Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011042 Camellia sinensis var. sinensis HOM05D006146 ORTHO05D007924 3.6e-205 718.0 361 100.0
CSS0015893 Camellia sinensis var. sinensis HOM05D006146 ORTHO05D007924 2.3e-199 698.7 383 93.7
CSS0000590 Camellia sinensis var. sinensis HOM05D006146 ORTHO05D007924 4.1e-156 555.1 497 64.6
CSS0012094 Camellia sinensis var. sinensis HOM05D006146 ORTHO05D007924 4.1e-156 555.1 497 64.6
CSS0039643 Camellia sinensis var. sinensis HOM05D006146 ORTHO05D007924 6.1e-128 461.5 424 63.7
vmacro20300 Vaccinium macrocarpon HOM05D006146 ORTHO05D007924 5.2e-127 458.4 506 54.0
Dinv16910 Davidia involucrata HOM05D006146 ORTHO05D007924 1.9e-121 439.9 503 53.5
Cfa017174 Carpinus fangiana HOM05D006146 ORTHO05D007924 3.5e-115 419.1 505 50.3
Cc06_g01080 Coffea canephora HOM05D006146 ORTHO05D007924 1.7e-114 416.8 502 50.8
Lj2C71G10 Lonicera japonica HOM05D003030 ORTHO05D003610 8.0e-112 407.9 506 49.6
Dinv13137 Davidia involucrata HOM05D006146 ORTHO05D007924 6.8e-111 404.8 495 50.5
Peaxi162Scf01132g00127 Petunia axillaris HOM05D006146 ORTHO05D007924 4.4e-110 402.1 505 49.5
COL.COLO4_14502 Corchorus olitorius HOM05D006146 ORTHO05D007924 4.9e-109 398.7 402 57.2
CiPaw.09G211700 Carya illinoinensis HOM05D006146 ORTHO05D007924 1.1e-108 397.5 498 48.8
TAR636G3413 Trochodendron aralioides HOM05D006146 ORTHO05D007924 1.3e-106 390.6 502 48.6
RcHm_v2.0_Chr3g0462541 Rosa chinensis HOM05D006146 ORTHO05D007924 8.6e-106 387.9 503 47.5
Prupe.6G280600 Prunus persica HOM05D006146 ORTHO05D007924 1.9e-105 386.7 504 47.0
Ciclev10011366m.g Citrus clementina HOM05D006146 ORTHO05D007924 2.5e-105 386.3 501 47.9
TWI53G1621 Tripterygium wilfordii HOM05D006146 ORTHO05D007924 4.3e-105 385.6 512 47.3
Manes.08G094300 Manihot esculenta HOM05D006146 ORTHO05D007924 2.1e-104 383.3 503 47.7
QL07p034872 Quercus lobata HOM05D006146 ORTHO05D007924 2.3e-103 379.8 500 46.6
PGSC0003DMG400006271 Solanum tuberosum HOM05D006146 ORTHO05D007924 4.0e-103 379.0 515 46.2
Nn2g10908 Nelumbo nucifera HOM05D006146 ORTHO05D007924 2.0e-102 376.7 502 47.0
Haze_21031 Corylus avellana HOM05D006146 ORTHO05D007924 2.6e-102 376.3 504 47.2
Thecc.05G012100 Theobroma cacao HOM05D006146 ORTHO05D007924 4.4e-102 375.6 513 46.2
CANSAT35G1531 Cannabis sativa HOM05D006146 ORTHO05D007924 5.8e-102 375.2 510 46.1
FAN14G4754 Fragaria x ananassa HOM05D006146 ORTHO05D007924 9.8e-102 374.4 503 46.1
MD00G1062300 Malus domestica HOM05D006146 ORTHO05D007924 1.3e-101 374.0 502 46.0
ECA236G4528 Erigeron canadensis HOM05D006146 ORTHO05D007924 3.7e-101 372.5 501 46.9
Aqoxy4G02469 Aquilegia oxysepala HOM05D006146 ORTHO05D007924 8.3e-101 371.3 502 46.2
FAN02G2047 Fragaria x ananassa HOM05D006146 ORTHO05D007924 8.3e-101 371.3 503 45.7
FvH4_6g11110 Fragaria vesca HOM05D006146 ORTHO05D007924 1.9e-100 370.2 503 45.9
