ORTHO05D010486 2.5e-06 56.6 87 39.1
Sabra16G0118800 Salix brachista HOM05D008779 ORTHO05D010486 2.5e-06 56.6 35 71.4
Psat3g124920 Pisum sativum HOM05D008779 ORTHO05D010486 4.3e-06 55.8 82 47.6
HanXRQChr01g0006341 Helianthus annuus HOM05D034147 ORTHO05D010486 5.6e-06 55.5 79 36.7


User provided reference genes

Program Settings