Oeu042663.2 Olea europaea HOM05D006146 ORTHO05D007924 4.1e-100 369.0 505 46.9
Rhsim05G0219200 Rhododendron simsii HOM05D006146 ORTHO05D007924 5.4e-100 368.6 272 69.1
CAN.G133.15 Capsicum annuum HOM05D006146 ORTHO05D007924 7.1e-100 368.2 504 45.8
Gorai.006G183800 Gossypium raimondii HOM05D006146 ORTHO05D007924 9.2e-100 367.9 516 45.0
SGA_v2.0_scaffold85G26717 Striga asiatica HOM05D006146 ORTHO05D007924 1.2e-99 367.5 515 45.2
Gohir.A09G166500 Gossypium hirsutum HOM05D006146 ORTHO05D007924 1.6e-99 367.1 516 45.2
Gohir.D09G162100 Gossypium hirsutum HOM05D006146 ORTHO05D007924 4.6e-99 365.5 516 44.6
FAN05G4820 Fragaria x ananassa HOM05D006146 ORTHO05D007924 6.0e-99 365.2 502 45.8
MBI03_g05510_MAGBIO Magnolia biondii HOM05D006146 ORTHO05D007924 1.3e-98 364.0 503 45.9
MD12G1172300 Malus domestica HOM05D006146 ORTHO05D007924 1.7e-98 363.6 504 45.6
Sopen09g001100 Solanum pennellii HOM05D006146 ORTHO05D007924 6.6e-98 361.7 505 45.3
Solyc09g005120.3 Solanum lycopersicum HOM05D006146 ORTHO05D007924 3.3e-97 359.4 505 45.1
PSO384G0066 Papaver somniferum HOM05D006146 ORTHO05D007924 5.6e-97 358.6 505 46.1
Atru.chr8.2278 Acer truncatum HOM05D006146 ORTHO05D007924 6.8e-95 351.7 502 45.4
PSO339G2519 Papaver somniferum HOM05D006146 ORTHO05D007924 1.2e-94 350.9 505 45.1
Hma1.2p1_0362F.1_g136590 Hydrangea macrophylla HOM05D006146 ORTHO05D007924 2.0e-94 350.1 269 68.8
Hund14889 Selenicereus undatus HOM05D006146 ORTHO05D007924 3.4e-94 349.4 508 43.7
Lsat_1_v5_gn_8_100801 Lactuca sativa HOM05D006146 ORTHO05D007924 5.8e-94 348.6 496 44.2
Lj1g0005300 Lotus japonicus HOM05D006146 ORTHO05D007924 1.7e-93 347.1 503 44.5
Eucgr.A00545 Eucalyptus grandis HOM05D006146 ORTHO05D007924 8.4e-93 344.7 463 47.5
Glyma.18G204000 Glycine max HOM05D006146 ORTHO05D007924 1.9e-92 343.6 500 44.8
MSTRG.5562 Avicennia marina HOM05D006146 ORTHO05D007924 7.1e-92 341.7 505 44.0
Gorai.012G116800 Gossypium raimondii HOM05D006146 ORTHO05D007924 9.2e-92 341.3 508 43.7
Hma1.2p1_0362F.1_g136580 Hydrangea macrophylla HOM05D006146 ORTHO05D007924 1.2e-91 340.9 282 65.6
Gohir.A04G093600 Gossypium hirsutum HOM05D006146 ORTHO05D007924 1.6e-91 340.5 508 44.1
ClCG10G022330 Citrullus lanatus HOM05D006146 ORTHO05D007924 6.0e-91 338.6 501 43.3
THA.LOC104816204 Tarenaya hassleriana HOM05D006146 ORTHO05D007924 1.3e-90 337.4 496 42.9
SalBow5G2678 Salvia bowleyana HOM05D006146 ORTHO05D007924 1.7e-90 337.0 495 43.4
Psat3g126240 Pisum sativum HOM05D006146 ORTHO05D007924 2.3e-90 336.7 504 44.2
GSVIVG01003939001 Vitis vinifera HOM05D006146 ORTHO05D007924 2.3e-90 336.7 276 62.7
Carub.0003s0810 Capsella rubella HOM05D006146 ORTHO05D007924 3.9e-90 335.9 502 42.6
Sed0026013 Sechium edule HOM05D006146 ORTHO05D007924 2.5e-89 333.2 502 42.2
Ah.12g058880 Amaranthus hybridus HOM05D006146 ORTHO05D007924 3.3e-89 332.8 532 40.8
CSS0031746 Camellia sinensis var. sinensis HOM05D006146 ORTHO05D007924 3.3e-89 332.8 428 52.8
Eucgr.A00544 Eucalyptus grandis HOM05D006146 ORTHO05D007924 5.6e-89 332.0 505 43.6
arahy.Tifrunner.gnm1.ann1.D29HQK Arachis hypogaea HOM05D006146 ORTHO05D007924 9.6e-89 331.3 522 41.8
Potri.016G120000 Populus trichocarpa HOM05D006146 ORTHO05D007924 2.1e-88 330.1 271 63.5
HanXRQChr12g0383181 Helianthus annuus HOM05D006146 ORTHO05D007924 3.6e-88 329.3 508 41.9
Nitab4.5_0000195g0240 Nicotiana tabacum HOM05D006146 ORTHO05D007924 6.2e-88 328.6 485 44.1
arahy.Tifrunner.gnm1.ann1.S46L09 Arachis hypogaea HOM05D006146 ORTHO05D007924 1.8e-87 327.0 521 41.5
MELO3C009146.2 Cucumis melo HOM05D006146 ORTHO05D007924 2.4e-87 326.6 499 43.3
Nitab4.5_0003654g0010 Nicotiana tabacum HOM05D006146 ORTHO05D007924 8.9e-87 324.7 272 61.8
Migut.J00133 Erythranthe guttata HOM05D006146 ORTHO05D007924 1.2e-86 324.3 503 43.3
CsaV3_3G033560 Cucumis sativus L. HOM05D006146 ORTHO05D007924 1.5e-86 323.9 498 42.4
EL10Ac5g12530 Beta vulgaris HOM05D006146 ORTHO05D007924 2.2e-85 320.1 503 40.4
AUR62030469 Chenopodium quinoa HOM05D006146 ORTHO05D007924 2.9e-85 319.7 514 40.7
Medtr7g069480 Medicago truncatula HOM05D006146 ORTHO05D007924 2.9e-85 319.7 495 43.2
AT3G08970 Arabidopsis thaliana HOM05D006146 ORTHO05D007924 4.9e-85 318.9 503 41.9
Thhalv10020374m.g Eutrema salsugineum HOM05D006146 ORTHO05D007924 4.9e-85 318.9 506 40.9
Glyma.07G152900 Glycine max HOM05D006146 ORTHO05D007924 4.9e-85 318.9 503 42.9
AL3G19990 Arabidopsis lyrata HOM05D006146 ORTHO05D007924 1.9e-84 317.0 504 40.3
CARHR083310 Cardamine hirsuta HOM05D006146 ORTHO05D007924 1.0e-82 311.2 491 42.2
AUR62010446 Chenopodium quinoa HOM05D006146 ORTHO05D007924 1.7e-82 310.5 512 39.8
VMungo1383G3422 Vigna mungo HOM05D006146 ORTHO05D007924 1.1e-81 307.8 516 41.9
Sc22g0002570 Simmondsia chinensis HOM05D006146 ORTHO05D007924 4.3e-81 305.8 272 58.5
Actinidia11568 Actinidia chinensis HOM05D006146 ORTHO05D007924 1.8e-79 300.4 497 41.9
TPR.G35447 Trifolium pratense HOM05D006146 ORTHO05D007924 1.8e-79 300.4 492 42.9
C05p58910 Brassica napus HOM05D006146 ORTHO05D007924 3.1e-79 299.7 272 56.6
Lalb_Chr03g0043371 Lupinus albus HOM05D006146 ORTHO05D007924 3.1e-79 299.7 511 40.5
BolC5t34544H Brassica oleracea HOM05D006146 ORTHO05D007924 9.0e-79 298.1 272 55.9
Ca_07664_v3 Cicer arietinum L. HOM05D006146 ORTHO05D007924 1.2e-78 297.7 462 42.9
Phvul.008G095600 Phaseolus vulgaris HOM05D006146 ORTHO05D007924 1.5e-78 297.4 314 54.8
Sp3g07390 Schrenkiella parvula HOM05D006146 ORTHO05D007924 4.5e-78 295.8 504 38.9
unitig_578.g15902 Utricularia gibba HOM05D003030 ORTHO05D003610 4.5e-78 295.8 500 40.2
BraA05t22771Z Brassica rapa HOM05D006146 ORTHO05D007924 5.8e-78 295.4 272 55.5
PGR031G2778 Punica granatum HOM05D006146 ORTHO05D007924 7.6e-78 295.0 522 39.1
A05p39870 Brassica napus HOM05D006146 ORTHO05D007924 1.3e-77 294.3 272 54.4
HPP92_025101 Vanilla planifolia HOM05D006146 ORTHO05D007924 3.8e-77 292.7 499 38.7
Aa31LG5G18940 Aethionema arabicum HOM05D006146 ORTHO05D007924 4.9e-77 292.4 490 40.2
Zm00001eb396940 Zea mays HOM05D006146 ORTHO05D007924 1.9e-76 290.4 511 38.6
CDE06G0106 Ceratophyllum demersum HOM05D003030 ORTHO05D003610 2.7e-75 286.6 506 38.3
Gohir.D04G132900 Gossypium hirsutum HOM05D006146 ORTHO05D007924 6.7e-74 282.0 271 57.6
CSS0030843 Camellia sinensis var. sinensis HOM05D006146 ORTHO05D007924 2.5e-73 280.0 348 52.0
DCAR_015389 Daucus carota HOM05D006146 ORTHO05D007924 1.4e-71 274.2 488 41.4
ATR0681G078 Amborella trichopoda HOM05D006146 ORTHO05D007924 2.4e-71 273.5 505 38.2
SHI12853 Sapria himalayana HOM05D006146 ORTHO05D007924 1.5e-70 270.8 495 38.8
Os03g0293000 Oryza sativa ssp. japonica HOM05D006146 ORTHO05D007924 5.5e-68 262.3 500 35.4
BcaC05g29631 Brassica carinata HOM05D006146 ORTHO05D007924 1.9e-65 253.8 449 38.3
Glyma.16G098700 Glycine max HOM05D006146 ORTHO05D007924 5.6e-65 252.3 231 60.6
QL08p015836 Quercus lobata HOM05D006146 ORTHO05D007924 6.9e-63 245.4 268 53.0
Sabra16G0115900 Salix brachista HOM05D006146 ORTHO05D007924 4.2e-60 236.1 486 35.8
FAN09G2516 Fragaria x ananassa HOM05D006146 ORTHO05D007924 7.9e-59 231.9 216 57.4
Cpa.g.sc120.50 Carica papaya HOM05D006146 ORTHO05D007924 7.4e-57 225.3 213 57.3
Hund10972 Selenicereus undatus HOM05D006146 ORTHO05D007924 1.2e-51 208.0 214 54.2
SEGI_31782 Sequoiadendron giganteum HOM05D006146 ORTHO05D007924 6.1e-51 205.7 305 41.0
AagrBONN_evm.TU.Sc2ySwM_228.96 Anthoceros agrestis HOM05D006146 ORTHO05D007924 3.4e-38 163.3 263 35.7
Mapoly0184s0019 Marchantia polymorpha HOM05D006146 ORTHO05D007924 2.3e-34 150.6 278 34.2
Hund10973 Selenicereus undatus HOM05D006146 ORTHO05D007924 4.1e-31 139.8 296 35.8
QL07p034801 Quercus lobata HOM05D006146 ORTHO05D007924 8.5e-29 132.1 279 38.4
Pp3c20_14730 Physcomitrium patens HOM05D006146 ORTHO05D007924 4.2e-28 129.8 237 33.3
SMO347G0184 Selaginella moellendorffii HOM05D006146 ORTHO05D007924 3.6e-27 126.7 264 31.1
Zm00001eb225170 Zea mays HOM05D006146 ORTHO05D007924 1.3e-24 118.2 162 43.8
Rhsim01G0279400 Rhododendron simsii HOM05D000036 ORTHO05D005472 3.8e-21 106.7 76 67.1
Zm00001eb032720 Zea mays HOM05D006146 ORTHO05D007924 4.2e-20 103.2 180 37.8
Thecc.05G011800 Theobroma cacao HOM05D006146 ORTHO05D007924 1.0e-18 98.6 79 58.2
Haze_20655 Corylus avellana HOM05D006146 ORTHO05D007924 5.2e-18 96.3 82 65.9
Rhsim05G0215400 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.2e-18 96.3 106 50.9
CBR_g38983 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-09 68.2 100 43.0
Rhsim05G0219400 Rhododendron simsii HOM05D006146 ORTHO05D007924 7.5e-09 65.9 58 58.6


User provided reference genes

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